RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 PRG4Q92954 1404 aaPredicted RBP24.55■■□□□ 1.52
RPRD1B-206ENST00000495457 CUL7Q14999 1698 aa24.54■■□□□ 1.52
RPRD1B-206ENST00000495457 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
RPRD1B-206ENST00000495457 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
RPRD1B-206ENST00000495457 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
RPRD1B-206ENST00000495457 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
RPRD1B-206ENST00000495457 TTBK1Q5TCY1 1321 aaPredicted RBP24.22■■□□□ 1.47
RPRD1B-206ENST00000495457 ADCY10Q96PN6 1610 aa24.21■■□□□ 1.47
RPRD1B-206ENST00000495457 PTPRGP23470 1445 aa24.2■■□□□ 1.46
RPRD1B-206ENST00000495457 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
RPRD1B-206ENST00000495457 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
RPRD1B-206ENST00000495457 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
RPRD1B-206ENST00000495457 DISP1Q96F81 1524 aa24.16■■□□□ 1.46
RPRD1B-206ENST00000495457 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
RPRD1B-206ENST00000495457 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
RPRD1B-206ENST00000495457 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
RPRD1B-206ENST00000495457 ABCC10Q5T3U5 1492 aa24.08■■□□□ 1.45
RPRD1B-206ENST00000495457 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
RPRD1B-206ENST00000495457 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
RPRD1B-206ENST00000495457 KIAA0556O60303 1618 aa24.04■■□□□ 1.44
RPRD1B-206ENST00000495457 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
RPRD1B-206ENST00000495457 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
RPRD1B-206ENST00000495457 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
RPRD1B-206ENST00000495457 ABCC2Q92887 1545 aa24.02■■□□□ 1.44
RPRD1B-206ENST00000495457 DIP2BQ9P265 1576 aa24.01■■□□□ 1.43
RPRD1B-206ENST00000495457 UHRF1BP1LA0JNW5 1464 aa24■■□□□ 1.43
RPRD1B-206ENST00000495457 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
RPRD1B-206ENST00000495457 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
RPRD1B-206ENST00000495457 EEA1Q15075 1411 aa23.93■■□□□ 1.42
RPRD1B-206ENST00000495457 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
RPRD1B-206ENST00000495457 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
RPRD1B-206ENST00000495457 PLB1Q6P1J6 1458 aa23.89■■□□□ 1.42
RPRD1B-206ENST00000495457 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
RPRD1B-206ENST00000495457 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
RPRD1B-206ENST00000495457 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
RPRD1B-206ENST00000495457 ABCA8O94911 1581 aa23.82■■□□□ 1.4
RPRD1B-206ENST00000495457 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
RPRD1B-206ENST00000495457 GLI2P10070 1586 aa23.78■■□□□ 1.4
RPRD1B-206ENST00000495457 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
RPRD1B-206ENST00000495457 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
RPRD1B-206ENST00000495457 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
RPRD1B-206ENST00000495457 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
RPRD1B-206ENST00000495457 KDM6BO15054 1643 aa23.72■■□□□ 1.39
RPRD1B-206ENST00000495457 KIF21BO75037 1637 aa23.72■■□□□ 1.39
RPRD1B-206ENST00000495457 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
RPRD1B-206ENST00000495457 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
RPRD1B-206ENST00000495457 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
RPRD1B-206ENST00000495457 MAP3K4Q9Y6R4 1608 aa23.66■■□□□ 1.38
RPRD1B-206ENST00000495457 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
RPRD1B-206ENST00000495457 FHOD3Q2V2M9 1422 aa23.66■■□□□ 1.38
RPRD1B-206ENST00000495457 ATP10BO94823 1461 aa23.64■■□□□ 1.38
RPRD1B-206ENST00000495457 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
RPRD1B-206ENST00000495457 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
RPRD1B-206ENST00000495457 COL17A1Q9UMD9 1497 aaPredicted RBP23.59■■□□□ 1.37
RPRD1B-206ENST00000495457 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
RPRD1B-206ENST00000495457 TEX14Q8IWB6 1497 aa23.58■■□□□ 1.37
RPRD1B-206ENST00000495457 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
RPRD1B-206ENST00000495457 NUP153P49790 1475 aaKnown RBP23.56■■□□□ 1.36
RPRD1B-206ENST00000495457 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
RPRD1B-206ENST00000495457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
RPRD1B-206ENST00000495457 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
RPRD1B-206ENST00000495457 MAGI3Q5TCQ9 1506 aa23.52■■□□□ 1.36
RPRD1B-206ENST00000495457 CFAP43Q8NDM7 1665 aa23.51■■□□□ 1.35
RPRD1B-206ENST00000495457 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
RPRD1B-206ENST00000495457 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
RPRD1B-206ENST00000495457 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
RPRD1B-206ENST00000495457 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.33
RPRD1B-206ENST00000495457 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
RPRD1B-206ENST00000495457 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
RPRD1B-206ENST00000495457 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
RPRD1B-206ENST00000495457 ARAP3Q8WWN8 1544 aa23.32■■□□□ 1.32
RPRD1B-206ENST00000495457 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
RPRD1B-206ENST00000495457 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
RPRD1B-206ENST00000495457 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
RPRD1B-206ENST00000495457 NEO1Q92859 1461 aa23.27■■□□□ 1.32
RPRD1B-206ENST00000495457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.27■■□□□ 1.322e-8■□□□□ 9.5
RPRD1B-206ENST00000495457 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
RPRD1B-206ENST00000495457 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
RPRD1B-206ENST00000495457 FANCAO15360 1455 aa23.18■■□□□ 1.3
RPRD1B-206ENST00000495457 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
RPRD1B-206ENST00000495457 CLIP1P30622 1438 aa23.17■■□□□ 1.3
RPRD1B-206ENST00000495457 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
RPRD1B-206ENST00000495457 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
RPRD1B-206ENST00000495457 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
RPRD1B-206ENST00000495457 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
RPRD1B-206ENST00000495457 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.3
RPRD1B-206ENST00000495457 TROQ12816 1431 aaPredicted RBP23.14■■□□□ 1.29
RPRD1B-206ENST00000495457 PLCH2O75038 1416 aa23.13■■□□□ 1.29
RPRD1B-206ENST00000495457 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
RPRD1B-206ENST00000495457 KIF14Q15058 1648 aa23.11■■□□□ 1.29
RPRD1B-206ENST00000495457 CFAP74Q9C0B2 1584 aa23.1■■□□□ 1.29
RPRD1B-206ENST00000495457 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
RPRD1B-206ENST00000495457 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
RPRD1B-206ENST00000495457 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
RPRD1B-206ENST00000495457 EFCAB2Q5VUJ9 269 aa23.04■■□□□ 1.28
RPRD1B-206ENST00000495457 SCAPERQ9BY12 1400 aa23.04■■□□□ 1.28
RPRD1B-206ENST00000495457 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
RPRD1B-206ENST00000495457 ARHGEF40Q8TER5 1519 aa23■■□□□ 1.27
RPRD1B-206ENST00000495457 POGZQ7Z3K3 1410 aa22.99■■□□□ 1.27
RPRD1B-206ENST00000495457 ZMYM4Q5VZL5 1548 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms