RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 IGF1RP08069 1367 aa25.82■■□□□ 1.72
PTPN18-216ENST00000495400 CUL7Q14999 1698 aa25.8■■□□□ 1.72
PTPN18-216ENST00000495400 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
PTPN18-216ENST00000495400 KIF13AQ9H1H9 1805 aa25.73■■□□□ 1.71
PTPN18-216ENST00000495400 NPM1P06748 294 aaKnown RBP eCLIP25.68■■□□□ 1.7
PTPN18-216ENST00000495400 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
PTPN18-216ENST00000495400 ADCY10Q96PN6 1610 aa25.63■■□□□ 1.69
PTPN18-216ENST00000495400 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
PTPN18-216ENST00000495400 MAPKBP1O60336 1514 aa25.61■■□□□ 1.69
PTPN18-216ENST00000495400 ABCC10Q5T3U5 1492 aa25.59■■□□□ 1.69
PTPN18-216ENST00000495400 FAM69CQ0P6D2 419 aa25.58■■□□□ 1.69
PTPN18-216ENST00000495400 PTPRGP23470 1445 aa25.53■■□□□ 1.68
PTPN18-216ENST00000495400 DIP2BQ9P265 1576 aa25.52■■□□□ 1.68
PTPN18-216ENST00000495400 CARMIL2Q6F5E8 1435 aa25.51■■□□□ 1.67
PTPN18-216ENST00000495400 IQGAP2Q13576 1575 aa25.5■■□□□ 1.67
PTPN18-216ENST00000495400 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
PTPN18-216ENST00000495400 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
PTPN18-216ENST00000495400 RAPGEF2Q9Y4G8 1499 aa25.42■■□□□ 1.66
PTPN18-216ENST00000495400 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
PTPN18-216ENST00000495400 ABCC2Q92887 1545 aa25.38■■□□□ 1.65
PTPN18-216ENST00000495400 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
PTPN18-216ENST00000495400 UHRF1BP1LA0JNW5 1464 aa25.34■■□□□ 1.65
PTPN18-216ENST00000495400 UGGT2Q9NYU1 1516 aa25.33■■□□□ 1.65
PTPN18-216ENST00000495400 UACAQ9BZF9 1416 aa25.33■■□□□ 1.65
PTPN18-216ENST00000495400 KDM6BO15054 1643 aa25.32■■□□□ 1.64
PTPN18-216ENST00000495400 ASXL2Q76L83 1435 aa25.3■■□□□ 1.64
PTPN18-216ENST00000495400 PLB1Q6P1J6 1458 aa25.3■■□□□ 1.64
PTPN18-216ENST00000495400 KIAA0556O60303 1618 aa25.27■■□□□ 1.64
PTPN18-216ENST00000495400 GLI2P10070 1586 aa25.25■■□□□ 1.63
PTPN18-216ENST00000495400 CTTNBP2Q8WZ74 1663 aa25.24■■□□□ 1.63
PTPN18-216ENST00000495400 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
PTPN18-216ENST00000495400 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
PTPN18-216ENST00000495400 ZCCHC11Q5TAX3 1644 aaKnown RBP25.18■■□□□ 1.62
PTPN18-216ENST00000495400 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
PTPN18-216ENST00000495400 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
PTPN18-216ENST00000495400 PRXQ9BXM0 1461 aa25.14■■□□□ 1.61
PTPN18-216ENST00000495400 MAP3K4Q9Y6R4 1608 aa25.11■■□□□ 1.61
PTPN18-216ENST00000495400 KDM4FA0A1W2PPD8 638 aa25.07■■□□□ 1.6
PTPN18-216ENST00000495400 TEX14Q8IWB6 1497 aa25.04■■□□□ 1.6
PTPN18-216ENST00000495400 WDR7Q9Y4E6 1490 aa25.04■■□□□ 1.6
PTPN18-216ENST00000495400 ABCA8O94911 1581 aa25.04■■□□□ 1.6
PTPN18-216ENST00000495400 COL17A1Q9UMD9 1497 aaPredicted RBP25■■□□□ 1.59
PTPN18-216ENST00000495400 CSRNP3Q8WYN3 585 aa24.96■■□□□ 1.59
PTPN18-216ENST00000495400 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.58
PTPN18-216ENST00000495400 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
PTPN18-216ENST00000495400 CFAP43Q8NDM7 1665 aa24.93■■□□□ 1.58
PTPN18-216ENST00000495400 P3H3Q8IVL6 736 aa24.91■■□□□ 1.58
PTPN18-216ENST00000495400 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
PTPN18-216ENST00000495400 MAGI3Q5TCQ9 1506 aa24.89■■□□□ 1.57
PTPN18-216ENST00000495400 ADGRL1O94910 1474 aa24.86■■□□□ 1.57
PTPN18-216ENST00000495400 SAMD9Q5K651 1589 aa24.85■■□□□ 1.57
PTPN18-216ENST00000495400 EEA1Q15075 1411 aa24.85■■□□□ 1.57
PTPN18-216ENST00000495400 ATP10BO94823 1461 aa24.83■■□□□ 1.57
PTPN18-216ENST00000495400 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
PTPN18-216ENST00000495400 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
PTPN18-216ENST00000495400 ABCA9Q8IUA7 1624 aa24.72■■□□□ 1.55
PTPN18-216ENST00000495400 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-216ENST00000495400 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
PTPN18-216ENST00000495400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.54
PTPN18-216ENST00000495400 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.54
PTPN18-216ENST00000495400 FHOD3Q2V2M9 1422 aa24.67■■□□□ 1.54
PTPN18-216ENST00000495400 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
PTPN18-216ENST00000495400 NUP153P49790 1475 aaKnown RBP24.66■■□□□ 1.54
PTPN18-216ENST00000495400 KIF21BO75037 1637 aa24.65■■□□□ 1.54
PTPN18-216ENST00000495400 EFCAB5A4FU69 1503 aa24.6■■□□□ 1.53
PTPN18-216ENST00000495400 NEO1Q92859 1461 aa24.59■■□□□ 1.53
PTPN18-216ENST00000495400 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
PTPN18-216ENST00000495400 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
PTPN18-216ENST00000495400 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
PTPN18-216ENST00000495400 UBTFP17480 764 aaKnown RBP24.48■■□□□ 1.51
PTPN18-216ENST00000495400 FRMPD1Q5SYB0 1578 aa24.48■■□□□ 1.51
PTPN18-216ENST00000495400 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
PTPN18-216ENST00000495400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.51
PTPN18-216ENST00000495400 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
PTPN18-216ENST00000495400 CFAP74Q9C0B2 1584 aa24.43■■□□□ 1.5
PTPN18-216ENST00000495400 ADAMTSL3P82987 1691 aa24.43■■□□□ 1.5
PTPN18-216ENST00000495400 AKNAQ7Z591 1439 aa24.43■■□□□ 1.5
PTPN18-216ENST00000495400 CDK13Q14004 1512 aaKnown RBP24.42■■□□□ 1.5
PTPN18-216ENST00000495400 FANCAO15360 1455 aa24.42■■□□□ 1.5
PTPN18-216ENST00000495400 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
PTPN18-216ENST00000495400 TTC37Q6PGP7 1564 aa24.41■■□□□ 1.5
PTPN18-216ENST00000495400 RICTORQ6R327 1708 aa24.41■■□□□ 1.5
PTPN18-216ENST00000495400 FMN1Q68DA7 1419 aa24.39■■□□□ 1.5
PTPN18-216ENST00000495400 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
PTPN18-216ENST00000495400 ARID4BQ4LE39 1312 aaPredicted RBP24.37■■□□□ 1.49
PTPN18-216ENST00000495400 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
PTPN18-216ENST00000495400 HECW1Q76N89 1606 aa24.36■■□□□ 1.49
PTPN18-216ENST00000495400 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
PTPN18-216ENST00000495400 PTPRMP28827 1452 aa24.36■■□□□ 1.49
PTPN18-216ENST00000495400 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
PTPN18-216ENST00000495400 ILDR1Q86SU0 546 aaPredicted RBP24.34■■□□□ 1.49
PTPN18-216ENST00000495400 PLCH2O75038 1416 aa24.31■■□□□ 1.48
PTPN18-216ENST00000495400 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
PTPN18-216ENST00000495400 MADDQ8WXG6 1647 aa24.3■■□□□ 1.48
PTPN18-216ENST00000495400 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
PTPN18-216ENST00000495400 ZFYVE16Q7Z3T8 1539 aa24.26■■□□□ 1.47
PTPN18-216ENST00000495400 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
PTPN18-216ENST00000495400 SCAPERQ9BY12 1400 aa24.26■■□□□ 1.47
PTPN18-216ENST00000495400 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
PTPN18-216ENST00000495400 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms