RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
SMIM11A-207ENST00000495363 SHROOM2Q13796 1616 aa20.68■□□□□ 0.9
SMIM11A-207ENST00000495363 KIAA0586Q9BVV6 1533 aa20.65■□□□□ 0.9
SMIM11A-207ENST00000495363 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
SMIM11A-207ENST00000495363 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
SMIM11A-207ENST00000495363 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
SMIM11A-207ENST00000495363 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
SMIM11A-207ENST00000495363 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
SMIM11A-207ENST00000495363 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
SMIM11A-207ENST00000495363 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
SMIM11A-207ENST00000495363 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
SMIM11A-207ENST00000495363 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
SMIM11A-207ENST00000495363 EEA1Q15075 1411 aa20.44■□□□□ 0.86
SMIM11A-207ENST00000495363 PTPRGP23470 1445 aa20.43■□□□□ 0.86
SMIM11A-207ENST00000495363 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
SMIM11A-207ENST00000495363 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMIM11A-207ENST00000495363 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
SMIM11A-207ENST00000495363 DISP1Q96F81 1524 aa20.38■□□□□ 0.85
SMIM11A-207ENST00000495363 UGGT2Q9NYU1 1516 aa20.38■□□□□ 0.85
SMIM11A-207ENST00000495363 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
SMIM11A-207ENST00000495363 ADCY10Q96PN6 1610 aa20.34■□□□□ 0.85
SMIM11A-207ENST00000495363 KIAA0556O60303 1618 aa20.33■□□□□ 0.84
SMIM11A-207ENST00000495363 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-207ENST00000495363 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
SMIM11A-207ENST00000495363 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
SMIM11A-207ENST00000495363 UACAQ9BZF9 1416 aa20.27■□□□□ 0.83
SMIM11A-207ENST00000495363 KIF21BO75037 1637 aa20.24■□□□□ 0.83
SMIM11A-207ENST00000495363 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
SMIM11A-207ENST00000495363 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
SMIM11A-207ENST00000495363 ABCC2Q92887 1545 aa20.22■□□□□ 0.83
SMIM11A-207ENST00000495363 MAPKBP1O60336 1514 aa20.21■□□□□ 0.83
SMIM11A-207ENST00000495363 UHRF1BP1LA0JNW5 1464 aa20.19■□□□□ 0.82
SMIM11A-207ENST00000495363 PLB1Q6P1J6 1458 aa20.18■□□□□ 0.82
SMIM11A-207ENST00000495363 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
SMIM11A-207ENST00000495363 KIF13AQ9H1H9 1805 aa20.15■□□□□ 0.82
SMIM11A-207ENST00000495363 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
SMIM11A-207ENST00000495363 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
SMIM11A-207ENST00000495363 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
SMIM11A-207ENST00000495363 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
SMIM11A-207ENST00000495363 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
SMIM11A-207ENST00000495363 ABCA8O94911 1581 aa20.1■□□□□ 0.81
SMIM11A-207ENST00000495363 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
SMIM11A-207ENST00000495363 ZCCHC11Q5TAX3 1644 aaKnown RBP20.09■□□□□ 0.81
SMIM11A-207ENST00000495363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
SMIM11A-207ENST00000495363 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
SMIM11A-207ENST00000495363 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
SMIM11A-207ENST00000495363 TSPOAP1O95153 1857 aa20.02■□□□□ 0.8
SMIM11A-207ENST00000495363 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
SMIM11A-207ENST00000495363 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
SMIM11A-207ENST00000495363 WDR7Q9Y4E6 1490 aa19.99■□□□□ 0.79
SMIM11A-207ENST00000495363 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
SMIM11A-207ENST00000495363 ATP10BO94823 1461 aa19.97■□□□□ 0.79
SMIM11A-207ENST00000495363 GLI2P10070 1586 aa19.95■□□□□ 0.78
SMIM11A-207ENST00000495363 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
SMIM11A-207ENST00000495363 ARHGAP35Q9NRY4 1499 aa19.94■□□□□ 0.78
SMIM11A-207ENST00000495363 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
SMIM11A-207ENST00000495363 FMN1Q68DA7 1419 aa19.87■□□□□ 0.77
SMIM11A-207ENST00000495363 KDM6BO15054 1643 aa19.87■□□□□ 0.77
SMIM11A-207ENST00000495363 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
SMIM11A-207ENST00000495363 CD109Q6YHK3 1445 aa19.85■□□□□ 0.77
SMIM11A-207ENST00000495363 PPRC1Q5VV67 1664 aaKnown RBP19.85■□□□□ 0.77
SMIM11A-207ENST00000495363 PLEKHD1A6NEE1 506 aa19.84■□□□□ 0.77
SMIM11A-207ENST00000495363 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
SMIM11A-207ENST00000495363 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
SMIM11A-207ENST00000495363 CLIP1P30622 1438 aa19.81■□□□□ 0.76
SMIM11A-207ENST00000495363 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
SMIM11A-207ENST00000495363 CFAP43Q8NDM7 1665 aa19.8■□□□□ 0.76
SMIM11A-207ENST00000495363 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
SMIM11A-207ENST00000495363 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
SMIM11A-207ENST00000495363 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
SMIM11A-207ENST00000495363 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
SMIM11A-207ENST00000495363 ABCA9Q8IUA7 1624 aa19.73■□□□□ 0.75
SMIM11A-207ENST00000495363 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
SMIM11A-207ENST00000495363 PCF11O94913 1555 aaKnown RBP19.7■□□□□ 0.74
SMIM11A-207ENST00000495363 CASKIN1Q8WXD9 1431 aa19.69■□□□□ 0.74
SMIM11A-207ENST00000495363 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
SMIM11A-207ENST00000495363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMIM11A-207ENST00000495363 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
SMIM11A-207ENST00000495363 TTC37Q6PGP7 1564 aa19.63■□□□□ 0.73
SMIM11A-207ENST00000495363 FYCO1Q9BQS8 1478 aa19.63■□□□□ 0.73
SMIM11A-207ENST00000495363 CCDC18Q5T9S5 1454 aa19.62■□□□□ 0.73
SMIM11A-207ENST00000495363 TROQ12816 1431 aaPredicted RBP19.61■□□□□ 0.73
SMIM11A-207ENST00000495363 NEO1Q92859 1461 aa19.6■□□□□ 0.73
SMIM11A-207ENST00000495363 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
SMIM11A-207ENST00000495363 RAPGEF3O95398 923 aa19.59■□□□□ 0.73
SMIM11A-207ENST00000495363 KIF14Q15058 1648 aa19.58■□□□□ 0.73
SMIM11A-207ENST00000495363 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
SMIM11A-207ENST00000495363 FANCAO15360 1455 aa19.58■□□□□ 0.72
SMIM11A-207ENST00000495363 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
SMIM11A-207ENST00000495363 PLCH2O75038 1416 aa19.54■□□□□ 0.72
SMIM11A-207ENST00000495363 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.72
SMIM11A-207ENST00000495363 CFAP74Q9C0B2 1584 aa19.52■□□□□ 0.71
SMIM11A-207ENST00000495363 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
SMIM11A-207ENST00000495363 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
SMIM11A-207ENST00000495363 KDM4FA0A1W2PPD8 638 aa19.5■□□□□ 0.71
SMIM11A-207ENST00000495363 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
SMIM11A-207ENST00000495363 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
SMIM11A-207ENST00000495363 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
SMIM11A-207ENST00000495363 SCAPERQ9BY12 1400 aa19.47■□□□□ 0.71
SMIM11A-207ENST00000495363 FRMPD1Q5SYB0 1578 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms