RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
FDPS-219ENST00000495308 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
FDPS-219ENST00000495308 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
FDPS-219ENST00000495308 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
FDPS-219ENST00000495308 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
FDPS-219ENST00000495308 CTTNBP2Q8WZ74 1663 aa22.71■■□□□ 1.23
FDPS-219ENST00000495308 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
FDPS-219ENST00000495308 IQGAP2Q13576 1575 aa22.67■■□□□ 1.22
FDPS-219ENST00000495308 JPH4Q96JJ6 628 aa22.64■■□□□ 1.21
FDPS-219ENST00000495308 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
FDPS-219ENST00000495308 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
FDPS-219ENST00000495308 KIF21BO75037 1637 aa22.6■■□□□ 1.21
FDPS-219ENST00000495308 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
FDPS-219ENST00000495308 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
FDPS-219ENST00000495308 KIAA0556O60303 1618 aa22.47■■□□□ 1.19
FDPS-219ENST00000495308 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
FDPS-219ENST00000495308 CARMIL2Q6F5E8 1435 aa22.46■■□□□ 1.19
FDPS-219ENST00000495308 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
FDPS-219ENST00000495308 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.18
FDPS-219ENST00000495308 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
FDPS-219ENST00000495308 ADCY10Q96PN6 1610 aa22.36■■□□□ 1.17
FDPS-219ENST00000495308 SAMD9Q5K651 1589 aa22.36■■□□□ 1.17
FDPS-219ENST00000495308 PTPRGP23470 1445 aa22.35■■□□□ 1.17
FDPS-219ENST00000495308 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.17
FDPS-219ENST00000495308 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
FDPS-219ENST00000495308 P3H3Q8IVL6 736 aa22.27■■□□□ 1.16
FDPS-219ENST00000495308 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
FDPS-219ENST00000495308 ABCC2Q92887 1545 aa22.22■■□□□ 1.15
FDPS-219ENST00000495308 UACAQ9BZF9 1416 aa22.22■■□□□ 1.15
FDPS-219ENST00000495308 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
FDPS-219ENST00000495308 UHRF1BP1LA0JNW5 1464 aa22.2■■□□□ 1.14
FDPS-219ENST00000495308 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
FDPS-219ENST00000495308 ABCA8O94911 1581 aa22.19■■□□□ 1.14
FDPS-219ENST00000495308 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
FDPS-219ENST00000495308 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
FDPS-219ENST00000495308 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.133e-6■□□□□ 8.1
FDPS-219ENST00000495308 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
FDPS-219ENST00000495308 MAPKBP1O60336 1514 aa22.13■■□□□ 1.13
FDPS-219ENST00000495308 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
FDPS-219ENST00000495308 KIF13AQ9H1H9 1805 aa22.12■■□□□ 1.13
FDPS-219ENST00000495308 KDM5BQ9UGL1 1544 aa22.11■■□□□ 1.13
FDPS-219ENST00000495308 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
FDPS-219ENST00000495308 DIP2BQ9P265 1576 aa22.04■■□□□ 1.12
FDPS-219ENST00000495308 CLIP1P30622 1438 aa22.03■■□□□ 1.12
FDPS-219ENST00000495308 ASXL2Q76L83 1435 aa22.03■■□□□ 1.12
FDPS-219ENST00000495308 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
FDPS-219ENST00000495308 NUP153P49790 1475 aaKnown RBP22■■□□□ 1.11
FDPS-219ENST00000495308 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
FDPS-219ENST00000495308 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
FDPS-219ENST00000495308 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
FDPS-219ENST00000495308 ATP10BO94823 1461 aa21.97■■□□□ 1.11
FDPS-219ENST00000495308 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
FDPS-219ENST00000495308 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.1
FDPS-219ENST00000495308 LRRIQ1Q96JM4 1722 aa21.94■■□□□ 1.1
FDPS-219ENST00000495308 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
FDPS-219ENST00000495308 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
FDPS-219ENST00000495308 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
FDPS-219ENST00000495308 EPRSP07814 1512 aaKnown RBP21.9■■□□□ 1.1
FDPS-219ENST00000495308 CDK13Q14004 1512 aaKnown RBP21.9■■□□□ 1.1
FDPS-219ENST00000495308 GLI2P10070 1586 aa21.89■■□□□ 1.09
FDPS-219ENST00000495308 ATP1B4Q9UN42 357 aaPredicted RBP21.88■■□□□ 1.09
FDPS-219ENST00000495308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
FDPS-219ENST00000495308 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
FDPS-219ENST00000495308 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
FDPS-219ENST00000495308 CASKIN1Q8WXD9 1431 aa21.84■■□□□ 1.09
FDPS-219ENST00000495308 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
FDPS-219ENST00000495308 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
FDPS-219ENST00000495308 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
FDPS-219ENST00000495308 CFAP43Q8NDM7 1665 aa21.81■■□□□ 1.08
FDPS-219ENST00000495308 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.07
FDPS-219ENST00000495308 CCDC18Q5T9S5 1454 aa21.75■■□□□ 1.07
FDPS-219ENST00000495308 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
FDPS-219ENST00000495308 TTC37Q6PGP7 1564 aa21.7■■□□□ 1.06
FDPS-219ENST00000495308 CD109Q6YHK3 1445 aa21.7■■□□□ 1.06
FDPS-219ENST00000495308 KIF14Q15058 1648 aa21.69■■□□□ 1.06
FDPS-219ENST00000495308 MAGI3Q5TCQ9 1506 aa21.69■■□□□ 1.06
FDPS-219ENST00000495308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.066e-8■■■■□ 20.3
FDPS-219ENST00000495308 VPS8Q8N3P4 1428 aa21.68■■□□□ 1.06
FDPS-219ENST00000495308 KDM6BO15054 1643 aa21.66■■□□□ 1.06
FDPS-219ENST00000495308 TEX14Q8IWB6 1497 aa21.66■■□□□ 1.06
FDPS-219ENST00000495308 TROQ12816 1431 aaPredicted RBP21.65■■□□□ 1.06
FDPS-219ENST00000495308 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
FDPS-219ENST00000495308 MYO5CQ9NQX4 1742 aa21.62■■□□□ 1.05
FDPS-219ENST00000495308 TIAM1Q13009 1591 aa21.57■■□□□ 1.04
FDPS-219ENST00000495308 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
FDPS-219ENST00000495308 COL17A1Q9UMD9 1497 aaPredicted RBP21.54■■□□□ 1.04
FDPS-219ENST00000495308 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
FDPS-219ENST00000495308 EHBP1L1Q8N3D4 1523 aa21.54■■□□□ 1.04
FDPS-219ENST00000495308 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
FDPS-219ENST00000495308 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
FDPS-219ENST00000495308 PREX2Q70Z35 1606 aa21.51■■□□□ 1.03
FDPS-219ENST00000495308 NEO1Q92859 1461 aa21.51■■□□□ 1.03
FDPS-219ENST00000495308 FANCAO15360 1455 aa21.5■■□□□ 1.03
FDPS-219ENST00000495308 PLCH2O75038 1416 aa21.49■■□□□ 1.03
FDPS-219ENST00000495308 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
FDPS-219ENST00000495308 ARAP3Q8WWN8 1544 aa21.47■■□□□ 1.03
FDPS-219ENST00000495308 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
FDPS-219ENST00000495308 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
FDPS-219ENST00000495308 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
FDPS-219ENST00000495308 LRRC9Q6ZRR7 1453 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms