RNA–Protein interactions for RNA: ENST00000495302.5

CBWD1-217, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-217ENST00000495302 PBRM1Q86U86 1689 aa8.1□□□□□ -1.11
CBWD1-217ENST00000495302 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.12
CBWD1-217ENST00000495302 EIF4G3O43432 1585 aaKnown RBP8.07□□□□□ -1.12
CBWD1-217ENST00000495302 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
CBWD1-217ENST00000495302 NCBP3Q53F19 620 aaKnown RBP8.06□□□□□ -1.12
CBWD1-217ENST00000495302 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
CBWD1-217ENST00000495302 ARHGAP35Q9NRY4 1499 aa8.06□□□□□ -1.12
CBWD1-217ENST00000495302 CTTNBP2Q8WZ74 1663 aa8.05□□□□□ -1.12
CBWD1-217ENST00000495302 VPS8Q8N3P4 1428 aa8.05□□□□□ -1.12
CBWD1-217ENST00000495302 ADAMTS12P58397 1594 aa8.04□□□□□ -1.12
CBWD1-217ENST00000495302 FHAD1B1AJZ9 1412 aa8.04□□□□□ -1.12
CBWD1-217ENST00000495302 TRIM26Q12899 539 aaPredicted RBP8.04□□□□□ -1.12
CBWD1-217ENST00000495302 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
CBWD1-217ENST00000495302 P3H3Q8IVL6 736 aa8.01□□□□□ -1.13
CBWD1-217ENST00000495302 FHOD3Q2V2M9 1422 aa7.98□□□□□ -1.13
CBWD1-217ENST00000495302 MAGI1Q96QZ7 1491 aaPredicted RBP7.98□□□□□ -1.13
CBWD1-217ENST00000495302 GRIN2AQ12879 1464 aa7.97□□□□□ -1.13
CBWD1-217ENST00000495302 SYNJ2O15056 1496 aa7.96□□□□□ -1.14
CBWD1-217ENST00000495302 SAMD9Q5K651 1589 aa7.96□□□□□ -1.14
CBWD1-217ENST00000495302 FBLN2P98095 1184 aa7.96□□□□□ -1.14
CBWD1-217ENST00000495302 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.14
CBWD1-217ENST00000495302 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.14
CBWD1-217ENST00000495302 IQGAP2Q13576 1575 aa7.95□□□□□ -1.14
CBWD1-217ENST00000495302 KANK4Q5T7N3 995 aaPredicted RBP7.95□□□□□ -1.14
CBWD1-217ENST00000495302 CEP170Q5SW79 1584 aa7.94□□□□□ -1.14
CBWD1-217ENST00000495302 PCF11O94913 1555 aaKnown RBP7.93□□□□□ -1.14
CBWD1-217ENST00000495302 KIAA0586Q9BVV6 1533 aa7.93□□□□□ -1.14
CBWD1-217ENST00000495302 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
CBWD1-217ENST00000495302 CHD1O14646 1710 aa7.91□□□□□ -1.14
CBWD1-217ENST00000495302 NUP160Q12769 1436 aa7.91□□□□□ -1.14
CBWD1-217ENST00000495302 DISP1Q96F81 1524 aa7.9□□□□□ -1.14
CBWD1-217ENST00000495302 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.14
CBWD1-217ENST00000495302 LRRIQ1Q96JM4 1722 aa7.9□□□□□ -1.14
CBWD1-217ENST00000495302 CASKIN1Q8WXD9 1431 aa7.9□□□□□ -1.14
CBWD1-217ENST00000495302 TIAM1Q13009 1591 aa7.9□□□□□ -1.15
CBWD1-217ENST00000495302 FMN1Q68DA7 1419 aa7.89□□□□□ -1.15
CBWD1-217ENST00000495302 FYCO1Q9BQS8 1478 aa7.89□□□□□ -1.15
CBWD1-217ENST00000495302 KIAA0556O60303 1618 aa7.88□□□□□ -1.15
CBWD1-217ENST00000495302 MAP3K1Q13233 1512 aa7.88□□□□□ -1.15
CBWD1-217ENST00000495302 JPH4Q96JJ6 628 aa7.88□□□□□ -1.15
CBWD1-217ENST00000495302 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
CBWD1-217ENST00000495302 CFAP43Q8NDM7 1665 aa7.87□□□□□ -1.15
CBWD1-217ENST00000495302 PLPPR3Q6T4P5 718 aa7.87□□□□□ -1.15
CBWD1-217ENST00000495302 LRRC9Q6ZRR7 1453 aa7.86□□□□□ -1.15
CBWD1-217ENST00000495302 ARID3CA6NKF2 412 aa7.83□□□□□ -1.16
CBWD1-217ENST00000495302 HRCP23327 699 aa7.83□□□□□ -1.16
CBWD1-217ENST00000495302 ARXQ96QS3 562 aa7.83□□□□□ -1.16
CBWD1-217ENST00000495302 HNRNPUL2Q1KMD3 747 aaKnown RBP7.82□□□□□ -1.16
CBWD1-217ENST00000495302 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
CBWD1-217ENST00000495302 CDK13Q14004 1512 aaKnown RBP7.82□□□□□ -1.16
CBWD1-217ENST00000495302 MAGI3Q5TCQ9 1506 aa7.82□□□□□ -1.16
CBWD1-217ENST00000495302 PRG4Q92954 1404 aaPredicted RBP7.81□□□□□ -1.16
CBWD1-217ENST00000495302 HECW1Q76N89 1606 aa7.81□□□□□ -1.16
CBWD1-217ENST00000495302 EPRSP07814 1512 aaKnown RBP7.81□□□□□ -1.16
CBWD1-217ENST00000495302 CARMIL2Q6F5E8 1435 aa7.81□□□□□ -1.16
CBWD1-217ENST00000495302 RRBP1Q9P2E9 1410 aaKnown RBP7.81□□□□□ -1.16
CBWD1-217ENST00000495302 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
CBWD1-217ENST00000495302 SHROOM2Q13796 1616 aa7.8□□□□□ -1.16
CBWD1-217ENST00000495302 RAPGEF6Q8TEU7 1601 aa7.8□□□□□ -1.16
CBWD1-217ENST00000495302 ERCC6L2Q5T890 1561 aa7.8□□□□□ -1.16
CBWD1-217ENST00000495302 NUP153P49790 1475 aaKnown RBP7.8□□□□□ -1.16
CBWD1-217ENST00000495302 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
CBWD1-217ENST00000495302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.79□□□□□ -1.16
CBWD1-217ENST00000495302 MTUS2Q5JR59 1369 aa7.79□□□□□ -1.16
CBWD1-217ENST00000495302 CCDC18Q5T9S5 1454 aa7.79□□□□□ -1.16
CBWD1-217ENST00000495302 CCNB3Q8WWL7 1395 aa7.78□□□□□ -1.16
CBWD1-217ENST00000495302 ABCA8O94911 1581 aa7.77□□□□□ -1.17
CBWD1-217ENST00000495302 NCOA2Q15596 1464 aa7.76□□□□□ -1.17
CBWD1-217ENST00000495302 EHBP1L1Q8N3D4 1523 aa7.76□□□□□ -1.17
CBWD1-217ENST00000495302 PTPRGP23470 1445 aa7.76□□□□□ -1.17
CBWD1-217ENST00000495302 SUPT6HQ7KZ85 1726 aaKnown RBP7.76□□□□□ -1.17
CBWD1-217ENST00000495302 ITGAEP38570 1179 aa7.75□□□□□ -1.17
CBWD1-217ENST00000495302 ARHGEF11O15085 1522 aa7.75□□□□□ -1.17
CBWD1-217ENST00000495302 FAM50AQ14320 339 aaKnown RBP7.74□□□□□ -1.17
CBWD1-217ENST00000495302 ATP10BO94823 1461 aa7.73□□□□□ -1.17
CBWD1-217ENST00000495302 FGD6Q6ZV73 1430 aa7.73□□□□□ -1.17
CBWD1-217ENST00000495302 AMER1Q5JTC6 1135 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-217ENST00000495302 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-217ENST00000495302 MYOM3Q5VTT5 1437 aa7.72□□□□□ -1.17
CBWD1-217ENST00000495302 EIF5BO60841 1220 aaKnown RBP7.71□□□□□ -1.17
CBWD1-217ENST00000495302 UACAQ9BZF9 1416 aa7.71□□□□□ -1.17
CBWD1-217ENST00000495302 OSCARQ8IYS5 282 aa7.71□□□□□ -1.18
CBWD1-217ENST00000495302 KIF14Q15058 1648 aa7.71□□□□□ -1.18
CBWD1-217ENST00000495302 TROQ12816 1431 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-217ENST00000495302 PTPN23Q9H3S7 1636 aa7.7□□□□□ -1.18
CBWD1-217ENST00000495302 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-217ENST00000495302 PTPRKQ15262 1439 aa7.7□□□□□ -1.18
CBWD1-217ENST00000495302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.7□□□□□ -1.18
CBWD1-217ENST00000495302 ABCC2Q92887 1545 aa7.68□□□□□ -1.18
CBWD1-217ENST00000495302 ADCY10Q96PN6 1610 aa7.68□□□□□ -1.18
CBWD1-217ENST00000495302 PLEKHD1A6NEE1 506 aa7.68□□□□□ -1.18
CBWD1-217ENST00000495302 ZNF644Q9H582 1327 aaPredicted RBP7.68□□□□□ -1.18
CBWD1-217ENST00000495302 TCOF1Q13428 1488 aaKnown RBP7.67□□□□□ -1.18
CBWD1-217ENST00000495302 ZEB1P37275 1124 aaPredicted RBP7.67□□□□□ -1.18
CBWD1-217ENST00000495302 GPATCH8Q9UKJ3 1502 aaKnown RBP7.66□□□□□ -1.18
CBWD1-217ENST00000495302 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
CBWD1-217ENST00000495302 RAB3GAP2Q9H2M9 1393 aa7.66□□□□□ -1.18
CBWD1-217ENST00000495302 ABCC10Q5T3U5 1492 aa7.66□□□□□ -1.18
CBWD1-217ENST00000495302 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
CBWD1-217ENST00000495302 ZCCHC11Q5TAX3 1644 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms