RNA–Protein interactions for RNA: ENST00000495042.1

GMNC-204, Transcript of geminin coiled-coil domain containing, human

TSL 1 (best)

Gene GMNC, Length 3,317 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMNC-204	ENST00000495042	CHMP4A	Q9BY43	222 aa		7.18	□□□□□ -1.26
GMNC-204	ENST00000495042	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.17	□□□□□ -1.26
GMNC-204	ENST00000495042	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.16	□□□□□ -1.26
GMNC-204	ENST00000495042	POLA2	Q14181	598 aa		7.15	□□□□□ -1.26
GMNC-204	ENST00000495042	DSG3	P32926	999 aa		7.15	□□□□□ -1.27
GMNC-204	ENST00000495042	DCAF8L2	P0C7V8	631 aa		7.14	□□□□□ -1.27
GMNC-204	ENST00000495042	CACNB1	Q02641	598 aa	Predicted RBP	7.14	□□□□□ -1.27
GMNC-204	ENST00000495042	FBLN2	P98095	1184 aa		7.13	□□□□□ -1.27
GMNC-204	ENST00000495042	ABCB7	O75027	752 aa		7.12	□□□□□ -1.27
GMNC-204	ENST00000495042	MKRN4P	Q13434	485 aa	Predicted RBP	7.12	□□□□□ -1.27
GMNC-204	ENST00000495042	ERICH6B	Q5W0A0	696 aa		7.12	□□□□□ -1.27
GMNC-204	ENST00000495042	ABCC9	O60706	1549 aa		7.12	□□□□□ -1.27
GMNC-204	ENST00000495042	CCER1	Q8TC90	406 aa	Predicted RBP	7.09	□□□□□ -1.28
GMNC-204	ENST00000495042	TSHZ2	Q9NRE2	1034 aa		7.09	□□□□□ -1.28
GMNC-204	ENST00000495042	PDE4C	Q08493	712 aa		7.07	□□□□□ -1.28
GMNC-204	ENST00000495042	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.07	□□□□□ -1.28
GMNC-204	ENST00000495042	IGSF3	O75054	1194 aa		7.06	□□□□□ -1.28
GMNC-204	ENST00000495042	DHX37	Q8IY37	1157 aa	Known RBP	7.06	□□□□□ -1.28
GMNC-204	ENST00000495042	RB1CC1	Q8TDY2	1594 aa		7.05	□□□□□ -1.28
GMNC-204	ENST00000495042	FKBP8	Q14318	412 aa		7.04	□□□□□ -1.28
GMNC-204	ENST00000495042	CDK11B	P21127	795 aa	Known RBP	7.04	□□□□□ -1.28
GMNC-204	ENST00000495042	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.04	□□□□□ -1.28
GMNC-204	ENST00000495042	BRD2	P25440	801 aa	Known RBP	7.03	□□□□□ -1.28
GMNC-204	ENST00000495042	FANCI	Q9NVI1	1328 aa		7.03	□□□□□ -1.28
GMNC-204	ENST00000495042	TAF7L	Q5H9L4	462 aa		7	□□□□□ -1.29
GMNC-204	ENST00000495042	ZBTB12	Q9Y330	459 aa	Predicted RBP	7	□□□□□ -1.29
GMNC-204	ENST00000495042	EEA1	Q15075	1411 aa		6.96	□□□□□ -1.3
GMNC-204	ENST00000495042	MIER1	Q8N108	512 aa		6.96	□□□□□ -1.3
GMNC-204	ENST00000495042	SPDYE4	A6NLX3	237 aa		6.94	□□□□□ -1.3
GMNC-204	ENST00000495042	NEFL	P07196	543 aa		6.94	□□□□□ -1.3
GMNC-204	ENST00000495042	HSP90B1	P14625	803 aa	Known RBP	6.94	□□□□□ -1.3
GMNC-204	ENST00000495042	PKNOX2	Q96KN3	472 aa		6.93	□□□□□ -1.3
GMNC-204	ENST00000495042	PROM2	Q8N271	834 aa		6.92	□□□□□ -1.3
GMNC-204	ENST00000495042	BCL11B	Q9C0K0	894 aa	Predicted RBP	6.91	□□□□□ -1.3
GMNC-204	ENST00000495042	OSCAR	Q8IYS5	282 aa		6.91	□□□□□ -1.3
GMNC-204	ENST00000495042	RSF1	Q96T23	1441 aa	Predicted RBP	6.91	□□□□□ -1.3
GMNC-204	ENST00000495042	TNIK	Q9UKE5	1360 aa		6.91	□□□□□ -1.3
GMNC-204	ENST00000495042	RBM19	Q9Y4C8	960 aa	Known RBP	6.9	□□□□□ -1.3
GMNC-204	ENST00000495042	CCDC9	Q9Y3X0	531 aa	Known RBP	6.89	□□□□□ -1.31
GMNC-204	ENST00000495042	EIF4G1	Q04637	1599 aa	Known RBP	6.89	□□□□□ -1.31
GMNC-204	ENST00000495042	PUS7	Q96PZ0	661 aa	Known RBP	6.89	□□□□□ -1.31
GMNC-204	ENST00000495042	HMGB1	P09429	215 aa	Known RBP	6.88	□□□□□ -1.31
GMNC-204	ENST00000495042	FGD1	P98174	961 aa		6.88	□□□□□ -1.31
GMNC-204	ENST00000495042	YTHDC1	Q96MU7	727 aa	Known RBP	6.87	□□□□□ -1.31
GMNC-204	ENST00000495042	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.86	□□□□□ -1.31
GMNC-204	ENST00000495042	SPDYE2B	A6NHP3	402 aa		6.85	□□□□□ -1.31
GMNC-204	ENST00000495042	SPDYE6	P0CI01	402 aa		6.85	□□□□□ -1.31
GMNC-204	ENST00000495042	SPDYE2	Q495Y8	402 aa		6.85	□□□□□ -1.31
GMNC-204	ENST00000495042	SSUH2	Q9Y2M2	353 aa		6.85	□□□□□ -1.31
GMNC-204	ENST00000495042	CUX2	O14529	1486 aa		6.85	□□□□□ -1.31
GMNC-204	ENST00000495042	CEP162	Q5TB80	1403 aa		6.84	□□□□□ -1.31
GMNC-204	ENST00000495042	CFAP44	Q96MT7	982 aa		6.83	□□□□□ -1.32
GMNC-204	ENST00000495042	ZNF692	Q9BU19	519 aa	Predicted RBP	6.83	□□□□□ -1.32
GMNC-204	ENST00000495042	NECTIN2	Q92692	538 aa		6.83	□□□□□ -1.32
GMNC-204	ENST00000495042	CCER2	I3L3R5	266 aa		6.82	□□□□□ -1.32
GMNC-204	ENST00000495042	DEK	P35659	375 aa	Known RBP	6.81	□□□□□ -1.32
GMNC-204	ENST00000495042	RSPH4A	Q5TD94	716 aa		6.81	□□□□□ -1.32
GMNC-204	ENST00000495042	C11orf95	C9JLR9	678 aa	Predicted RBP	6.8	□□□□□ -1.32
GMNC-204	ENST00000495042	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.8	□□□□□ -1.32
GMNC-204	ENST00000495042	NBR1	Q14596	966 aa		6.79	□□□□□ -1.32
GMNC-204	ENST00000495042	KIF21B	O75037	1637 aa		6.79	□□□□□ -1.32
GMNC-204	ENST00000495042	USP35	Q9P2H5	1018 aa		6.79	□□□□□ -1.32
GMNC-204	ENST00000495042	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.78	□□□□□ -1.32
GMNC-204	ENST00000495042	GOLGA3	Q08378	1498 aa		6.78	□□□□□ -1.32
GMNC-204	ENST00000495042	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	6.78	□□□□□ -1.32
GMNC-204	ENST00000495042	PABPN1	Q86U42	306 aa	Known RBP eCLIP	6.75	□□□□□ -1.33
GMNC-204	ENST00000495042	CEP164	Q9UPV0	1460 aa		6.75	□□□□□ -1.33
GMNC-204	ENST00000495042	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	6.75	□□□□□ -1.33
GMNC-204	ENST00000495042	ANO8	Q9HCE9	1232 aa	Predicted RBP	6.74	□□□□□ -1.33
GMNC-204	ENST00000495042	DHX57	Q6P158	1386 aa	Known RBP	6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	GLIPR1L2	Q4G1C9	344 aa		6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	C1orf115	Q9H7X2	142 aa		6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	VPS8	Q8N3P4	1428 aa		6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	ZBTB7C	A1YPR0	619 aa		6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	RBM42	Q9BTD8	480 aa	Known RBP	6.73	□□□□□ -1.33
GMNC-204	ENST00000495042	DNAJC5	Q9H3Z4	198 aa		6.72	□□□□□ -1.33
GMNC-204	ENST00000495042	WASHC2A	Q641Q2	1341 aa		6.72	□□□□□ -1.33
GMNC-204	ENST00000495042	POLR3GL	Q9BT43	218 aa		6.71	□□□□□ -1.33
GMNC-204	ENST00000495042	NOP58	Q9Y2X3	529 aa	Known RBP	6.71	□□□□□ -1.33
GMNC-204	ENST00000495042	SMARCA2	P51531	1590 aa		6.71	□□□□□ -1.34
GMNC-204	ENST00000495042	AKT1S1	Q96B36	256 aa		6.71	□□□□□ -1.34
GMNC-204	ENST00000495042	RSPH6A	Q9H0K4	717 aa		6.71	□□□□□ -1.34
GMNC-204	ENST00000495042	WASHC2C	Q9Y4E1	1318 aa		6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	ARID3A	Q99856	593 aa		6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	IRX6	P78412	446 aa	Predicted RBP	6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	NPM1	P06748	294 aa	Known RBP eCLIP	6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	RTL5	Q5HYW3	569 aa	Predicted RBP	6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	CCDC136	Q96JN2	1154 aa		6.7	□□□□□ -1.34
GMNC-204	ENST00000495042	RRBP1	Q9P2E9	1410 aa	Known RBP	6.69	□□□□□ -1.34
GMNC-204	ENST00000495042	BRPF1	P55201	1214 aa	Predicted RBP	6.69	□□□□□ -1.34
GMNC-204	ENST00000495042	PPP4R2	Q9NY27	417 aa		6.69	□□□□□ -1.34
GMNC-204	ENST00000495042	VASP	P50552	380 aa	Predicted RBP	6.68	□□□□□ -1.34
GMNC-204	ENST00000495042	BBX	Q8WY36	941 aa	Predicted RBP	6.68	□□□□□ -1.34
GMNC-204	ENST00000495042	BRPF3	Q9ULD4	1205 aa		6.68	□□□□□ -1.34
GMNC-204	ENST00000495042	NACAD	O15069	1562 aa		6.67	□□□□□ -1.34
GMNC-204	ENST00000495042	AAMP	Q13685	434 aa		6.67	□□□□□ -1.34
GMNC-204	ENST00000495042	ZNF428	Q96B54	188 aa		6.67	□□□□□ -1.34
GMNC-204	ENST00000495042	RGS22	Q8NE09	1264 aa		6.67	□□□□□ -1.34
GMNC-204	ENST00000495042	NCAPD3	P42695	1498 aa		6.66	□□□□□ -1.34
GMNC-204	ENST00000495042	PKD2	Q13563	968 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms