RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 KIF27Q86VH2 1401 aa38.72■■■■□ 3.79
HDDC3-203ENST00000494993 IGF1RP08069 1367 aa38.69■■■■□ 3.78
HDDC3-203ENST00000494993 KIF13AQ9H1H9 1805 aa38.61■■■■□ 3.77
HDDC3-203ENST00000494993 KIAA0586Q9BVV6 1533 aa38.59■■■■□ 3.77
HDDC3-203ENST00000494993 ADCY10Q96PN6 1610 aa38.46■■■■□ 3.75
HDDC3-203ENST00000494993 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
HDDC3-203ENST00000494993 MAPKBP1O60336 1514 aa38.39■■■■□ 3.74
HDDC3-203ENST00000494993 NPM1P06748 294 aaKnown RBP eCLIP38.37■■■■□ 3.73
HDDC3-203ENST00000494993 ABCC10Q5T3U5 1492 aa38.33■■■■□ 3.73
HDDC3-203ENST00000494993 DIP2BQ9P265 1576 aa38.29■■■■□ 3.72
HDDC3-203ENST00000494993 IQGAP2Q13576 1575 aa38.27■■■■□ 3.72
HDDC3-203ENST00000494993 FAM69CQ0P6D2 419 aa38.24■■■■□ 3.71
HDDC3-203ENST00000494993 AEBP2Q6ZN18 517 aaPredicted RBP38.21■■■■□ 3.71
HDDC3-203ENST00000494993 PTPRGP23470 1445 aa38.21■■■■□ 3.71
HDDC3-203ENST00000494993 CARMIL2Q6F5E8 1435 aa38.21■■■■□ 3.71
HDDC3-203ENST00000494993 TNIKQ9UKE5 1360 aa38.16■■■■□ 3.7
HDDC3-203ENST00000494993 RAPGEF2Q9Y4G8 1499 aa38.12■■■■□ 3.69
HDDC3-203ENST00000494993 TTBK1Q5TCY1 1321 aaPredicted RBP38.09■■■■□ 3.69
HDDC3-203ENST00000494993 TSPOAP1O95153 1857 aa38.08■■■■□ 3.69
HDDC3-203ENST00000494993 DISP1Q96F81 1524 aa38.06■■■■□ 3.68
HDDC3-203ENST00000494993 ABCC2Q92887 1545 aa38.05■■■■□ 3.68
HDDC3-203ENST00000494993 UGGT2Q9NYU1 1516 aa38.01■■■■□ 3.67
HDDC3-203ENST00000494993 UHRF1BP1LA0JNW5 1464 aa37.98■■■■□ 3.67
HDDC3-203ENST00000494993 KDM6BO15054 1643 aa37.95■■■■□ 3.67
HDDC3-203ENST00000494993 CTTNBP2Q8WZ74 1663 aa37.94■■■■□ 3.66
HDDC3-203ENST00000494993 UACAQ9BZF9 1416 aa37.94■■■■□ 3.66
HDDC3-203ENST00000494993 KIAA0556O60303 1618 aa37.94■■■■□ 3.66
HDDC3-203ENST00000494993 ASXL2Q76L83 1435 aa37.9■■■■□ 3.66
HDDC3-203ENST00000494993 PLB1Q6P1J6 1458 aa37.89■■■■□ 3.66
HDDC3-203ENST00000494993 GLI2P10070 1586 aa37.85■■■■□ 3.65
HDDC3-203ENST00000494993 KDM5BQ9UGL1 1544 aa37.82■■■■□ 3.64
HDDC3-203ENST00000494993 PPRC1Q5VV67 1664 aaKnown RBP37.81■■■■□ 3.64
HDDC3-203ENST00000494993 ZCCHC11Q5TAX3 1644 aaKnown RBP37.79■■■■□ 3.64
HDDC3-203ENST00000494993 PRXQ9BXM0 1461 aa37.72■■■■□ 3.63
HDDC3-203ENST00000494993 EPRSP07814 1512 aaKnown RBP37.69■■■■□ 3.62
HDDC3-203ENST00000494993 GOLGA3Q08378 1498 aa37.69■■■■□ 3.62
HDDC3-203ENST00000494993 MAP3K4Q9Y6R4 1608 aa37.67■■■■□ 3.62
HDDC3-203ENST00000494993 ABCA8O94911 1581 aa37.58■■■■□ 3.61
HDDC3-203ENST00000494993 WDR7Q9Y4E6 1490 aa37.54■■■■□ 3.6
HDDC3-203ENST00000494993 TEX14Q8IWB6 1497 aa37.51■■■■□ 3.59
HDDC3-203ENST00000494993 KDM4FA0A1W2PPD8 638 aa37.48■■■■□ 3.59
HDDC3-203ENST00000494993 COL17A1Q9UMD9 1497 aaPredicted RBP37.45■■■■□ 3.59
HDDC3-203ENST00000494993 CFAP43Q8NDM7 1665 aa37.41■■■■□ 3.58
HDDC3-203ENST00000494993 CSRNP3Q8WYN3 585 aa37.38■■■■□ 3.57
HDDC3-203ENST00000494993 SAMD9Q5K651 1589 aa37.34■■■■□ 3.57
HDDC3-203ENST00000494993 MAGI3Q5TCQ9 1506 aa37.3■■■■□ 3.56
HDDC3-203ENST00000494993 CD109Q6YHK3 1445 aa37.29■■■■□ 3.56
HDDC3-203ENST00000494993 P3H3Q8IVL6 736 aa37.28■■■■□ 3.56
HDDC3-203ENST00000494993 KCNH8Q96L42 1107 aa37.28■■■■□ 3.56
HDDC3-203ENST00000494993 EEA1Q15075 1411 aa37.27■■■■□ 3.56
HDDC3-203ENST00000494993 FAM9AQ8IZU1 332 aaPredicted RBP37.27■■■■□ 3.56
HDDC3-203ENST00000494993 ADGRL1O94910 1474 aa37.24■■■■□ 3.55
HDDC3-203ENST00000494993 ATP10BO94823 1461 aa37.21■■■■□ 3.55
HDDC3-203ENST00000494993 RAPGEF6Q8TEU7 1601 aa37.19■■■■□ 3.54
HDDC3-203ENST00000494993 ARID3CA6NKF2 412 aa37.16■■■■□ 3.54
HDDC3-203ENST00000494993 ABCA9Q8IUA7 1624 aa37.1■■■■□ 3.53
HDDC3-203ENST00000494993 KIF21BO75037 1637 aa37.04■■■■□ 3.52
HDDC3-203ENST00000494993 ARAP3Q8WWN8 1544 aa37.01■■■■□ 3.52
HDDC3-203ENST00000494993 FHOD3Q2V2M9 1422 aa37.01■■■■□ 3.51
HDDC3-203ENST00000494993 RANGAP1P46060 587 aaPredicted RBP37■■■■□ 3.51
HDDC3-203ENST00000494993 NUP153P49790 1475 aaKnown RBP37■■■■□ 3.51
HDDC3-203ENST00000494993 EFCAB5A4FU69 1503 aa36.94■■■■□ 3.5
HDDC3-203ENST00000494993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.93■■■■□ 3.5
HDDC3-203ENST00000494993 HNRNPUL2Q1KMD3 747 aaKnown RBP36.93■■■■□ 3.5
HDDC3-203ENST00000494993 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
HDDC3-203ENST00000494993 NEO1Q92859 1461 aa36.86■■■■□ 3.49
HDDC3-203ENST00000494993 HECW2Q9P2P5 1572 aa36.76■■■■□ 3.48
HDDC3-203ENST00000494993 FRMPD1Q5SYB0 1578 aa36.75■■■■□ 3.47
HDDC3-203ENST00000494993 PLEKHD1A6NEE1 506 aa36.75■■■■□ 3.47
HDDC3-203ENST00000494993 RAPGEF3O95398 923 aa36.73■■■■□ 3.47
HDDC3-203ENST00000494993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.69■■■■□ 3.46
HDDC3-203ENST00000494993 CFAP74Q9C0B2 1584 aa36.67■■■■□ 3.46
HDDC3-203ENST00000494993 CHIC1Q5VXU3 224 aa36.67■■■■□ 3.46
HDDC3-203ENST00000494993 TTC37Q6PGP7 1564 aa36.66■■■■□ 3.46
HDDC3-203ENST00000494993 CDK13Q14004 1512 aaKnown RBP36.65■■■■□ 3.46
HDDC3-203ENST00000494993 RICTORQ6R327 1708 aa36.65■■■■□ 3.46
HDDC3-203ENST00000494993 UBTFP17480 764 aaKnown RBP36.64■■■■□ 3.46
HDDC3-203ENST00000494993 EHMT2Q96KQ7 1210 aa36.63■■■■□ 3.45
HDDC3-203ENST00000494993 ADAMTSL3P82987 1691 aa36.63■■■■□ 3.45
HDDC3-203ENST00000494993 FANCAO15360 1455 aa36.6■■■■□ 3.45
HDDC3-203ENST00000494993 AKNAQ7Z591 1439 aa36.59■■■■□ 3.45
HDDC3-203ENST00000494993 DENND4BO75064 1496 aaPredicted RBP36.58■■■■□ 3.45
HDDC3-203ENST00000494993 HECW1Q76N89 1606 aa36.58■■■■□ 3.45
HDDC3-203ENST00000494993 ARHGAP35Q9NRY4 1499 aa36.57■■■■□ 3.45
HDDC3-203ENST00000494993 FMN1Q68DA7 1419 aa36.57■■■■□ 3.44
HDDC3-203ENST00000494993 BCORL1Q5H9F3 1711 aa36.56■■■■□ 3.44
HDDC3-203ENST00000494993 ARHGEF40Q8TER5 1519 aa36.55■■■■□ 3.44
HDDC3-203ENST00000494993 PTPRMP28827 1452 aa36.49■■■■□ 3.43
HDDC3-203ENST00000494993 ZMYM4Q5VZL5 1548 aa36.47■■■■□ 3.43
HDDC3-203ENST00000494993 MADDQ8WXG6 1647 aa36.45■■■■□ 3.43
HDDC3-203ENST00000494993 MYO5CQ9NQX4 1742 aa36.45■■■■□ 3.43
HDDC3-203ENST00000494993 ATP1B4Q9UN42 357 aaPredicted RBP36.44■■■■□ 3.42
HDDC3-203ENST00000494993 ARID4BQ4LE39 1312 aaPredicted RBP36.43■■■■□ 3.42
HDDC3-203ENST00000494993 LRRIQ1Q96JM4 1722 aa36.42■■■■□ 3.42
HDDC3-203ENST00000494993 PLCH2O75038 1416 aa36.42■■■■□ 3.42
HDDC3-203ENST00000494993 ZFYVE16Q7Z3T8 1539 aa36.38■■■■□ 3.41
HDDC3-203ENST00000494993 KIF14Q15058 1648 aa36.37■■■■□ 3.41
HDDC3-203ENST00000494993 CDK11AQ9UQ88 783 aaPredicted RBP36.35■■■■□ 3.41
HDDC3-203ENST00000494993 RIMS1Q86UR5 1692 aaKnown RBP36.35■■■■□ 3.41
HDDC3-203ENST00000494993 MAGI2Q86UL8 1455 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms