RNA–Protein interactions for RNA: ENST00000494975.1

PRUNE2-215, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-215ENST00000494975 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
PRUNE2-215ENST00000494975 CYB5RLQ6IPT4 315 aa12.83□□□□□ -0.36
PRUNE2-215ENST00000494975 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
PRUNE2-215ENST00000494975 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
PRUNE2-215ENST00000494975 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
PRUNE2-215ENST00000494975 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
PRUNE2-215ENST00000494975 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
PRUNE2-215ENST00000494975 NUP160Q12769 1436 aa12.79□□□□□ -0.36
PRUNE2-215ENST00000494975 CUL7Q14999 1698 aa12.75□□□□□ -0.37
PRUNE2-215ENST00000494975 IGF1RP08069 1367 aa12.74□□□□□ -0.37
PRUNE2-215ENST00000494975 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.38
PRUNE2-215ENST00000494975 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
PRUNE2-215ENST00000494975 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
PRUNE2-215ENST00000494975 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
PRUNE2-215ENST00000494975 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
PRUNE2-215ENST00000494975 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
PRUNE2-215ENST00000494975 JPH4Q96JJ6 628 aa12.66□□□□□ -0.38
PRUNE2-215ENST00000494975 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
PRUNE2-215ENST00000494975 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
PRUNE2-215ENST00000494975 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
PRUNE2-215ENST00000494975 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
PRUNE2-215ENST00000494975 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
PRUNE2-215ENST00000494975 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
PRUNE2-215ENST00000494975 PTPRGP23470 1445 aa12.51□□□□□ -0.41
PRUNE2-215ENST00000494975 PRXQ9BXM0 1461 aa12.51□□□□□ -0.41
PRUNE2-215ENST00000494975 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
PRUNE2-215ENST00000494975 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
PRUNE2-215ENST00000494975 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
PRUNE2-215ENST00000494975 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
PRUNE2-215ENST00000494975 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRUNE2-215ENST00000494975 UGGT2Q9NYU1 1516 aa12.48□□□□□ -0.41
PRUNE2-215ENST00000494975 EEA1Q15075 1411 aa12.48□□□□□ -0.41
PRUNE2-215ENST00000494975 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
PRUNE2-215ENST00000494975 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
PRUNE2-215ENST00000494975 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
PRUNE2-215ENST00000494975 KIAA0556O60303 1618 aa12.45□□□□□ -0.42
PRUNE2-215ENST00000494975 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
PRUNE2-215ENST00000494975 MAPKBP1O60336 1514 aa12.42□□□□□ -0.42
PRUNE2-215ENST00000494975 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
PRUNE2-215ENST00000494975 UACAQ9BZF9 1416 aa12.41□□□□□ -0.42
PRUNE2-215ENST00000494975 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
PRUNE2-215ENST00000494975 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
PRUNE2-215ENST00000494975 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
PRUNE2-215ENST00000494975 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
PRUNE2-215ENST00000494975 ABCC10Q5T3U5 1492 aa12.38□□□□□ -0.43
PRUNE2-215ENST00000494975 RANGAP1P46060 587 aaPredicted RBP12.37□□□□□ -0.43
PRUNE2-215ENST00000494975 DIP2BQ9P265 1576 aa12.37□□□□□ -0.43
PRUNE2-215ENST00000494975 KIF21BO75037 1637 aa12.37□□□□□ -0.43
PRUNE2-215ENST00000494975 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
PRUNE2-215ENST00000494975 PLB1Q6P1J6 1458 aa12.35□□□□□ -0.43
PRUNE2-215ENST00000494975 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
PRUNE2-215ENST00000494975 ASXL2Q76L83 1435 aa12.35□□□□□ -0.43
PRUNE2-215ENST00000494975 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
PRUNE2-215ENST00000494975 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.44
PRUNE2-215ENST00000494975 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
PRUNE2-215ENST00000494975 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
PRUNE2-215ENST00000494975 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
PRUNE2-215ENST00000494975 ABCA8O94911 1581 aa12.3□□□□□ -0.44
PRUNE2-215ENST00000494975 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
PRUNE2-215ENST00000494975 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
PRUNE2-215ENST00000494975 ARID3CA6NKF2 412 aa12.29□□□□□ -0.44
PRUNE2-215ENST00000494975 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
PRUNE2-215ENST00000494975 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.45
PRUNE2-215ENST00000494975 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
PRUNE2-215ENST00000494975 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
PRUNE2-215ENST00000494975 GLI2P10070 1586 aa12.25□□□□□ -0.45
PRUNE2-215ENST00000494975 KCNA4P22459 653 aa12.24□□□□□ -0.45
PRUNE2-215ENST00000494975 RAPGEF6Q8TEU7 1601 aa12.24□□□□□ -0.45
PRUNE2-215ENST00000494975 KDM6BO15054 1643 aa12.22□□□□□ -0.45
PRUNE2-215ENST00000494975 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
PRUNE2-215ENST00000494975 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
PRUNE2-215ENST00000494975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
PRUNE2-215ENST00000494975 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
PRUNE2-215ENST00000494975 ATP10BO94823 1461 aa12.21□□□□□ -0.46
PRUNE2-215ENST00000494975 MAP3K4Q9Y6R4 1608 aa12.2□□□□□ -0.46
PRUNE2-215ENST00000494975 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
PRUNE2-215ENST00000494975 TEX14Q8IWB6 1497 aa12.19□□□□□ -0.46
PRUNE2-215ENST00000494975 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
PRUNE2-215ENST00000494975 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
PRUNE2-215ENST00000494975 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
PRUNE2-215ENST00000494975 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
PRUNE2-215ENST00000494975 FMN1Q68DA7 1419 aa12.15□□□□□ -0.46
PRUNE2-215ENST00000494975 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
PRUNE2-215ENST00000494975 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
PRUNE2-215ENST00000494975 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
PRUNE2-215ENST00000494975 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
PRUNE2-215ENST00000494975 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
PRUNE2-215ENST00000494975 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
PRUNE2-215ENST00000494975 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
PRUNE2-215ENST00000494975 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
PRUNE2-215ENST00000494975 CLIP1P30622 1438 aa12.08□□□□□ -0.48
PRUNE2-215ENST00000494975 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
PRUNE2-215ENST00000494975 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
PRUNE2-215ENST00000494975 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
PRUNE2-215ENST00000494975 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
PRUNE2-215ENST00000494975 NEO1Q92859 1461 aa12.02□□□□□ -0.48
PRUNE2-215ENST00000494975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.02□□□□□ -0.48
PRUNE2-215ENST00000494975 PHLDB1Q86UU1 1377 aa12.02□□□□□ -0.49
PRUNE2-215ENST00000494975 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
PRUNE2-215ENST00000494975 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms