RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 KIAA0586Q9BVV6 1533 aa18.37■□□□□ 0.53
KDM1A-205ENST00000494920 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
KDM1A-205ENST00000494920 IQGAP2Q13576 1575 aa18.31■□□□□ 0.52
KDM1A-205ENST00000494920 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
KDM1A-205ENST00000494920 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
KDM1A-205ENST00000494920 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
KDM1A-205ENST00000494920 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
KDM1A-205ENST00000494920 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
KDM1A-205ENST00000494920 ERCC6L2Q5T890 1561 aa18.27■□□□□ 0.52
KDM1A-205ENST00000494920 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
KDM1A-205ENST00000494920 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
KDM1A-205ENST00000494920 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
KDM1A-205ENST00000494920 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
KDM1A-205ENST00000494920 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
KDM1A-205ENST00000494920 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
KDM1A-205ENST00000494920 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
KDM1A-205ENST00000494920 CARMIL2Q6F5E8 1435 aa18.09■□□□□ 0.49
KDM1A-205ENST00000494920 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
KDM1A-205ENST00000494920 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.48
KDM1A-205ENST00000494920 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
KDM1A-205ENST00000494920 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
KDM1A-205ENST00000494920 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
KDM1A-205ENST00000494920 PTPRGP23470 1445 aa17.99■□□□□ 0.47
KDM1A-205ENST00000494920 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
KDM1A-205ENST00000494920 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
KDM1A-205ENST00000494920 ADCY10Q96PN6 1610 aa17.98■□□□□ 0.47
KDM1A-205ENST00000494920 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
KDM1A-205ENST00000494920 ABCA8O94911 1581 aa17.96■□□□□ 0.47
KDM1A-205ENST00000494920 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
KDM1A-205ENST00000494920 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
KDM1A-205ENST00000494920 CLIP1P30622 1438 aa17.93■□□□□ 0.46
KDM1A-205ENST00000494920 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
KDM1A-205ENST00000494920 PLB1Q6P1J6 1458 aa17.92■□□□□ 0.46
KDM1A-205ENST00000494920 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
KDM1A-205ENST00000494920 P3H3Q8IVL6 736 aa17.9■□□□□ 0.46
KDM1A-205ENST00000494920 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
KDM1A-205ENST00000494920 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
KDM1A-205ENST00000494920 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
KDM1A-205ENST00000494920 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
KDM1A-205ENST00000494920 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
KDM1A-205ENST00000494920 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
KDM1A-205ENST00000494920 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
KDM1A-205ENST00000494920 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
KDM1A-205ENST00000494920 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
KDM1A-205ENST00000494920 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
KDM1A-205ENST00000494920 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
KDM1A-205ENST00000494920 ATP10BO94823 1461 aa17.77■□□□□ 0.44
KDM1A-205ENST00000494920 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
KDM1A-205ENST00000494920 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
KDM1A-205ENST00000494920 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
KDM1A-205ENST00000494920 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
KDM1A-205ENST00000494920 CDK13Q14004 1512 aaKnown RBP17.71■□□□□ 0.43
KDM1A-205ENST00000494920 ASXL2Q76L83 1435 aa17.7■□□□□ 0.42
KDM1A-205ENST00000494920 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
KDM1A-205ENST00000494920 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
KDM1A-205ENST00000494920 ABCC10Q5T3U5 1492 aa17.67■□□□□ 0.42
KDM1A-205ENST00000494920 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
KDM1A-205ENST00000494920 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
KDM1A-205ENST00000494920 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
KDM1A-205ENST00000494920 GLI2P10070 1586 aa17.63■□□□□ 0.41
KDM1A-205ENST00000494920 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
KDM1A-205ENST00000494920 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
KDM1A-205ENST00000494920 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
KDM1A-205ENST00000494920 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
KDM1A-205ENST00000494920 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
KDM1A-205ENST00000494920 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
KDM1A-205ENST00000494920 TROQ12816 1431 aaPredicted RBP17.56■□□□□ 0.4
KDM1A-205ENST00000494920 ABCA9Q8IUA7 1624 aa17.56■□□□□ 0.4
KDM1A-205ENST00000494920 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
KDM1A-205ENST00000494920 KIF14Q15058 1648 aa17.54■□□□□ 0.4
KDM1A-205ENST00000494920 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
KDM1A-205ENST00000494920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.39
KDM1A-205ENST00000494920 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
KDM1A-205ENST00000494920 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
KDM1A-205ENST00000494920 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
KDM1A-205ENST00000494920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
KDM1A-205ENST00000494920 FAM69CQ0P6D2 419 aa17.5■□□□□ 0.39
KDM1A-205ENST00000494920 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
KDM1A-205ENST00000494920 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
KDM1A-205ENST00000494920 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
KDM1A-205ENST00000494920 TSPOAP1O95153 1857 aa17.46■□□□□ 0.38
KDM1A-205ENST00000494920 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
KDM1A-205ENST00000494920 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
KDM1A-205ENST00000494920 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
KDM1A-205ENST00000494920 CD109Q6YHK3 1445 aa17.43■□□□□ 0.38
KDM1A-205ENST00000494920 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
KDM1A-205ENST00000494920 CDC42BPAQ5VT25 1732 aa17.42■□□□□ 0.38
KDM1A-205ENST00000494920 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
KDM1A-205ENST00000494920 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
KDM1A-205ENST00000494920 PREX2Q70Z35 1606 aa17.4■□□□□ 0.38
KDM1A-205ENST00000494920 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
KDM1A-205ENST00000494920 CDC42BPBQ9Y5S2 1711 aa17.4■□□□□ 0.38
KDM1A-205ENST00000494920 PLCH2O75038 1416 aa17.38■□□□□ 0.37
KDM1A-205ENST00000494920 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
KDM1A-205ENST00000494920 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
KDM1A-205ENST00000494920 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
KDM1A-205ENST00000494920 NEO1Q92859 1461 aa17.35■□□□□ 0.37
KDM1A-205ENST00000494920 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
KDM1A-205ENST00000494920 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
KDM1A-205ENST00000494920 FANCAO15360 1455 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms