RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 EEA1Q15075 1411 aa24.91■■□□□ 1.58
SHISA5-216ENST00000494854 SHROOM2Q13796 1616 aa24.91■■□□□ 1.58
SHISA5-216ENST00000494854 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
SHISA5-216ENST00000494854 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
SHISA5-216ENST00000494854 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
SHISA5-216ENST00000494854 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
SHISA5-216ENST00000494854 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
SHISA5-216ENST00000494854 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
SHISA5-216ENST00000494854 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
SHISA5-216ENST00000494854 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
SHISA5-216ENST00000494854 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
SHISA5-216ENST00000494854 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.53
SHISA5-216ENST00000494854 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
SHISA5-216ENST00000494854 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
SHISA5-216ENST00000494854 KIF21BO75037 1637 aa24.62■■□□□ 1.53
SHISA5-216ENST00000494854 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
SHISA5-216ENST00000494854 IQGAP2Q13576 1575 aa24.58■■□□□ 1.53
SHISA5-216ENST00000494854 CEP162Q5TB80 1403 aa24.56■■□□□ 1.52
SHISA5-216ENST00000494854 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
SHISA5-216ENST00000494854 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
SHISA5-216ENST00000494854 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
SHISA5-216ENST00000494854 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
SHISA5-216ENST00000494854 PTPRGP23470 1445 aa24.45■■□□□ 1.5
SHISA5-216ENST00000494854 HRCP23327 699 aa24.44■■□□□ 1.5
SHISA5-216ENST00000494854 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
SHISA5-216ENST00000494854 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
SHISA5-216ENST00000494854 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
SHISA5-216ENST00000494854 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.5
SHISA5-216ENST00000494854 KIAA0556O60303 1618 aa24.34■■□□□ 1.49
SHISA5-216ENST00000494854 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
SHISA5-216ENST00000494854 UHRF1BP1LA0JNW5 1464 aa24.3■■□□□ 1.48
SHISA5-216ENST00000494854 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
SHISA5-216ENST00000494854 UACAQ9BZF9 1416 aa24.29■■□□□ 1.48
SHISA5-216ENST00000494854 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
SHISA5-216ENST00000494854 ABCC2Q92887 1545 aa24.27■■□□□ 1.48
SHISA5-216ENST00000494854 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
SHISA5-216ENST00000494854 CLIP1P30622 1438 aa24.26■■□□□ 1.47
SHISA5-216ENST00000494854 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
SHISA5-216ENST00000494854 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
SHISA5-216ENST00000494854 DIP2BQ9P265 1576 aa24.18■■□□□ 1.46
SHISA5-216ENST00000494854 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
SHISA5-216ENST00000494854 PLB1Q6P1J6 1458 aa24.14■■□□□ 1.45
SHISA5-216ENST00000494854 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
SHISA5-216ENST00000494854 ASXL2Q76L83 1435 aa24.12■■□□□ 1.45
SHISA5-216ENST00000494854 ABCA8O94911 1581 aa24.11■■□□□ 1.45
SHISA5-216ENST00000494854 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
SHISA5-216ENST00000494854 ZCCHC11Q5TAX3 1644 aaKnown RBP24.08■■□□□ 1.45
SHISA5-216ENST00000494854 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
SHISA5-216ENST00000494854 GLI2P10070 1586 aa24.05■■□□□ 1.44
SHISA5-216ENST00000494854 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
SHISA5-216ENST00000494854 EPRSP07814 1512 aaKnown RBP23.99■■□□□ 1.43
SHISA5-216ENST00000494854 EFCAB5A4FU69 1503 aa23.98■■□□□ 1.43
SHISA5-216ENST00000494854 WDR7Q9Y4E6 1490 aa23.97■■□□□ 1.43
SHISA5-216ENST00000494854 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
SHISA5-216ENST00000494854 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
SHISA5-216ENST00000494854 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
SHISA5-216ENST00000494854 ATP10BO94823 1461 aa23.91■■□□□ 1.42
SHISA5-216ENST00000494854 MAP3K4Q9Y6R4 1608 aa23.9■■□□□ 1.42
SHISA5-216ENST00000494854 PPRC1Q5VV67 1664 aaKnown RBP23.89■■□□□ 1.41
SHISA5-216ENST00000494854 ARHGAP35Q9NRY4 1499 aa23.88■■□□□ 1.41
SHISA5-216ENST00000494854 APLP2Q06481 763 aa23.88■■□□□ 1.41
SHISA5-216ENST00000494854 ZEB1P37275 1124 aaPredicted RBP23.87■■□□□ 1.41
SHISA5-216ENST00000494854 KDM6BO15054 1643 aa23.84■■□□□ 1.41
SHISA5-216ENST00000494854 NUP153P49790 1475 aaKnown RBP23.84■■□□□ 1.41
SHISA5-216ENST00000494854 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
SHISA5-216ENST00000494854 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
SHISA5-216ENST00000494854 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
SHISA5-216ENST00000494854 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
SHISA5-216ENST00000494854 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
SHISA5-216ENST00000494854 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
SHISA5-216ENST00000494854 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
SHISA5-216ENST00000494854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
SHISA5-216ENST00000494854 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
SHISA5-216ENST00000494854 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
SHISA5-216ENST00000494854 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
SHISA5-216ENST00000494854 COL17A1Q9UMD9 1497 aaPredicted RBP23.69■■□□□ 1.38
SHISA5-216ENST00000494854 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
SHISA5-216ENST00000494854 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
SHISA5-216ENST00000494854 CDK13Q14004 1512 aaKnown RBP23.61■■□□□ 1.37
SHISA5-216ENST00000494854 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
SHISA5-216ENST00000494854 CCER1Q8TC90 406 aaPredicted RBP23.61■■□□□ 1.37
SHISA5-216ENST00000494854 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
SHISA5-216ENST00000494854 MAP3K1Q13233 1512 aa23.58■■□□□ 1.37
SHISA5-216ENST00000494854 ARAP3Q8WWN8 1544 aa23.58■■□□□ 1.37
SHISA5-216ENST00000494854 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
SHISA5-216ENST00000494854 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
SHISA5-216ENST00000494854 NEO1Q92859 1461 aa23.55■■□□□ 1.36
SHISA5-216ENST00000494854 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
SHISA5-216ENST00000494854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.54■■□□□ 1.365e-7■■□□□ 12.4
SHISA5-216ENST00000494854 PCF11O94913 1555 aaKnown RBP23.54■■□□□ 1.36
SHISA5-216ENST00000494854 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
SHISA5-216ENST00000494854 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
SHISA5-216ENST00000494854 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
SHISA5-216ENST00000494854 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
SHISA5-216ENST00000494854 FYCO1Q9BQS8 1478 aa23.47■■□□□ 1.35
SHISA5-216ENST00000494854 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
SHISA5-216ENST00000494854 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
SHISA5-216ENST00000494854 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
SHISA5-216ENST00000494854 FANCAO15360 1455 aa23.43■■□□□ 1.34
SHISA5-216ENST00000494854 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms