RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 BCANQ96GW7 911 aa6.66□□□□□ -1.34
PRKD3-210ENST00000494667 ABCA5Q8WWZ7 1642 aa6.65□□□□□ -1.34
PRKD3-210ENST00000494667 POLR1AO95602 1720 aaPredicted RBP6.65□□□□□ -1.34
PRKD3-210ENST00000494667 NCOA2Q15596 1464 aa6.64□□□□□ -1.35
PRKD3-210ENST00000494667 HNRNPUL2Q1KMD3 747 aaKnown RBP6.64□□□□□ -1.35
PRKD3-210ENST00000494667 BIVM-ERCC5R4GMW8 1640 aa6.64□□□□□ -1.35
PRKD3-210ENST00000494667 RNF123Q5XPI4 1314 aa6.63□□□□□ -1.35
PRKD3-210ENST00000494667 IPO9Q96P70 1041 aaKnown RBP6.62□□□□□ -1.35
PRKD3-210ENST00000494667 DCAF8L2P0C7V8 631 aa6.62□□□□□ -1.35
PRKD3-210ENST00000494667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKD3-210ENST00000494667 CCNB3Q8WWL7 1395 aa6.62□□□□□ -1.35
PRKD3-210ENST00000494667 PRXQ9BXM0 1461 aa6.62□□□□□ -1.35
PRKD3-210ENST00000494667 CFAP43Q8NDM7 1665 aa6.61□□□□□ -1.35
PRKD3-210ENST00000494667 CCDC136Q96JN2 1154 aa6.61□□□□□ -1.35
PRKD3-210ENST00000494667 KDM5BQ9UGL1 1544 aa6.61□□□□□ -1.35
PRKD3-210ENST00000494667 FHAD1B1AJZ9 1412 aa6.6□□□□□ -1.35
PRKD3-210ENST00000494667 TOP2BQ02880 1626 aa6.6□□□□□ -1.35
PRKD3-210ENST00000494667 RAPGEF2Q9Y4G8 1499 aa6.6□□□□□ -1.35
PRKD3-210ENST00000494667 ITGAEP38570 1179 aa6.6□□□□□ -1.35
PRKD3-210ENST00000494667 DAXXQ9UER7 740 aaPredicted RBP6.6□□□□□ -1.35
PRKD3-210ENST00000494667 EIF5BO60841 1220 aaKnown RBP6.6□□□□□ -1.35
PRKD3-210ENST00000494667 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
PRKD3-210ENST00000494667 SETD5Q9C0A6 1442 aa6.59□□□□□ -1.35
PRKD3-210ENST00000494667 PAK3O75914 559 aaPredicted RBP6.59□□□□□ -1.35
PRKD3-210ENST00000494667 PKNOX2Q96KN3 472 aa6.59□□□□□ -1.35
PRKD3-210ENST00000494667 ANP32CO43423 234 aa6.59□□□□□ -1.36
PRKD3-210ENST00000494667 IL27Q8NEV9 243 aa6.59□□□□□ -1.36
PRKD3-210ENST00000494667 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.36
PRKD3-210ENST00000494667 TIAM1Q13009 1591 aa6.58□□□□□ -1.36
PRKD3-210ENST00000494667 RTL5Q5HYW3 569 aaPredicted RBP6.58□□□□□ -1.36
PRKD3-210ENST00000494667 SMG6Q86US8 1419 aaKnown RBP6.57□□□□□ -1.36
PRKD3-210ENST00000494667 ZBED9Q6R2W3 1325 aa6.56□□□□□ -1.36
PRKD3-210ENST00000494667 UBTFP17480 764 aaKnown RBP6.56□□□□□ -1.36
PRKD3-210ENST00000494667 EHMT2Q96KQ7 1210 aa6.56□□□□□ -1.36
PRKD3-210ENST00000494667 FAM43AQ8N2R8 423 aa6.55□□□□□ -1.36
PRKD3-210ENST00000494667 SLC24A1O60721 1099 aa6.55□□□□□ -1.36
PRKD3-210ENST00000494667 ANP32AP39687 249 aaKnown RBP6.55□□□□□ -1.36
PRKD3-210ENST00000494667 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
PRKD3-210ENST00000494667 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
PRKD3-210ENST00000494667 ZBTB47Q9UFB7 747 aaPredicted RBP6.53□□□□□ -1.36
PRKD3-210ENST00000494667 CNTLNQ9NXG0 1405 aa6.52□□□□□ -1.37
PRKD3-210ENST00000494667 TRIM52Q96A61 297 aa6.52□□□□□ -1.37
PRKD3-210ENST00000494667 GLIPR1L2Q4G1C9 344 aa6.51□□□□□ -1.37
PRKD3-210ENST00000494667 ARHGAP35Q9NRY4 1499 aa6.51□□□□□ -1.37
PRKD3-210ENST00000494667 MS4A1P11836 297 aa6.51□□□□□ -1.37
PRKD3-210ENST00000494667 NBR1Q14596 966 aa6.5□□□□□ -1.37
PRKD3-210ENST00000494667 HECW1Q76N89 1606 aa6.5□□□□□ -1.37
PRKD3-210ENST00000494667 LRRC9Q6ZRR7 1453 aa6.5□□□□□ -1.37
PRKD3-210ENST00000494667 GSE1Q14687 1217 aa6.49□□□□□ -1.37
PRKD3-210ENST00000494667 VIRMAQ69YN4 1812 aaKnown RBP6.49□□□□□ -1.37
PRKD3-210ENST00000494667 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
PRKD3-210ENST00000494667 KANK4Q5T7N3 995 aaPredicted RBP6.48□□□□□ -1.37
PRKD3-210ENST00000494667 ZMYM4Q5VZL5 1548 aa6.48□□□□□ -1.37
PRKD3-210ENST00000494667 TCERG1O14776 1098 aaKnown RBP6.48□□□□□ -1.37
PRKD3-210ENST00000494667 UACAQ9BZF9 1416 aa6.48□□□□□ -1.37
PRKD3-210ENST00000494667 GCC2Q8IWJ2 1684 aa6.48□□□□□ -1.37
PRKD3-210ENST00000494667 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
PRKD3-210ENST00000494667 UNC13AQ9UPW8 1703 aa6.47□□□□□ -1.37
PRKD3-210ENST00000494667 AQRO60306 1485 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRKD3-210ENST00000494667 PTPN23Q9H3S7 1636 aa6.47□□□□□ -1.37
PRKD3-210ENST00000494667 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRKD3-210ENST00000494667 CENPJQ9HC77 1338 aaPredicted RBP6.47□□□□□ -1.37
PRKD3-210ENST00000494667 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
PRKD3-210ENST00000494667 HFM1A2PYH4 1435 aa6.46□□□□□ -1.38
PRKD3-210ENST00000494667 RRP9O43818 475 aaKnown RBP6.46□□□□□ -1.38
PRKD3-210ENST00000494667 DDRGK1Q96HY6 314 aa6.45□□□□□ -1.38
PRKD3-210ENST00000494667 INSRP06213 1382 aa6.45□□□□□ -1.38
PRKD3-210ENST00000494667 AKNAQ7Z591 1439 aa6.45□□□□□ -1.38
PRKD3-210ENST00000494667 B4GALNT3Q6L9W6 998 aa6.45□□□□□ -1.38
PRKD3-210ENST00000494667 NEFMP07197 916 aa6.44□□□□□ -1.38
PRKD3-210ENST00000494667 BACH2Q9BYV9 841 aa6.44□□□□□ -1.38
PRKD3-210ENST00000494667 BRPF3Q9ULD4 1205 aa6.43□□□□□ -1.38
PRKD3-210ENST00000494667 NUDCQ9Y266 331 aa6.43□□□□□ -1.38
PRKD3-210ENST00000494667 CCDC144AA2RUR9 1427 aa6.43□□□□□ -1.38
PRKD3-210ENST00000494667 SPATA31E1Q6ZUB1 1445 aa6.42□□□□□ -1.38
PRKD3-210ENST00000494667 FYCO1Q9BQS8 1478 aa6.42□□□□□ -1.38
PRKD3-210ENST00000494667 PHLDB1Q86UU1 1377 aa6.42□□□□□ -1.38
PRKD3-210ENST00000494667 ZMYND15Q9H091 742 aa6.42□□□□□ -1.38
PRKD3-210ENST00000494667 PRDM2Q13029 1718 aa6.42□□□□□ -1.38
PRKD3-210ENST00000494667 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
PRKD3-210ENST00000494667 EFCAB5A4FU69 1503 aa6.41□□□□□ -1.38
PRKD3-210ENST00000494667 RTN4Q9NQC3 1192 aaKnown RBP6.41□□□□□ -1.38
PRKD3-210ENST00000494667 E9PCH4 1651 aa6.41□□□□□ -1.38
PRKD3-210ENST00000494667 THOC2Q8NI27 1593 aaKnown RBP6.41□□□□□ -1.38
PRKD3-210ENST00000494667 TONSLQ96HA7 1378 aa6.41□□□□□ -1.38
PRKD3-210ENST00000494667 MYOM3Q5VTT5 1437 aa6.41□□□□□ -1.38
PRKD3-210ENST00000494667 IRX6P78412 446 aaPredicted RBP6.41□□□□□ -1.38
PRKD3-210ENST00000494667 PCF11O94913 1555 aaKnown RBP6.41□□□□□ -1.38
PRKD3-210ENST00000494667 CCDC7Q96M83 1385 aa6.4□□□□□ -1.38
PRKD3-210ENST00000494667 LRPPRCP42704 1394 aaKnown RBP6.4□□□□□ -1.39
PRKD3-210ENST00000494667 CUX1P39880 1505 aa6.4□□□□□ -1.39
PRKD3-210ENST00000494667 PODXL2Q9NZ53 605 aa6.4□□□□□ -1.39
PRKD3-210ENST00000494667 MIA2Q96PC5 1412 aa6.4□□□□□ -1.39
PRKD3-210ENST00000494667 PDE4AP27815 886 aa6.39□□□□□ -1.39
PRKD3-210ENST00000494667 NFKBIBQ15653 356 aa6.39□□□□□ -1.39
PRKD3-210ENST00000494667 SIN3AQ96ST3 1273 aa6.39□□□□□ -1.39
PRKD3-210ENST00000494667 KTN1Q86UP2 1357 aaKnown RBP6.39□□□□□ -1.39
PRKD3-210ENST00000494667 DENND4BO75064 1496 aaPredicted RBP6.39□□□□□ -1.39
PRKD3-210ENST00000494667 FRAT1Q92837 279 aaPredicted RBP6.39□□□□□ -1.39
PRKD3-210ENST00000494667 CTTNBP2Q8WZ74 1663 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms