RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
CNNM3-205ENST00000494595 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
CNNM3-205ENST00000494595 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
CNNM3-205ENST00000494595 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
CNNM3-205ENST00000494595 IQGAP2Q13576 1575 aa23.02■■□□□ 1.28
CNNM3-205ENST00000494595 SHROOM2Q13796 1616 aa23■■□□□ 1.27
CNNM3-205ENST00000494595 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
CNNM3-205ENST00000494595 TNIKQ9UKE5 1360 aa22.98■■□□□ 1.27
CNNM3-205ENST00000494595 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
CNNM3-205ENST00000494595 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
CNNM3-205ENST00000494595 CTTNBP2Q8WZ74 1663 aa22.96■■□□□ 1.27
CNNM3-205ENST00000494595 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
CNNM3-205ENST00000494595 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
CNNM3-205ENST00000494595 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
CNNM3-205ENST00000494595 CARMIL2Q6F5E8 1435 aa22.86■■□□□ 1.25
CNNM3-205ENST00000494595 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
CNNM3-205ENST00000494595 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
CNNM3-205ENST00000494595 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
CNNM3-205ENST00000494595 RANGAP1P46060 587 aaPredicted RBP22.81■■□□□ 1.24
CNNM3-205ENST00000494595 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
CNNM3-205ENST00000494595 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
CNNM3-205ENST00000494595 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
CNNM3-205ENST00000494595 EFCAB5A4FU69 1503 aa22.78■■□□□ 1.24
CNNM3-205ENST00000494595 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
CNNM3-205ENST00000494595 CLIP1P30622 1438 aa22.75■■□□□ 1.23
CNNM3-205ENST00000494595 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
CNNM3-205ENST00000494595 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
CNNM3-205ENST00000494595 PTPRGP23470 1445 aa22.74■■□□□ 1.23
CNNM3-205ENST00000494595 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
CNNM3-205ENST00000494595 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
CNNM3-205ENST00000494595 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
CNNM3-205ENST00000494595 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
CNNM3-205ENST00000494595 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
CNNM3-205ENST00000494595 FMN1Q68DA7 1419 aa22.58■■□□□ 1.21
CNNM3-205ENST00000494595 UHRF1BP1LA0JNW5 1464 aa22.57■■□□□ 1.2
CNNM3-205ENST00000494595 ABCA8O94911 1581 aa22.57■■□□□ 1.2
CNNM3-205ENST00000494595 ABCC2Q92887 1545 aa22.53■■□□□ 1.2
CNNM3-205ENST00000494595 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
CNNM3-205ENST00000494595 CASKIN1Q8WXD9 1431 aa22.48■■□□□ 1.19
CNNM3-205ENST00000494595 VPS8Q8N3P4 1428 aa22.47■■□□□ 1.19
CNNM3-205ENST00000494595 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
CNNM3-205ENST00000494595 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
CNNM3-205ENST00000494595 KDM5BQ9UGL1 1544 aa22.46■■□□□ 1.19
CNNM3-205ENST00000494595 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
CNNM3-205ENST00000494595 ATP10BO94823 1461 aa22.41■■□□□ 1.18
CNNM3-205ENST00000494595 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
CNNM3-205ENST00000494595 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.17
CNNM3-205ENST00000494595 HECW1Q76N89 1606 aa22.38■■□□□ 1.17
CNNM3-205ENST00000494595 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
CNNM3-205ENST00000494595 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
CNNM3-205ENST00000494595 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
CNNM3-205ENST00000494595 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
CNNM3-205ENST00000494595 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
CNNM3-205ENST00000494595 CDK13Q14004 1512 aaKnown RBP22.31■■□□□ 1.16
CNNM3-205ENST00000494595 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
CNNM3-205ENST00000494595 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
CNNM3-205ENST00000494595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
CNNM3-205ENST00000494595 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
CNNM3-205ENST00000494595 WDR7Q9Y4E6 1490 aa22.24■■□□□ 1.15
CNNM3-205ENST00000494595 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
CNNM3-205ENST00000494595 LRRIQ1Q96JM4 1722 aa22.23■■□□□ 1.15
CNNM3-205ENST00000494595 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
CNNM3-205ENST00000494595 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
CNNM3-205ENST00000494595 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
CNNM3-205ENST00000494595 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
CNNM3-205ENST00000494595 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
CNNM3-205ENST00000494595 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
CNNM3-205ENST00000494595 APLP2Q06481 763 aa22.13■■□□□ 1.13
CNNM3-205ENST00000494595 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
CNNM3-205ENST00000494595 KCNH8Q96L42 1107 aa22.13■■□□□ 1.13
CNNM3-205ENST00000494595 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
CNNM3-205ENST00000494595 MTUS2Q5JR59 1369 aa22.12■■□□□ 1.13
CNNM3-205ENST00000494595 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
CNNM3-205ENST00000494595 DIP2BQ9P265 1576 aa22.11■■□□□ 1.13
CNNM3-205ENST00000494595 GLI2P10070 1586 aa22.1■■□□□ 1.13
CNNM3-205ENST00000494595 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
CNNM3-205ENST00000494595 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.13
CNNM3-205ENST00000494595 TRHP20396 242 aaPredicted RBP22.04■■□□□ 1.12
CNNM3-205ENST00000494595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.12
CNNM3-205ENST00000494595 KIF14Q15058 1648 aa22.02■■□□□ 1.12
CNNM3-205ENST00000494595 ABCA9Q8IUA7 1624 aa22.02■■□□□ 1.11
CNNM3-205ENST00000494595 CD109Q6YHK3 1445 aa21.99■■□□□ 1.11
CNNM3-205ENST00000494595 NCOA2Q15596 1464 aa21.98■■□□□ 1.11
CNNM3-205ENST00000494595 KIF13AQ9H1H9 1805 aa21.98■■□□□ 1.11
CNNM3-205ENST00000494595 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
CNNM3-205ENST00000494595 MAP3K4Q9Y6R4 1608 aa21.96■■□□□ 1.11
CNNM3-205ENST00000494595 PLCH2O75038 1416 aa21.95■■□□□ 1.1
CNNM3-205ENST00000494595 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
CNNM3-205ENST00000494595 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
CNNM3-205ENST00000494595 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
CNNM3-205ENST00000494595 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
CNNM3-205ENST00000494595 ARAP3Q8WWN8 1544 aa21.9■■□□□ 1.1
CNNM3-205ENST00000494595 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.1
CNNM3-205ENST00000494595 PPRC1Q5VV67 1664 aaKnown RBP21.86■■□□□ 1.09
CNNM3-205ENST00000494595 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
CNNM3-205ENST00000494595 EFCAB2Q5VUJ9 269 aa21.85■■□□□ 1.09
CNNM3-205ENST00000494595 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
CNNM3-205ENST00000494595 CFDP1Q9UEE9 299 aaPredicted RBP21.84■■□□□ 1.09
CNNM3-205ENST00000494595 FANCAO15360 1455 aa21.83■■□□□ 1.09
CNNM3-205ENST00000494595 NEO1Q92859 1461 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms