RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
ABCA1-204ENST00000494467 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
ABCA1-204ENST00000494467 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
ABCA1-204ENST00000494467 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
ABCA1-204ENST00000494467 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.02
ABCA1-204ENST00000494467 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
ABCA1-204ENST00000494467 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
ABCA1-204ENST00000494467 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
ABCA1-204ENST00000494467 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
ABCA1-204ENST00000494467 FBLN2P98095 1184 aa14.88□□□□□ -0.03
ABCA1-204ENST00000494467 CLIP1P30622 1438 aa14.87□□□□□ -0.03
ABCA1-204ENST00000494467 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
ABCA1-204ENST00000494467 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
ABCA1-204ENST00000494467 DISP1Q96F81 1524 aa14.85□□□□□ -0.03
ABCA1-204ENST00000494467 KIAA0556O60303 1618 aa14.84□□□□□ -0.03
ABCA1-204ENST00000494467 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
ABCA1-204ENST00000494467 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
ABCA1-204ENST00000494467 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
ABCA1-204ENST00000494467 CARMIL2Q6F5E8 1435 aa14.79□□□□□ -0.04
ABCA1-204ENST00000494467 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
ABCA1-204ENST00000494467 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
ABCA1-204ENST00000494467 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
ABCA1-204ENST00000494467 FHOD3Q2V2M9 1422 aa14.71□□□□□ -0.05
ABCA1-204ENST00000494467 ERCC6L2Q5T890 1561 aa14.7□□□□□ -0.06
ABCA1-204ENST00000494467 CASKIN1Q8WXD9 1431 aa14.69□□□□□ -0.06
ABCA1-204ENST00000494467 MAP3K1Q13233 1512 aa14.69□□□□□ -0.06
ABCA1-204ENST00000494467 FYCO1Q9BQS8 1478 aa14.69□□□□□ -0.06
ABCA1-204ENST00000494467 ABCA8O94911 1581 aa14.68□□□□□ -0.06
ABCA1-204ENST00000494467 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
ABCA1-204ENST00000494467 PCF11O94913 1555 aaKnown RBP14.65□□□□□ -0.06
ABCA1-204ENST00000494467 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
ABCA1-204ENST00000494467 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
ABCA1-204ENST00000494467 PTPRGP23470 1445 aa14.64□□□□□ -0.07
ABCA1-204ENST00000494467 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
ABCA1-204ENST00000494467 LRRIQ1Q96JM4 1722 aa14.63□□□□□ -0.07
ABCA1-204ENST00000494467 RANGAP1P46060 587 aaPredicted RBP14.62□□□□□ -0.07
ABCA1-204ENST00000494467 CFAP43Q8NDM7 1665 aa14.61□□□□□ -0.07
ABCA1-204ENST00000494467 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
ABCA1-204ENST00000494467 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
ABCA1-204ENST00000494467 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
ABCA1-204ENST00000494467 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
ABCA1-204ENST00000494467 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
ABCA1-204ENST00000494467 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
ABCA1-204ENST00000494467 UACAQ9BZF9 1416 aa14.58□□□□□ -0.07
ABCA1-204ENST00000494467 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.08
ABCA1-204ENST00000494467 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
ABCA1-204ENST00000494467 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
ABCA1-204ENST00000494467 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
ABCA1-204ENST00000494467 KDM5BQ9UGL1 1544 aa14.54□□□□□ -0.08
ABCA1-204ENST00000494467 ADCY10Q96PN6 1610 aa14.54□□□□□ -0.08
ABCA1-204ENST00000494467 ATP10BO94823 1461 aa14.5□□□□□ -0.09
ABCA1-204ENST00000494467 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
ABCA1-204ENST00000494467 LRRC9Q6ZRR7 1453 aa14.48□□□□□ -0.09
ABCA1-204ENST00000494467 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.09
ABCA1-204ENST00000494467 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.09
ABCA1-204ENST00000494467 MAGI3Q5TCQ9 1506 aa14.45□□□□□ -0.1
ABCA1-204ENST00000494467 APLP2Q06481 763 aa14.44□□□□□ -0.1
ABCA1-204ENST00000494467 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
ABCA1-204ENST00000494467 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
ABCA1-204ENST00000494467 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
ABCA1-204ENST00000494467 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
ABCA1-204ENST00000494467 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
ABCA1-204ENST00000494467 MTUS2Q5JR59 1369 aa14.37□□□□□ -0.11
ABCA1-204ENST00000494467 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
ABCA1-204ENST00000494467 PLEKHD1A6NEE1 506 aa14.36□□□□□ -0.11
ABCA1-204ENST00000494467 ATP1B4Q9UN42 357 aaPredicted RBP14.36□□□□□ -0.11
ABCA1-204ENST00000494467 KIF14Q15058 1648 aa14.36□□□□□ -0.11
ABCA1-204ENST00000494467 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
ABCA1-204ENST00000494467 WDR7Q9Y4E6 1490 aa14.35□□□□□ -0.11
ABCA1-204ENST00000494467 NCOA2Q15596 1464 aa14.34□□□□□ -0.11
ABCA1-204ENST00000494467 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
ABCA1-204ENST00000494467 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
ABCA1-204ENST00000494467 ABCA9Q8IUA7 1624 aa14.32□□□□□ -0.12
ABCA1-204ENST00000494467 ITSN2Q9NZM3 1697 aa14.32□□□□□ -0.12
ABCA1-204ENST00000494467 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
ABCA1-204ENST00000494467 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
ABCA1-204ENST00000494467 CDC42BPAQ5VT25 1732 aa14.31□□□□□ -0.12
ABCA1-204ENST00000494467 GLI2P10070 1586 aa14.3□□□□□ -0.12
ABCA1-204ENST00000494467 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
ABCA1-204ENST00000494467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.3□□□□□ -0.12
ABCA1-204ENST00000494467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
ABCA1-204ENST00000494467 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
ABCA1-204ENST00000494467 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
ABCA1-204ENST00000494467 MYO5CQ9NQX4 1742 aa14.28□□□□□ -0.12
ABCA1-204ENST00000494467 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
ABCA1-204ENST00000494467 PREX2Q70Z35 1606 aa14.27□□□□□ -0.12
ABCA1-204ENST00000494467 PHLDB1Q86UU1 1377 aa14.27□□□□□ -0.12
ABCA1-204ENST00000494467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
ABCA1-204ENST00000494467 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
ABCA1-204ENST00000494467 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
ABCA1-204ENST00000494467 GPATCH8Q9UKJ3 1502 aaKnown RBP14.26□□□□□ -0.13
ABCA1-204ENST00000494467 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
ABCA1-204ENST00000494467 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
ABCA1-204ENST00000494467 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
ABCA1-204ENST00000494467 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
ABCA1-204ENST00000494467 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
ABCA1-204ENST00000494467 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
ABCA1-204ENST00000494467 PLCH2O75038 1416 aa14.23□□□□□ -0.13
ABCA1-204ENST00000494467 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
ABCA1-204ENST00000494467 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms