RNA–Protein interactions for RNA: ENST00000494443.5

EMD-209, Transcript of emerin, humanhuman

TSL 2

Gene EMD, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-209ENST00000494443 KIAA0586Q9BVV6 1533 aa23.42■■□□□ 1.34
EMD-209ENST00000494443 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
EMD-209ENST00000494443 SHROOM2Q13796 1616 aa23.39■■□□□ 1.33
EMD-209ENST00000494443 PRG4Q92954 1404 aaPredicted RBP23.39■■□□□ 1.33
EMD-209ENST00000494443 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
EMD-209ENST00000494443 EEA1Q15075 1411 aa23.33■■□□□ 1.33
EMD-209ENST00000494443 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
EMD-209ENST00000494443 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
EMD-209ENST00000494443 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
EMD-209ENST00000494443 IQGAP2Q13576 1575 aa23.24■■□□□ 1.31
EMD-209ENST00000494443 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
EMD-209ENST00000494443 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
EMD-209ENST00000494443 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
EMD-209ENST00000494443 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
EMD-209ENST00000494443 PTPRGP23470 1445 aa23.12■■□□□ 1.29
EMD-209ENST00000494443 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
EMD-209ENST00000494443 CTTNBP2Q8WZ74 1663 aa23.1■■□□□ 1.29
EMD-209ENST00000494443 NPM1P06748 294 aaKnown RBP eCLIP23.09■■□□□ 1.29
EMD-209ENST00000494443 DISP1Q96F81 1524 aa23.08■■□□□ 1.28
EMD-209ENST00000494443 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
EMD-209ENST00000494443 KIF21BO75037 1637 aa23.02■■□□□ 1.28
EMD-209ENST00000494443 KIAA0556O60303 1618 aa23■■□□□ 1.27
EMD-209ENST00000494443 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
EMD-209ENST00000494443 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
EMD-209ENST00000494443 ADCY10Q96PN6 1610 aa22.95■■□□□ 1.26
EMD-209ENST00000494443 UACAQ9BZF9 1416 aa22.95■■□□□ 1.26
EMD-209ENST00000494443 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
EMD-209ENST00000494443 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
EMD-209ENST00000494443 UHRF1BP1LA0JNW5 1464 aa22.9■■□□□ 1.26
EMD-209ENST00000494443 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
EMD-209ENST00000494443 MAPKBP1O60336 1514 aa22.84■■□□□ 1.25
EMD-209ENST00000494443 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
EMD-209ENST00000494443 PLB1Q6P1J6 1458 aa22.81■■□□□ 1.24
EMD-209ENST00000494443 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
EMD-209ENST00000494443 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
EMD-209ENST00000494443 ABCC10Q5T3U5 1492 aa22.77■■□□□ 1.24
EMD-209ENST00000494443 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
EMD-209ENST00000494443 ABCA8O94911 1581 aa22.76■■□□□ 1.23
EMD-209ENST00000494443 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
EMD-209ENST00000494443 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
EMD-209ENST00000494443 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
EMD-209ENST00000494443 DIP2BQ9P265 1576 aa22.68■■□□□ 1.22
EMD-209ENST00000494443 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
EMD-209ENST00000494443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
EMD-209ENST00000494443 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
EMD-209ENST00000494443 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
EMD-209ENST00000494443 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
EMD-209ENST00000494443 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
EMD-209ENST00000494443 ATP10BO94823 1461 aa22.62■■□□□ 1.21
EMD-209ENST00000494443 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
EMD-209ENST00000494443 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
EMD-209ENST00000494443 KCNH8Q96L42 1107 aa22.6■■□□□ 1.21
EMD-209ENST00000494443 EPRSP07814 1512 aaKnown RBP22.59■■□□□ 1.21
EMD-209ENST00000494443 ATP1B4Q9UN42 357 aaPredicted RBP22.58■■□□□ 1.21
EMD-209ENST00000494443 GLI2P10070 1586 aa22.58■■□□□ 1.2
EMD-209ENST00000494443 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
EMD-209ENST00000494443 CLIP1P30622 1438 aa22.53■■□□□ 1.2
EMD-209ENST00000494443 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
EMD-209ENST00000494443 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
EMD-209ENST00000494443 CD109Q6YHK3 1445 aa22.45■■□□□ 1.18
EMD-209ENST00000494443 HECW1Q76N89 1606 aa22.45■■□□□ 1.18
EMD-209ENST00000494443 TSPOAP1O95153 1857 aa22.45■■□□□ 1.18
EMD-209ENST00000494443 CDK11AQ9UQ88 783 aaPredicted RBP22.44■■□□□ 1.18
EMD-209ENST00000494443 MAP3K4Q9Y6R4 1608 aa22.44■■□□□ 1.18
EMD-209ENST00000494443 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
EMD-209ENST00000494443 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
EMD-209ENST00000494443 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
EMD-209ENST00000494443 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
EMD-209ENST00000494443 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.17
EMD-209ENST00000494443 KDM6BO15054 1643 aa22.37■■□□□ 1.17
EMD-209ENST00000494443 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
EMD-209ENST00000494443 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
EMD-209ENST00000494443 ABCA9Q8IUA7 1624 aa22.33■■□□□ 1.17
EMD-209ENST00000494443 FYCO1Q9BQS8 1478 aa22.33■■□□□ 1.16
EMD-209ENST00000494443 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
EMD-209ENST00000494443 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
EMD-209ENST00000494443 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
EMD-209ENST00000494443 TROQ12816 1431 aaPredicted RBP22.26■■□□□ 1.15
EMD-209ENST00000494443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.25■■□□□ 1.155e-20■□□□□ 10.9
EMD-209ENST00000494443 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
EMD-209ENST00000494443 LRRIQ1Q96JM4 1722 aa22.21■■□□□ 1.15
EMD-209ENST00000494443 NEO1Q92859 1461 aa22.21■■□□□ 1.15
EMD-209ENST00000494443 KIF14Q15058 1648 aa22.19■■□□□ 1.14
EMD-209ENST00000494443 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
EMD-209ENST00000494443 ARAP3Q8WWN8 1544 aa22.17■■□□□ 1.14
EMD-209ENST00000494443 PLCH2O75038 1416 aa22.17■■□□□ 1.14
EMD-209ENST00000494443 FANCAO15360 1455 aa22.15■■□□□ 1.14
EMD-209ENST00000494443 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
EMD-209ENST00000494443 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
EMD-209ENST00000494443 AKNAQ7Z591 1439 aa22.14■■□□□ 1.13
EMD-209ENST00000494443 MTUS2Q5JR59 1369 aa22.12■■□□□ 1.13
EMD-209ENST00000494443 CFAP74Q9C0B2 1584 aa22.12■■□□□ 1.13
EMD-209ENST00000494443 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
EMD-209ENST00000494443 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
EMD-209ENST00000494443 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
EMD-209ENST00000494443 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
EMD-209ENST00000494443 ADGRL1O94910 1474 aa22.04■■□□□ 1.12
EMD-209ENST00000494443 APLP2Q06481 763 aa22.03■■□□□ 1.12
EMD-209ENST00000494443 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
EMD-209ENST00000494443 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms