RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GRIN2AQ12879 1464 aa32.77■■■□□ 2.84
KPNA1-210ENST00000494339 FBLN2P98095 1184 aa32.77■■■□□ 2.84
KPNA1-210ENST00000494339 ARHGAP35Q9NRY4 1499 aa32.62■■■□□ 2.81
KPNA1-210ENST00000494339 CHD1O14646 1710 aa32.59■■■□□ 2.81
KPNA1-210ENST00000494339 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
KPNA1-210ENST00000494339 IQGAP2Q13576 1575 aa32.58■■■□□ 2.81
KPNA1-210ENST00000494339 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
KPNA1-210ENST00000494339 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
KPNA1-210ENST00000494339 NUP160Q12769 1436 aa32.53■■■□□ 2.8
KPNA1-210ENST00000494339 P3H3Q8IVL6 736 aa32.49■■■□□ 2.79
KPNA1-210ENST00000494339 EFCAB5A4FU69 1503 aa32.49■■■□□ 2.79
KPNA1-210ENST00000494339 VPS8Q8N3P4 1428 aa32.49■■■□□ 2.79
KPNA1-210ENST00000494339 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
KPNA1-210ENST00000494339 FHOD3Q2V2M9 1422 aa32.41■■■□□ 2.78
KPNA1-210ENST00000494339 UGGT2Q9NYU1 1516 aa32.39■■■□□ 2.78
KPNA1-210ENST00000494339 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
KPNA1-210ENST00000494339 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
KPNA1-210ENST00000494339 DISP1Q96F81 1524 aa32.27■■■□□ 2.76
KPNA1-210ENST00000494339 KIAA0556O60303 1618 aa32.25■■■□□ 2.75
KPNA1-210ENST00000494339 FMN1Q68DA7 1419 aa32.21■■■□□ 2.75
KPNA1-210ENST00000494339 APLP2Q06481 763 aa32.18■■■□□ 2.74
KPNA1-210ENST00000494339 PCF11O94913 1555 aaKnown RBP32.18■■■□□ 2.74
KPNA1-210ENST00000494339 CLASP1Q7Z460 1538 aa32.17■■■□□ 2.74
KPNA1-210ENST00000494339 CARMIL2Q6F5E8 1435 aa32.15■■■□□ 2.74
KPNA1-210ENST00000494339 SHROOM2Q13796 1616 aa32.13■■■□□ 2.73
KPNA1-210ENST00000494339 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
KPNA1-210ENST00000494339 TTBK1Q5TCY1 1321 aaPredicted RBP32.12■■■□□ 2.73
KPNA1-210ENST00000494339 ATP1B4Q9UN42 357 aaPredicted RBP32.11■■■□□ 2.73
KPNA1-210ENST00000494339 CASKIN1Q8WXD9 1431 aa32.1■■■□□ 2.73
KPNA1-210ENST00000494339 FYCO1Q9BQS8 1478 aa32.09■■■□□ 2.73
KPNA1-210ENST00000494339 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
KPNA1-210ENST00000494339 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
KPNA1-210ENST00000494339 TIAM1Q13009 1591 aa31.97■■■□□ 2.71
KPNA1-210ENST00000494339 KANK4Q5T7N3 995 aaPredicted RBP31.95■■■□□ 2.71
KPNA1-210ENST00000494339 LRRIQ1Q96JM4 1722 aa31.94■■■□□ 2.7
KPNA1-210ENST00000494339 MAP3K1Q13233 1512 aa31.94■■■□□ 2.7
KPNA1-210ENST00000494339 HECW1Q76N89 1606 aa31.92■■■□□ 2.7
KPNA1-210ENST00000494339 CFAP43Q8NDM7 1665 aa31.92■■■□□ 2.7
KPNA1-210ENST00000494339 RAPGEF6Q8TEU7 1601 aa31.9■■■□□ 2.7
KPNA1-210ENST00000494339 TRIM26Q12899 539 aaPredicted RBP31.9■■■□□ 2.7
KPNA1-210ENST00000494339 PLB1Q6P1J6 1458 aa31.89■■■□□ 2.7
KPNA1-210ENST00000494339 PTPRGP23470 1445 aa31.88■■■□□ 2.69
KPNA1-210ENST00000494339 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
KPNA1-210ENST00000494339 ARID3CA6NKF2 412 aa31.84■■■□□ 2.69
KPNA1-210ENST00000494339 LRRC9Q6ZRR7 1453 aa31.82■■■□□ 2.68
KPNA1-210ENST00000494339 NUP153P49790 1475 aaKnown RBP31.82■■■□□ 2.68
KPNA1-210ENST00000494339 EPRSP07814 1512 aaKnown RBP31.81■■■□□ 2.68
KPNA1-210ENST00000494339 CCDC18Q5T9S5 1454 aa31.81■■■□□ 2.68
KPNA1-210ENST00000494339 ABCA8O94911 1581 aa31.8■■■□□ 2.68
KPNA1-210ENST00000494339 CDK13Q14004 1512 aaKnown RBP31.79■■■□□ 2.68
KPNA1-210ENST00000494339 MTUS2Q5JR59 1369 aa31.7■■■□□ 2.67
KPNA1-210ENST00000494339 UACAQ9BZF9 1416 aa31.69■■■□□ 2.66
KPNA1-210ENST00000494339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
KPNA1-210ENST00000494339 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
KPNA1-210ENST00000494339 MAGI3Q5TCQ9 1506 aa31.66■■■□□ 2.66
KPNA1-210ENST00000494339 EHBP1L1Q8N3D4 1523 aa31.62■■■□□ 2.65
KPNA1-210ENST00000494339 ABCC2Q92887 1545 aa31.6■■■□□ 2.65
KPNA1-210ENST00000494339 ATP10BO94823 1461 aa31.59■■■□□ 2.65
KPNA1-210ENST00000494339 ARHGEF11O15085 1522 aa31.57■■■□□ 2.64
KPNA1-210ENST00000494339 CDK11AQ9UQ88 783 aaPredicted RBP31.55■■■□□ 2.64
KPNA1-210ENST00000494339 SUPT6HQ7KZ85 1726 aaKnown RBP31.54■■■□□ 2.64
KPNA1-210ENST00000494339 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
KPNA1-210ENST00000494339 RIMBP3CA6NJZ7 1639 aa31.53■■■□□ 2.64
KPNA1-210ENST00000494339 RIMBP3BA6NNM3 1639 aa31.53■■■□□ 2.64
KPNA1-210ENST00000494339 RIMBP3Q9UFD9 1639 aa31.53■■■□□ 2.64
KPNA1-210ENST00000494339 UHRF1BP1LA0JNW5 1464 aa31.51■■■□□ 2.63
KPNA1-210ENST00000494339 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
KPNA1-210ENST00000494339 NCOA2Q15596 1464 aa31.5■■■□□ 2.63
KPNA1-210ENST00000494339 ADCY10Q96PN6 1610 aa31.46■■■□□ 2.63
KPNA1-210ENST00000494339 TROQ12816 1431 aaPredicted RBP31.46■■■□□ 2.63
KPNA1-210ENST00000494339 RRBP1Q9P2E9 1410 aaKnown RBP31.44■■■□□ 2.62
KPNA1-210ENST00000494339 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
KPNA1-210ENST00000494339 ZCCHC11Q5TAX3 1644 aaKnown RBP31.41■■■□□ 2.62
KPNA1-210ENST00000494339 KDM5BQ9UGL1 1544 aa31.4■■■□□ 2.62
KPNA1-210ENST00000494339 CCNB3Q8WWL7 1395 aa31.4■■■□□ 2.62
KPNA1-210ENST00000494339 KIF14Q15058 1648 aa31.36■■■□□ 2.61
KPNA1-210ENST00000494339 MYOM3Q5VTT5 1437 aa31.34■■■□□ 2.61
KPNA1-210ENST00000494339 CYB5RLQ6IPT4 315 aa31.33■■■□□ 2.61
KPNA1-210ENST00000494339 FGD6Q6ZV73 1430 aa31.31■■■□□ 2.6
KPNA1-210ENST00000494339 FAM50AQ14320 339 aaKnown RBP31.28■■■□□ 2.6
KPNA1-210ENST00000494339 ABCC10Q5T3U5 1492 aa31.2■■■□□ 2.59
KPNA1-210ENST00000494339 NPM1P06748 294 aaKnown RBP eCLIP31.2■■■□□ 2.58
KPNA1-210ENST00000494339 ITGAEP38570 1179 aa31.2■■■□□ 2.58
KPNA1-210ENST00000494339 KCNH8Q96L42 1107 aa31.2■■■□□ 2.58
KPNA1-210ENST00000494339 PTPN23Q9H3S7 1636 aa31.19■■■□□ 2.58
KPNA1-210ENST00000494339 MIA2Q96PC5 1412 aa31.17■■■□□ 2.58
KPNA1-210ENST00000494339 GPATCH8Q9UKJ3 1502 aaKnown RBP31.17■■■□□ 2.58
KPNA1-210ENST00000494339 ITSN2Q9NZM3 1697 aa31.16■■■□□ 2.58
KPNA1-210ENST00000494339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.15■■■□□ 2.58
KPNA1-210ENST00000494339 CDC42BPAQ5VT25 1732 aa31.14■■■□□ 2.58
KPNA1-210ENST00000494339 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.58
KPNA1-210ENST00000494339 ASXL2Q76L83 1435 aa31.12■■■□□ 2.57
KPNA1-210ENST00000494339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.12■■■□□ 2.57
KPNA1-210ENST00000494339 TTC37Q6PGP7 1564 aa31.11■■■□□ 2.57
KPNA1-210ENST00000494339 CFDP1Q9UEE9 299 aaPredicted RBP31.11■■■□□ 2.57
KPNA1-210ENST00000494339 TCOF1Q13428 1488 aaKnown RBP31.11■■■□□ 2.57
KPNA1-210ENST00000494339 ZNF644Q9H582 1327 aaPredicted RBP31.05■■■□□ 2.56
KPNA1-210ENST00000494339 ZNF777Q9ULD5 760 aaPredicted RBP31.03■■■□□ 2.56
KPNA1-210ENST00000494339 PREX2Q70Z35 1606 aa31.02■■■□□ 2.56
KPNA1-210ENST00000494339 CDC42BPBQ9Y5S2 1711 aa31.01■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms