RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 JPH4Q96JJ6 628 aa39.69■■■■□ 3.94
LCN2-207ENST00000494317 CUL7Q14999 1698 aa39.65■■■■□ 3.94
LCN2-207ENST00000494317 KIAA0586Q9BVV6 1533 aa39.52■■■■□ 3.92
LCN2-207ENST00000494317 CARMIL1Q5VZK9 1371 aa39.5■■■■□ 3.91
LCN2-207ENST00000494317 ADCY10Q96PN6 1610 aa39.19■■■■□ 3.86
LCN2-207ENST00000494317 IQGAP2Q13576 1575 aa39.18■■■■□ 3.86
LCN2-207ENST00000494317 RAPGEF2Q9Y4G8 1499 aa39.17■■■■□ 3.86
LCN2-207ENST00000494317 NPM1P06748 294 aaKnown RBP eCLIP39.16■■■■□ 3.86
LCN2-207ENST00000494317 CARMIL2Q6F5E8 1435 aa39.12■■■■□ 3.85
LCN2-207ENST00000494317 PTPRGP23470 1445 aa39.11■■■■□ 3.85
LCN2-207ENST00000494317 KIF13AQ9H1H9 1805 aa39.1■■■■□ 3.85
LCN2-207ENST00000494317 MAPKBP1O60336 1514 aa39.09■■■■□ 3.85
LCN2-207ENST00000494317 TNIKQ9UKE5 1360 aa39.06■■■■□ 3.84
LCN2-207ENST00000494317 TTBK1Q5TCY1 1321 aaPredicted RBP39.05■■■■□ 3.84
LCN2-207ENST00000494317 ABCC10Q5T3U5 1492 aa39.02■■■■□ 3.84
LCN2-207ENST00000494317 DISP1Q96F81 1524 aa38.99■■■■□ 3.83
LCN2-207ENST00000494317 FAM69CQ0P6D2 419 aa38.98■■■■□ 3.83
LCN2-207ENST00000494317 UGGT2Q9NYU1 1516 aa38.94■■■■□ 3.82
LCN2-207ENST00000494317 DIP2BQ9P265 1576 aa38.93■■■■□ 3.82
LCN2-207ENST00000494317 ABCC2Q92887 1545 aa38.86■■■■□ 3.81
LCN2-207ENST00000494317 PRXQ9BXM0 1461 aa38.85■■■■□ 3.81
LCN2-207ENST00000494317 KIAA0556O60303 1618 aa38.83■■■■□ 3.81
LCN2-207ENST00000494317 UACAQ9BZF9 1416 aa38.82■■■■□ 3.81
LCN2-207ENST00000494317 UHRF1BP1LA0JNW5 1464 aa38.82■■■■□ 3.81
LCN2-207ENST00000494317 CTTNBP2Q8WZ74 1663 aa38.81■■■■□ 3.8
LCN2-207ENST00000494317 ASXL2Q76L83 1435 aa38.71■■■■□ 3.79
LCN2-207ENST00000494317 PLB1Q6P1J6 1458 aa38.67■■■■□ 3.78
LCN2-207ENST00000494317 GOLGA3Q08378 1498 aa38.66■■■■□ 3.78
LCN2-207ENST00000494317 KDM5BQ9UGL1 1544 aa38.64■■■■□ 3.78
LCN2-207ENST00000494317 TSPOAP1O95153 1857 aa38.61■■■■□ 3.77
LCN2-207ENST00000494317 CSRNP3Q8WYN3 585 aa38.61■■■■□ 3.77
LCN2-207ENST00000494317 ZCCHC11Q5TAX3 1644 aaKnown RBP38.56■■■■□ 3.76
LCN2-207ENST00000494317 GLI2P10070 1586 aa38.55■■■■□ 3.76
LCN2-207ENST00000494317 AEBP2Q6ZN18 517 aaPredicted RBP38.54■■■■□ 3.76
LCN2-207ENST00000494317 KDM6BO15054 1643 aa38.51■■■■□ 3.76
LCN2-207ENST00000494317 EEA1Q15075 1411 aa38.49■■■■□ 3.75
LCN2-207ENST00000494317 EPRSP07814 1512 aaKnown RBP38.47■■■■□ 3.75
LCN2-207ENST00000494317 ABCA8O94911 1581 aa38.46■■■■□ 3.75
LCN2-207ENST00000494317 PPRC1Q5VV67 1664 aaKnown RBP38.42■■■■□ 3.74
LCN2-207ENST00000494317 WDR7Q9Y4E6 1490 aa38.37■■■■□ 3.73
LCN2-207ENST00000494317 P3H3Q8IVL6 736 aa38.37■■■■□ 3.73
LCN2-207ENST00000494317 FAM9AQ8IZU1 332 aaPredicted RBP38.35■■■■□ 3.73
LCN2-207ENST00000494317 MAP3K4Q9Y6R4 1608 aa38.34■■■■□ 3.73
LCN2-207ENST00000494317 SAMD9Q5K651 1589 aa38.3■■■■□ 3.72
LCN2-207ENST00000494317 TEX14Q8IWB6 1497 aa38.22■■■■□ 3.71
LCN2-207ENST00000494317 ARID3CA6NKF2 412 aa38.18■■■■□ 3.7
LCN2-207ENST00000494317 KCNH8Q96L42 1107 aa38.18■■■■□ 3.7
LCN2-207ENST00000494317 KIF21BO75037 1637 aa38.17■■■■□ 3.7
LCN2-207ENST00000494317 RANGAP1P46060 587 aaPredicted RBP38.17■■■■□ 3.7
LCN2-207ENST00000494317 CHIC1Q5VXU3 224 aa38.16■■■■□ 3.7
LCN2-207ENST00000494317 COL17A1Q9UMD9 1497 aaPredicted RBP38.15■■■■□ 3.7
LCN2-207ENST00000494317 ATP10BO94823 1461 aa38.14■■■■□ 3.7
LCN2-207ENST00000494317 CD109Q6YHK3 1445 aa38.11■■■■□ 3.69
LCN2-207ENST00000494317 CFAP43Q8NDM7 1665 aa38.09■■■■□ 3.69
LCN2-207ENST00000494317 RAPGEF6Q8TEU7 1601 aa38.09■■■■□ 3.69
LCN2-207ENST00000494317 FHOD3Q2V2M9 1422 aa38.07■■■■□ 3.69
LCN2-207ENST00000494317 MAGI3Q5TCQ9 1506 aa38.06■■■■□ 3.68
LCN2-207ENST00000494317 KDM4FA0A1W2PPD8 638 aa38.01■■■■□ 3.68
LCN2-207ENST00000494317 EFCAB5A4FU69 1503 aa37.97■■■■□ 3.67
LCN2-207ENST00000494317 NUP153P49790 1475 aaKnown RBP37.97■■■■□ 3.67
LCN2-207ENST00000494317 EHMT2Q96KQ7 1210 aa37.94■■■■□ 3.66
LCN2-207ENST00000494317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.93■■■■□ 3.66
LCN2-207ENST00000494317 HNRNPUL2Q1KMD3 747 aaKnown RBP37.93■■■■□ 3.66
LCN2-207ENST00000494317 UBTFP17480 764 aaKnown RBP37.89■■■■□ 3.66
LCN2-207ENST00000494317 ABCA9Q8IUA7 1624 aa37.87■■■■□ 3.65
LCN2-207ENST00000494317 ADGRL1O94910 1474 aa37.79■■■■□ 3.64
LCN2-207ENST00000494317 ARAP3Q8WWN8 1544 aa37.75■■■■□ 3.63
LCN2-207ENST00000494317 PLEKHD1A6NEE1 506 aa37.72■■■■□ 3.63
LCN2-207ENST00000494317 PHLDB1Q86UU1 1377 aa37.69■■■■□ 3.62
LCN2-207ENST00000494317 ARHGAP35Q9NRY4 1499 aa37.69■■■■□ 3.62
LCN2-207ENST00000494317 NEO1Q92859 1461 aa37.65■■■■□ 3.62
LCN2-207ENST00000494317 FMN1Q68DA7 1419 aa37.63■■■■□ 3.61
LCN2-207ENST00000494317 CDK13Q14004 1512 aaKnown RBP37.63■■■■□ 3.61
LCN2-207ENST00000494317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.56■■■■□ 3.6
LCN2-207ENST00000494317 RAPGEF3O95398 923 aa37.56■■■■□ 3.6
LCN2-207ENST00000494317 ATP1B4Q9UN42 357 aaPredicted RBP37.55■■■■□ 3.6
LCN2-207ENST00000494317 HECW1Q76N89 1606 aa37.54■■■■□ 3.6
LCN2-207ENST00000494317 TTC37Q6PGP7 1564 aa37.51■■■■□ 3.6
LCN2-207ENST00000494317 FRMPD1Q5SYB0 1578 aa37.47■■■■□ 3.59
LCN2-207ENST00000494317 FANCAO15360 1455 aa37.45■■■■□ 3.59
LCN2-207ENST00000494317 AKNAQ7Z591 1439 aa37.44■■■■□ 3.58
LCN2-207ENST00000494317 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
LCN2-207ENST00000494317 DENND4BO75064 1496 aaPredicted RBP37.39■■■■□ 3.58
LCN2-207ENST00000494317 CDK11AQ9UQ88 783 aaPredicted RBP37.37■■■■□ 3.57
LCN2-207ENST00000494317 PLCH2O75038 1416 aa37.33■■■■□ 3.57
LCN2-207ENST00000494317 RICTORQ6R327 1708 aa37.33■■■■□ 3.57
LCN2-207ENST00000494317 LRRIQ1Q96JM4 1722 aa37.3■■■■□ 3.56
LCN2-207ENST00000494317 TROQ12816 1431 aaPredicted RBP37.29■■■■□ 3.56
LCN2-207ENST00000494317 KIF14Q15058 1648 aa37.28■■■■□ 3.56
LCN2-207ENST00000494317 PCF11O94913 1555 aaKnown RBP37.27■■■■□ 3.56
LCN2-207ENST00000494317 CASKIN1Q8WXD9 1431 aa37.27■■■■□ 3.56
LCN2-207ENST00000494317 ARHGEF40Q8TER5 1519 aa37.26■■■■□ 3.56
LCN2-207ENST00000494317 CLIP1P30622 1438 aa37.23■■■■□ 3.55
LCN2-207ENST00000494317 MYO5CQ9NQX4 1742 aa37.22■■■■□ 3.55
LCN2-207ENST00000494317 ZMYM4Q5VZL5 1548 aa37.21■■■■□ 3.55
LCN2-207ENST00000494317 SCAPERQ9BY12 1400 aa37.2■■■■□ 3.55
LCN2-207ENST00000494317 ARID4BQ4LE39 1312 aaPredicted RBP37.2■■■■□ 3.55
LCN2-207ENST00000494317 ADAMTSL3P82987 1691 aa37.2■■■■□ 3.55
LCN2-207ENST00000494317 EFCAB2Q5VUJ9 269 aa37.19■■■■□ 3.54
LCN2-207ENST00000494317 CCDC18Q5T9S5 1454 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms