RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
NXF3-206ENST00000494300 TPRNQ4KMQ1 711 aa10.43□□□□□ -0.74
NXF3-206ENST00000494300 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
NXF3-206ENST00000494300 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
NXF3-206ENST00000494300 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
NXF3-206ENST00000494300 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
NXF3-206ENST00000494300 HOMEZQ8IX15 550 aa10.35□□□□□ -0.75
NXF3-206ENST00000494300 CUX2O14529 1486 aa10.35□□□□□ -0.75
NXF3-206ENST00000494300 PRDM2Q13029 1718 aa10.33□□□□□ -0.76
NXF3-206ENST00000494300 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
NXF3-206ENST00000494300 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
NXF3-206ENST00000494300 SPDYE2Q495Y8 402 aa10.33□□□□□ -0.76
NXF3-206ENST00000494300 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
NXF3-206ENST00000494300 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
NXF3-206ENST00000494300 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
NXF3-206ENST00000494300 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
NXF3-206ENST00000494300 WDR62O43379 1518 aa10.28□□□□□ -0.76
NXF3-206ENST00000494300 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
NXF3-206ENST00000494300 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
NXF3-206ENST00000494300 URB2Q14146 1524 aaKnown RBP10.24□□□□□ -0.77
NXF3-206ENST00000494300 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
NXF3-206ENST00000494300 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
NXF3-206ENST00000494300 FKBP8Q14318 412 aa10.23□□□□□ -0.77
NXF3-206ENST00000494300 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
NXF3-206ENST00000494300 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
NXF3-206ENST00000494300 SSUH2Q9Y2M2 353 aa10.21□□□□□ -0.77
NXF3-206ENST00000494300 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
NXF3-206ENST00000494300 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
NXF3-206ENST00000494300 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
NXF3-206ENST00000494300 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
NXF3-206ENST00000494300 RANGAP1P46060 587 aaPredicted RBP10.15□□□□□ -0.78
NXF3-206ENST00000494300 CUX1P39880 1505 aa10.14□□□□□ -0.79
NXF3-206ENST00000494300 FGD5Q6ZNL6 1462 aa10.14□□□□□ -0.79
NXF3-206ENST00000494300 SOGA1O94964 1423 aa10.14□□□□□ -0.79
NXF3-206ENST00000494300 POLA1P09884 1462 aaPredicted RBP10.13□□□□□ -0.79
NXF3-206ENST00000494300 TOP2BQ02880 1626 aa10.09□□□□□ -0.79
NXF3-206ENST00000494300 RAD54L2Q9Y4B4 1467 aa10.09□□□□□ -0.79
NXF3-206ENST00000494300 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
NXF3-206ENST00000494300 BIVM-ERCC5R4GMW8 1640 aa10.07□□□□□ -0.8
NXF3-206ENST00000494300 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
NXF3-206ENST00000494300 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
NXF3-206ENST00000494300 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
NXF3-206ENST00000494300 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
NXF3-206ENST00000494300 TDRD9Q8NDG6 1382 aaKnown RBP10.06□□□□□ -0.8
NXF3-206ENST00000494300 CHRDL2Q6WN34 429 aa10.06□□□□□ -0.8
NXF3-206ENST00000494300 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
NXF3-206ENST00000494300 TARBP1Q13395 1621 aaKnown RBP10.06□□□□□ -0.8
NXF3-206ENST00000494300 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
NXF3-206ENST00000494300 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
NXF3-206ENST00000494300 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
NXF3-206ENST00000494300 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
NXF3-206ENST00000494300 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
NXF3-206ENST00000494300 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
NXF3-206ENST00000494300 PODXL2Q9NZ53 605 aa10.01□□□□□ -0.81
NXF3-206ENST00000494300 GRIN2BQ13224 1484 aa10.01□□□□□ -0.81
NXF3-206ENST00000494300 GAPVD1Q14C86 1478 aa10.01□□□□□ -0.81
NXF3-206ENST00000494300 TTBK1Q5TCY1 1321 aaPredicted RBP10.01□□□□□ -0.81
NXF3-206ENST00000494300 PROM2Q8N271 834 aa9.98□□□□□ -0.81
NXF3-206ENST00000494300 CHMP7Q8WUX9 453 aaPredicted RBP9.98□□□□□ -0.81
NXF3-206ENST00000494300 KIF27Q86VH2 1401 aa9.98□□□□□ -0.81
NXF3-206ENST00000494300 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
NXF3-206ENST00000494300 MAGI1Q96QZ7 1491 aaPredicted RBP9.97□□□□□ -0.81
NXF3-206ENST00000494300 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.82
NXF3-206ENST00000494300 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.82
NXF3-206ENST00000494300 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
NXF3-206ENST00000494300 STAG3Q9UJ98 1225 aa9.95□□□□□ -0.82
NXF3-206ENST00000494300 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
NXF3-206ENST00000494300 PBRM1Q86U86 1689 aa9.93□□□□□ -0.82
NXF3-206ENST00000494300 SYNJ2O15056 1496 aa9.93□□□□□ -0.82
NXF3-206ENST00000494300 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
NXF3-206ENST00000494300 ERICH3Q5RHP9 1530 aa9.92□□□□□ -0.82
NXF3-206ENST00000494300 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.82
NXF3-206ENST00000494300 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
NXF3-206ENST00000494300 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
NXF3-206ENST00000494300 POTEHQ6S545 545 aa9.89□□□□□ -0.83
NXF3-206ENST00000494300 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
NXF3-206ENST00000494300 CHD1O14646 1710 aa9.87□□□□□ -0.83
NXF3-206ENST00000494300 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
NXF3-206ENST00000494300 IGF1RP08069 1367 aa9.87□□□□□ -0.83
NXF3-206ENST00000494300 GRIN2AQ12879 1464 aa9.86□□□□□ -0.83
NXF3-206ENST00000494300 CUL7Q14999 1698 aa9.86□□□□□ -0.83
NXF3-206ENST00000494300 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
NXF3-206ENST00000494300 EEA1Q15075 1411 aa9.84□□□□□ -0.83
NXF3-206ENST00000494300 PRKAR2AP13861 404 aaKnown RBP9.83□□□□□ -0.84
NXF3-206ENST00000494300 MYT1Q01538 1121 aa9.82□□□□□ -0.84
NXF3-206ENST00000494300 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
NXF3-206ENST00000494300 RUSC2Q8N2Y8 1516 aa9.81□□□□□ -0.84
NXF3-206ENST00000494300 CHADLQ6NUI6 762 aa9.8□□□□□ -0.84
NXF3-206ENST00000494300 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
NXF3-206ENST00000494300 RAPGEF2Q9Y4G8 1499 aa9.79□□□□□ -0.84
NXF3-206ENST00000494300 NUP160Q12769 1436 aa9.79□□□□□ -0.84
NXF3-206ENST00000494300 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.84
NXF3-206ENST00000494300 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.85
NXF3-206ENST00000494300 CEP170Q5SW79 1584 aa9.76□□□□□ -0.85
NXF3-206ENST00000494300 CREBZFQ9NS37 354 aa9.75□□□□□ -0.85
NXF3-206ENST00000494300 ARHGEF11O15085 1522 aa9.75□□□□□ -0.85
NXF3-206ENST00000494300 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
NXF3-206ENST00000494300 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
NXF3-206ENST00000494300 MIER1Q8N108 512 aa9.73□□□□□ -0.85
NXF3-206ENST00000494300 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms