RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
SAPCD1-211ENST00000494299 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
SAPCD1-211ENST00000494299 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
SAPCD1-211ENST00000494299 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
SAPCD1-211ENST00000494299 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
SAPCD1-211ENST00000494299 IQGAP2Q13576 1575 aa22.67■■□□□ 1.22
SAPCD1-211ENST00000494299 UGGT2Q9NYU1 1516 aa22.62■■□□□ 1.21
SAPCD1-211ENST00000494299 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
SAPCD1-211ENST00000494299 ADCY10Q96PN6 1610 aa22.58■■□□□ 1.21
SAPCD1-211ENST00000494299 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
SAPCD1-211ENST00000494299 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
SAPCD1-211ENST00000494299 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
SAPCD1-211ENST00000494299 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
SAPCD1-211ENST00000494299 EEA1Q15075 1411 aa22.52■■□□□ 1.2
SAPCD1-211ENST00000494299 MAPKBP1O60336 1514 aa22.52■■□□□ 1.19
SAPCD1-211ENST00000494299 PTPRGP23470 1445 aa22.5■■□□□ 1.19
SAPCD1-211ENST00000494299 KIAA0556O60303 1618 aa22.48■■□□□ 1.19
SAPCD1-211ENST00000494299 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
SAPCD1-211ENST00000494299 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
SAPCD1-211ENST00000494299 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
SAPCD1-211ENST00000494299 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
SAPCD1-211ENST00000494299 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
SAPCD1-211ENST00000494299 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
SAPCD1-211ENST00000494299 UACAQ9BZF9 1416 aa22.38■■□□□ 1.17
SAPCD1-211ENST00000494299 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
SAPCD1-211ENST00000494299 DIP2BQ9P265 1576 aa22.37■■□□□ 1.17
SAPCD1-211ENST00000494299 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
SAPCD1-211ENST00000494299 NPM1P06748 294 aaKnown RBP eCLIP22.34■■□□□ 1.17
SAPCD1-211ENST00000494299 KIF21BO75037 1637 aa22.33■■□□□ 1.17
SAPCD1-211ENST00000494299 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
SAPCD1-211ENST00000494299 ABCA8O94911 1581 aa22.29■■□□□ 1.16
SAPCD1-211ENST00000494299 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
SAPCD1-211ENST00000494299 ZCCHC11Q5TAX3 1644 aaKnown RBP22.24■■□□□ 1.15
SAPCD1-211ENST00000494299 ASXL2Q76L83 1435 aa22.24■■□□□ 1.15
SAPCD1-211ENST00000494299 GLI2P10070 1586 aa22.24■■□□□ 1.15
SAPCD1-211ENST00000494299 FAM69CQ0P6D2 419 aa22.23■■□□□ 1.15
SAPCD1-211ENST00000494299 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
SAPCD1-211ENST00000494299 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
SAPCD1-211ENST00000494299 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
SAPCD1-211ENST00000494299 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.14
SAPCD1-211ENST00000494299 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
SAPCD1-211ENST00000494299 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
SAPCD1-211ENST00000494299 MAP3K4Q9Y6R4 1608 aa22.11■■□□□ 1.13
SAPCD1-211ENST00000494299 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
SAPCD1-211ENST00000494299 ATP10BO94823 1461 aa22.07■■□□□ 1.12
SAPCD1-211ENST00000494299 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
SAPCD1-211ENST00000494299 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
SAPCD1-211ENST00000494299 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
SAPCD1-211ENST00000494299 NUP153P49790 1475 aaKnown RBP22.02■■□□□ 1.12
SAPCD1-211ENST00000494299 CFAP43Q8NDM7 1665 aa21.99■■□□□ 1.11
SAPCD1-211ENST00000494299 KDM6BO15054 1643 aa21.98■■□□□ 1.11
SAPCD1-211ENST00000494299 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
SAPCD1-211ENST00000494299 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SAPCD1-211ENST00000494299 TEX14Q8IWB6 1497 aa21.93■■□□□ 1.1
SAPCD1-211ENST00000494299 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
SAPCD1-211ENST00000494299 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
SAPCD1-211ENST00000494299 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
SAPCD1-211ENST00000494299 CD109Q6YHK3 1445 aa21.89■■□□□ 1.1
SAPCD1-211ENST00000494299 FMN1Q68DA7 1419 aa21.87■■□□□ 1.09
SAPCD1-211ENST00000494299 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
SAPCD1-211ENST00000494299 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
SAPCD1-211ENST00000494299 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
SAPCD1-211ENST00000494299 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
SAPCD1-211ENST00000494299 HECW1Q76N89 1606 aa21.78■■□□□ 1.08
SAPCD1-211ENST00000494299 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
SAPCD1-211ENST00000494299 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
SAPCD1-211ENST00000494299 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
SAPCD1-211ENST00000494299 LRRIQ1Q96JM4 1722 aa21.76■■□□□ 1.07
SAPCD1-211ENST00000494299 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
SAPCD1-211ENST00000494299 NEO1Q92859 1461 aa21.73■■□□□ 1.07
SAPCD1-211ENST00000494299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
SAPCD1-211ENST00000494299 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
SAPCD1-211ENST00000494299 TTC37Q6PGP7 1564 aa21.69■■□□□ 1.06
SAPCD1-211ENST00000494299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
SAPCD1-211ENST00000494299 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SAPCD1-211ENST00000494299 CLIP1P30622 1438 aa21.68■■□□□ 1.06
SAPCD1-211ENST00000494299 PCF11O94913 1555 aaKnown RBP21.67■■□□□ 1.06
SAPCD1-211ENST00000494299 AEBP2Q6ZN18 517 aaPredicted RBP21.65■■□□□ 1.06
SAPCD1-211ENST00000494299 KDM4FA0A1W2PPD8 638 aa21.64■■□□□ 1.05
SAPCD1-211ENST00000494299 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
SAPCD1-211ENST00000494299 FRMPD1Q5SYB0 1578 aa21.63■■□□□ 1.05
SAPCD1-211ENST00000494299 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
SAPCD1-211ENST00000494299 CCDC18Q5T9S5 1454 aa21.62■■□□□ 1.05
SAPCD1-211ENST00000494299 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
SAPCD1-211ENST00000494299 PLCH2O75038 1416 aa21.6■■□□□ 1.05
SAPCD1-211ENST00000494299 KIF14Q15058 1648 aa21.59■■□□□ 1.05
SAPCD1-211ENST00000494299 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
SAPCD1-211ENST00000494299 FANCAO15360 1455 aa21.58■■□□□ 1.05
SAPCD1-211ENST00000494299 RICTORQ6R327 1708 aa21.58■■□□□ 1.05
SAPCD1-211ENST00000494299 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
SAPCD1-211ENST00000494299 MYO5CQ9NQX4 1742 aa21.55■■□□□ 1.04
SAPCD1-211ENST00000494299 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
SAPCD1-211ENST00000494299 ADGRL1O94910 1474 aa21.52■■□□□ 1.04
SAPCD1-211ENST00000494299 ZMYM4Q5VZL5 1548 aa21.52■■□□□ 1.04
SAPCD1-211ENST00000494299 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
SAPCD1-211ENST00000494299 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.03
SAPCD1-211ENST00000494299 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
SAPCD1-211ENST00000494299 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
SAPCD1-211ENST00000494299 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
SAPCD1-211ENST00000494299 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms