RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 KIAA0586Q9BVV6 1533 aa34.92■■■■□ 3.18
STX1A-212ENST00000494245 IQGAP2Q13576 1575 aa34.87■■■■□ 3.17
STX1A-212ENST00000494245 SHROOM2Q13796 1616 aa34.8■■■■□ 3.16
STX1A-212ENST00000494245 UBTFP17480 764 aaKnown RBP34.78■■■■□ 3.16
STX1A-212ENST00000494245 EHMT2Q96KQ7 1210 aa34.77■■■■□ 3.16
STX1A-212ENST00000494245 JPH4Q96JJ6 628 aa34.68■■■■□ 3.14
STX1A-212ENST00000494245 UGGT2Q9NYU1 1516 aa34.68■■■■□ 3.14
STX1A-212ENST00000494245 TNIKQ9UKE5 1360 aa34.66■■■■□ 3.14
STX1A-212ENST00000494245 PRG4Q92954 1404 aaPredicted RBP34.58■■■■□ 3.13
STX1A-212ENST00000494245 LOC105371045A0A1W2PR82 267 aa34.58■■■■□ 3.13
STX1A-212ENST00000494245 CARMIL2Q6F5E8 1435 aa34.55■■■■□ 3.12
STX1A-212ENST00000494245 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
STX1A-212ENST00000494245 KIAA0556O60303 1618 aa34.52■■■■□ 3.12
STX1A-212ENST00000494245 DNAJC5Q9H3Z4 198 aa34.52■■■■□ 3.12
STX1A-212ENST00000494245 SAMD9Q5K651 1589 aa34.52■■■■□ 3.12
STX1A-212ENST00000494245 EFCAB5A4FU69 1503 aa34.51■■■■□ 3.12
STX1A-212ENST00000494245 RIMBP3CA6NJZ7 1639 aa34.51■■■■□ 3.11
STX1A-212ENST00000494245 RIMBP3BA6NNM3 1639 aa34.51■■■■□ 3.11
STX1A-212ENST00000494245 RIMBP3Q9UFD9 1639 aa34.51■■■■□ 3.11
STX1A-212ENST00000494245 DISP1Q96F81 1524 aa34.5■■■■□ 3.11
STX1A-212ENST00000494245 ERCC6L2Q5T890 1561 aa34.49■■■■□ 3.11
STX1A-212ENST00000494245 RANGAP1P46060 587 aaPredicted RBP34.39■■■■□ 3.1
STX1A-212ENST00000494245 CLIP1P30622 1438 aa34.37■■■■□ 3.09
STX1A-212ENST00000494245 CEP162Q5TB80 1403 aa34.37■■■■□ 3.09
STX1A-212ENST00000494245 ARHGAP35Q9NRY4 1499 aa34.34■■■■□ 3.09
STX1A-212ENST00000494245 ARAP1Q96P48 1450 aa34.3■■■■□ 3.08
STX1A-212ENST00000494245 PTPRGP23470 1445 aa34.26■■■■□ 3.07
STX1A-212ENST00000494245 FHOD3Q2V2M9 1422 aa34.26■■■■□ 3.07
STX1A-212ENST00000494245 P3H3Q8IVL6 736 aa34.25■■■■□ 3.07
STX1A-212ENST00000494245 FMN1Q68DA7 1419 aa34.15■■■■□ 3.06
STX1A-212ENST00000494245 TTBK1Q5TCY1 1321 aaPredicted RBP34.12■■■■□ 3.05
STX1A-212ENST00000494245 CYB5RLQ6IPT4 315 aa34.09■■■■□ 3.05
STX1A-212ENST00000494245 ABCA8O94911 1581 aa34.08■■■■□ 3.05
STX1A-212ENST00000494245 UACAQ9BZF9 1416 aa34.07■■■■□ 3.04
STX1A-212ENST00000494245 RAPGEF6Q8TEU7 1601 aa34.07■■■■□ 3.04
STX1A-212ENST00000494245 UHRF1BP1LA0JNW5 1464 aa34.04■■■■□ 3.04
STX1A-212ENST00000494245 ABCC2Q92887 1545 aa34.04■■■■□ 3.04
STX1A-212ENST00000494245 PLB1Q6P1J6 1458 aa34.03■■■■□ 3.04
STX1A-212ENST00000494245 ADCY10Q96PN6 1610 aa34.02■■■■□ 3.04
STX1A-212ENST00000494245 HECW1Q76N89 1606 aa33.96■■■■□ 3.03
STX1A-212ENST00000494245 PCF11O94913 1555 aaKnown RBP33.95■■■■□ 3.03
STX1A-212ENST00000494245 VPS8Q8N3P4 1428 aa33.94■■■■□ 3.02
STX1A-212ENST00000494245 CASKIN1Q8WXD9 1431 aa33.92■■■■□ 3.02
STX1A-212ENST00000494245 FYCO1Q9BQS8 1478 aa33.92■■■■□ 3.02
STX1A-212ENST00000494245 NUP153P49790 1475 aaKnown RBP33.87■■■■□ 3.01
STX1A-212ENST00000494245 KDM5BQ9UGL1 1544 aa33.86■■■■□ 3.01
STX1A-212ENST00000494245 ZCCHC11Q5TAX3 1644 aaKnown RBP33.83■■■■□ 3.01
STX1A-212ENST00000494245 NPM1P06748 294 aaKnown RBP eCLIP33.82■■■■□ 3
STX1A-212ENST00000494245 LRRIQ1Q96JM4 1722 aa33.79■■■■□ 3
STX1A-212ENST00000494245 CCDC18Q5T9S5 1454 aa33.78■■■■□ 3
STX1A-212ENST00000494245 ATP1B4Q9UN42 357 aaPredicted RBP33.77■■■■□ 3
STX1A-212ENST00000494245 EPRSP07814 1512 aaKnown RBP33.76■■■■□ 3
STX1A-212ENST00000494245 ATP10BO94823 1461 aa33.76■■■□□ 2.99
STX1A-212ENST00000494245 MAPKBP1O60336 1514 aa33.71■■■□□ 2.99
STX1A-212ENST00000494245 CDK13Q14004 1512 aaKnown RBP33.69■■■□□ 2.98
STX1A-212ENST00000494245 CFAP43Q8NDM7 1665 aa33.66■■■□□ 2.98
STX1A-212ENST00000494245 ARID3CA6NKF2 412 aa33.65■■■□□ 2.98
STX1A-212ENST00000494245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.64■■■□□ 2.98
STX1A-212ENST00000494245 HNRNPUL2Q1KMD3 747 aaKnown RBP33.64■■■□□ 2.98
STX1A-212ENST00000494245 MAP3K1Q13233 1512 aa33.61■■■□□ 2.97
STX1A-212ENST00000494245 ASXL2Q76L83 1435 aa33.6■■■□□ 2.97
STX1A-212ENST00000494245 TIAM1Q13009 1591 aa33.6■■■□□ 2.97
STX1A-212ENST00000494245 CDK11AQ9UQ88 783 aaPredicted RBP33.59■■■□□ 2.97
STX1A-212ENST00000494245 WDR7Q9Y4E6 1490 aa33.56■■■□□ 2.96
STX1A-212ENST00000494245 APLP2Q06481 763 aa33.54■■■□□ 2.96
STX1A-212ENST00000494245 PLEKHD1A6NEE1 506 aa33.53■■■□□ 2.96
STX1A-212ENST00000494245 TROQ12816 1431 aaPredicted RBP33.47■■■□□ 2.95
STX1A-212ENST00000494245 EHBP1L1Q8N3D4 1523 aa33.46■■■□□ 2.95
STX1A-212ENST00000494245 MAGI3Q5TCQ9 1506 aa33.44■■■□□ 2.94
STX1A-212ENST00000494245 MTUS2Q5JR59 1369 aa33.43■■■□□ 2.94
STX1A-212ENST00000494245 DIP2BQ9P265 1576 aa33.43■■■□□ 2.94
STX1A-212ENST00000494245 ABCC10Q5T3U5 1492 aa33.42■■■□□ 2.94
STX1A-212ENST00000494245 KIF14Q15058 1648 aa33.41■■■□□ 2.94
STX1A-212ENST00000494245 LRRC9Q6ZRR7 1453 aa33.4■■■□□ 2.94
STX1A-212ENST00000494245 KIF13AQ9H1H9 1805 aa33.39■■■□□ 2.94
STX1A-212ENST00000494245 GLI2P10070 1586 aa33.38■■■□□ 2.93
STX1A-212ENST00000494245 SUPT6HQ7KZ85 1726 aaKnown RBP33.33■■■□□ 2.93
STX1A-212ENST00000494245 ABCA9Q8IUA7 1624 aa33.33■■■□□ 2.93
STX1A-212ENST00000494245 KCNH8Q96L42 1107 aa33.33■■■□□ 2.93
STX1A-212ENST00000494245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.28■■■□□ 2.92
STX1A-212ENST00000494245 FAM69CQ0P6D2 419 aa33.26■■■□□ 2.91
STX1A-212ENST00000494245 KANK4Q5T7N3 995 aaPredicted RBP33.26■■■□□ 2.91
STX1A-212ENST00000494245 MAP3K4Q9Y6R4 1608 aa33.26■■■□□ 2.91
STX1A-212ENST00000494245 TTC37Q6PGP7 1564 aa33.25■■■□□ 2.91
STX1A-212ENST00000494245 MYO5CQ9NQX4 1742 aa33.22■■■□□ 2.91
STX1A-212ENST00000494245 TRHP20396 242 aaPredicted RBP33.21■■■□□ 2.91
STX1A-212ENST00000494245 NCOA2Q15596 1464 aa33.19■■■□□ 2.9
STX1A-212ENST00000494245 CD109Q6YHK3 1445 aa33.16■■■□□ 2.9
STX1A-212ENST00000494245 ITSN2Q9NZM3 1697 aa33.16■■■□□ 2.9
STX1A-212ENST00000494245 CDC42BPAQ5VT25 1732 aa33.15■■■□□ 2.9
STX1A-212ENST00000494245 TSPOAP1O95153 1857 aa33.14■■■□□ 2.9
STX1A-212ENST00000494245 PREX2Q70Z35 1606 aa33.13■■■□□ 2.89
STX1A-212ENST00000494245 ARAP3Q8WWN8 1544 aa33.12■■■□□ 2.89
STX1A-212ENST00000494245 CCNB3Q8WWL7 1395 aa33.11■■■□□ 2.89
STX1A-212ENST00000494245 PPRC1Q5VV67 1664 aaKnown RBP33.09■■■□□ 2.89
STX1A-212ENST00000494245 CDC42BPBQ9Y5S2 1711 aa33.08■■■□□ 2.89
STX1A-212ENST00000494245 PLCH2O75038 1416 aa33.08■■■□□ 2.89
STX1A-212ENST00000494245 CFAP74Q9C0B2 1584 aa33.07■■■□□ 2.88
STX1A-212ENST00000494245 TEX14Q8IWB6 1497 aa33.06■■■□□ 2.88
STX1A-212ENST00000494245 GPATCH8Q9UKJ3 1502 aaKnown RBP33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms