RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PRG4Q92954 1404 aaPredicted RBP23.31■■□□□ 1.32
CTDSP1-212ENST00000494067 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
CTDSP1-212ENST00000494067 KIAA0586Q9BVV6 1533 aa23.22■■□□□ 1.31
CTDSP1-212ENST00000494067 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
CTDSP1-212ENST00000494067 ADCY10Q96PN6 1610 aa23.12■■□□□ 1.29
CTDSP1-212ENST00000494067 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
CTDSP1-212ENST00000494067 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
CTDSP1-212ENST00000494067 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
CTDSP1-212ENST00000494067 DISP1Q96F81 1524 aa22.99■■□□□ 1.27
CTDSP1-212ENST00000494067 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
CTDSP1-212ENST00000494067 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CTDSP1-212ENST00000494067 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
CTDSP1-212ENST00000494067 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
CTDSP1-212ENST00000494067 UGGT2Q9NYU1 1516 aa22.93■■□□□ 1.26
CTDSP1-212ENST00000494067 PTPRGP23470 1445 aa22.92■■□□□ 1.26
CTDSP1-212ENST00000494067 ABCC10Q5T3U5 1492 aa22.92■■□□□ 1.26
CTDSP1-212ENST00000494067 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
CTDSP1-212ENST00000494067 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
CTDSP1-212ENST00000494067 CARMIL2Q6F5E8 1435 aa22.9■■□□□ 1.26
CTDSP1-212ENST00000494067 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
CTDSP1-212ENST00000494067 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
CTDSP1-212ENST00000494067 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
CTDSP1-212ENST00000494067 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
CTDSP1-212ENST00000494067 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
CTDSP1-212ENST00000494067 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
CTDSP1-212ENST00000494067 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
CTDSP1-212ENST00000494067 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
CTDSP1-212ENST00000494067 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
CTDSP1-212ENST00000494067 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
CTDSP1-212ENST00000494067 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-212ENST00000494067 PLB1Q6P1J6 1458 aa22.71■■□□□ 1.23
CTDSP1-212ENST00000494067 ABCA8O94911 1581 aa22.67■■□□□ 1.22
CTDSP1-212ENST00000494067 GLI2P10070 1586 aa22.67■■□□□ 1.22
CTDSP1-212ENST00000494067 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
CTDSP1-212ENST00000494067 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
CTDSP1-212ENST00000494067 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
CTDSP1-212ENST00000494067 KDM6BO15054 1643 aa22.63■■□□□ 1.21
CTDSP1-212ENST00000494067 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
CTDSP1-212ENST00000494067 SAMD9Q5K651 1589 aa22.62■■□□□ 1.21
CTDSP1-212ENST00000494067 MAP3K4Q9Y6R4 1608 aa22.61■■□□□ 1.21
CTDSP1-212ENST00000494067 EEA1Q15075 1411 aa22.58■■□□□ 1.21
CTDSP1-212ENST00000494067 FAM9AQ8IZU1 332 aaPredicted RBP22.56■■□□□ 1.2
CTDSP1-212ENST00000494067 WDR7Q9Y4E6 1490 aa22.54■■□□□ 1.2
CTDSP1-212ENST00000494067 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
CTDSP1-212ENST00000494067 KIF21BO75037 1637 aa22.53■■□□□ 1.2
CTDSP1-212ENST00000494067 COL17A1Q9UMD9 1497 aaPredicted RBP22.5■■□□□ 1.19
CTDSP1-212ENST00000494067 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
CTDSP1-212ENST00000494067 ATP10BO94823 1461 aa22.45■■□□□ 1.18
CTDSP1-212ENST00000494067 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
CTDSP1-212ENST00000494067 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
CTDSP1-212ENST00000494067 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
CTDSP1-212ENST00000494067 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
CTDSP1-212ENST00000494067 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
CTDSP1-212ENST00000494067 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
CTDSP1-212ENST00000494067 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
CTDSP1-212ENST00000494067 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
CTDSP1-212ENST00000494067 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
CTDSP1-212ENST00000494067 EHMT2Q96KQ7 1210 aa22.35■■□□□ 1.17
CTDSP1-212ENST00000494067 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
CTDSP1-212ENST00000494067 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
CTDSP1-212ENST00000494067 KDM4FA0A1W2PPD8 638 aa22.32■■□□□ 1.16
CTDSP1-212ENST00000494067 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
CTDSP1-212ENST00000494067 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
CTDSP1-212ENST00000494067 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-212ENST00000494067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-212ENST00000494067 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-212ENST00000494067 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-212ENST00000494067 ADGRL1O94910 1474 aa22.2■■□□□ 1.14
CTDSP1-212ENST00000494067 ARAP3Q8WWN8 1544 aa22.17■■□□□ 1.14
CTDSP1-212ENST00000494067 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
CTDSP1-212ENST00000494067 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
CTDSP1-212ENST00000494067 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
CTDSP1-212ENST00000494067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.14
CTDSP1-212ENST00000494067 HECW1Q76N89 1606 aa22.11■■□□□ 1.13
CTDSP1-212ENST00000494067 NEO1Q92859 1461 aa22.09■■□□□ 1.13
CTDSP1-212ENST00000494067 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
CTDSP1-212ENST00000494067 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
CTDSP1-212ENST00000494067 RICTORQ6R327 1708 aa22.05■■□□□ 1.12
CTDSP1-212ENST00000494067 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
CTDSP1-212ENST00000494067 KIF14Q15058 1648 aa22.04■■□□□ 1.12
CTDSP1-212ENST00000494067 PCF11O94913 1555 aaKnown RBP22.03■■□□□ 1.12
CTDSP1-212ENST00000494067 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
CTDSP1-212ENST00000494067 FANCAO15360 1455 aa22■■□□□ 1.11
CTDSP1-212ENST00000494067 CFAP74Q9C0B2 1584 aa21.99■■□□□ 1.11
CTDSP1-212ENST00000494067 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
CTDSP1-212ENST00000494067 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
CTDSP1-212ENST00000494067 SIGLEC1Q9BZZ2 1709 aa21.96■■□□□ 1.11
CTDSP1-212ENST00000494067 MYO5CQ9NQX4 1742 aa21.95■■□□□ 1.1
CTDSP1-212ENST00000494067 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
CTDSP1-212ENST00000494067 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
CTDSP1-212ENST00000494067 ADAMTSL3P82987 1691 aa21.92■■□□□ 1.1
CTDSP1-212ENST00000494067 PLCH2O75038 1416 aa21.92■■□□□ 1.1
CTDSP1-212ENST00000494067 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-212ENST00000494067 CASKIN1Q8WXD9 1431 aa21.92■■□□□ 1.1
CTDSP1-212ENST00000494067 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
CTDSP1-212ENST00000494067 BCORL1Q5H9F3 1711 aa21.89■■□□□ 1.09
CTDSP1-212ENST00000494067 CLIP1P30622 1438 aa21.88■■□□□ 1.09
CTDSP1-212ENST00000494067 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
CTDSP1-212ENST00000494067 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
CTDSP1-212ENST00000494067 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms