RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
RFC2-211ENST00000494019 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
RFC2-211ENST00000494019 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
RFC2-211ENST00000494019 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
RFC2-211ENST00000494019 KIF21BO75037 1637 aa16.85■□□□□ 0.29
RFC2-211ENST00000494019 KIAA0586Q9BVV6 1533 aa16.85■□□□□ 0.29
RFC2-211ENST00000494019 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
RFC2-211ENST00000494019 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
RFC2-211ENST00000494019 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
RFC2-211ENST00000494019 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
RFC2-211ENST00000494019 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
RFC2-211ENST00000494019 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
RFC2-211ENST00000494019 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
RFC2-211ENST00000494019 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
RFC2-211ENST00000494019 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
RFC2-211ENST00000494019 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
RFC2-211ENST00000494019 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
RFC2-211ENST00000494019 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
RFC2-211ENST00000494019 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
RFC2-211ENST00000494019 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
RFC2-211ENST00000494019 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
RFC2-211ENST00000494019 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
RFC2-211ENST00000494019 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
RFC2-211ENST00000494019 PTPRGP23470 1445 aa16.55■□□□□ 0.24
RFC2-211ENST00000494019 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
RFC2-211ENST00000494019 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
RFC2-211ENST00000494019 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
RFC2-211ENST00000494019 FHOD3Q2V2M9 1422 aa16.48■□□□□ 0.23
RFC2-211ENST00000494019 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
RFC2-211ENST00000494019 ABCA8O94911 1581 aa16.47■□□□□ 0.23
RFC2-211ENST00000494019 UACAQ9BZF9 1416 aa16.46■□□□□ 0.23
RFC2-211ENST00000494019 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
RFC2-211ENST00000494019 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
RFC2-211ENST00000494019 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
RFC2-211ENST00000494019 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
RFC2-211ENST00000494019 ZCCHC11Q5TAX3 1644 aaKnown RBP16.45■□□□□ 0.22
RFC2-211ENST00000494019 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
RFC2-211ENST00000494019 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
RFC2-211ENST00000494019 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
RFC2-211ENST00000494019 CLIP1P30622 1438 aa16.38■□□□□ 0.21
RFC2-211ENST00000494019 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
RFC2-211ENST00000494019 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
RFC2-211ENST00000494019 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
RFC2-211ENST00000494019 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
RFC2-211ENST00000494019 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
RFC2-211ENST00000494019 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
RFC2-211ENST00000494019 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
RFC2-211ENST00000494019 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
RFC2-211ENST00000494019 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
RFC2-211ENST00000494019 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
RFC2-211ENST00000494019 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
RFC2-211ENST00000494019 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
RFC2-211ENST00000494019 ATP10BO94823 1461 aa16.28■□□□□ 0.2
RFC2-211ENST00000494019 ABCC10Q5T3U5 1492 aa16.28■□□□□ 0.2
RFC2-211ENST00000494019 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
RFC2-211ENST00000494019 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.19
RFC2-211ENST00000494019 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
RFC2-211ENST00000494019 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
RFC2-211ENST00000494019 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
RFC2-211ENST00000494019 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
RFC2-211ENST00000494019 GLI2P10070 1586 aa16.22■□□□□ 0.19
RFC2-211ENST00000494019 ATP1B4Q9UN42 357 aaPredicted RBP16.22■□□□□ 0.19
RFC2-211ENST00000494019 MAP3K4Q9Y6R4 1608 aa16.22■□□□□ 0.19
RFC2-211ENST00000494019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
RFC2-211ENST00000494019 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
RFC2-211ENST00000494019 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
RFC2-211ENST00000494019 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
RFC2-211ENST00000494019 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
RFC2-211ENST00000494019 FAM69CQ0P6D2 419 aa16.19■□□□□ 0.18
RFC2-211ENST00000494019 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
RFC2-211ENST00000494019 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
RFC2-211ENST00000494019 KIF14Q15058 1648 aa16.13■□□□□ 0.17
RFC2-211ENST00000494019 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
RFC2-211ENST00000494019 TTC37Q6PGP7 1564 aa16.12■□□□□ 0.17
RFC2-211ENST00000494019 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
RFC2-211ENST00000494019 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
RFC2-211ENST00000494019 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
RFC2-211ENST00000494019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
RFC2-211ENST00000494019 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.16
RFC2-211ENST00000494019 TIAM1Q13009 1591 aa16.08■□□□□ 0.16
RFC2-211ENST00000494019 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
RFC2-211ENST00000494019 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
RFC2-211ENST00000494019 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
RFC2-211ENST00000494019 KDM6BO15054 1643 aa16.05■□□□□ 0.16
RFC2-211ENST00000494019 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
RFC2-211ENST00000494019 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
RFC2-211ENST00000494019 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
RFC2-211ENST00000494019 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
RFC2-211ENST00000494019 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
RFC2-211ENST00000494019 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
RFC2-211ENST00000494019 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
RFC2-211ENST00000494019 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
RFC2-211ENST00000494019 ITSN2Q9NZM3 1697 aa15.99■□□□□ 0.15
RFC2-211ENST00000494019 ARAP3Q8WWN8 1544 aa15.96■□□□□ 0.15
RFC2-211ENST00000494019 FANCAO15360 1455 aa15.96■□□□□ 0.14
RFC2-211ENST00000494019 ARHGAP5Q13017 1502 aa15.95■□□□□ 0.14
RFC2-211ENST00000494019 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
RFC2-211ENST00000494019 NEO1Q92859 1461 aa15.95■□□□□ 0.14
RFC2-211ENST00000494019 PLCH2O75038 1416 aa15.94■□□□□ 0.14
RFC2-211ENST00000494019 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms