RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 KIAA0586Q9BVV6 1533 aa38.49■■■■□ 3.75
SNIP1-203ENST00000493916 JPH4Q96JJ6 628 aa38.45■■■■□ 3.75
SNIP1-203ENST00000493916 PRG4Q92954 1404 aaPredicted RBP38.44■■■■□ 3.74
SNIP1-203ENST00000493916 RAPGEF2Q9Y4G8 1499 aa38.38■■■■□ 3.73
SNIP1-203ENST00000493916 IQGAP2Q13576 1575 aa38.25■■■■□ 3.71
SNIP1-203ENST00000493916 PRXQ9BXM0 1461 aa38.2■■■■□ 3.71
SNIP1-203ENST00000493916 EEA1Q15075 1411 aa38.12■■■■□ 3.69
SNIP1-203ENST00000493916 CARMIL2Q6F5E8 1435 aa38.07■■■■□ 3.69
SNIP1-203ENST00000493916 CTTNBP2Q8WZ74 1663 aa38.04■■■■□ 3.68
SNIP1-203ENST00000493916 UGGT2Q9NYU1 1516 aa38.04■■■■□ 3.68
SNIP1-203ENST00000493916 CSRNP3Q8WYN3 585 aa38.02■■■■□ 3.68
SNIP1-203ENST00000493916 TRHP20396 242 aaPredicted RBP38.01■■■■□ 3.68
SNIP1-203ENST00000493916 CHIC1Q5VXU3 224 aa38■■■■□ 3.67
SNIP1-203ENST00000493916 DISP1Q96F81 1524 aa37.99■■■■□ 3.67
SNIP1-203ENST00000493916 TNIKQ9UKE5 1360 aa37.96■■■■□ 3.67
SNIP1-203ENST00000493916 PTPRGP23470 1445 aa37.94■■■■□ 3.66
SNIP1-203ENST00000493916 ADCY10Q96PN6 1610 aa37.94■■■■□ 3.66
SNIP1-203ENST00000493916 KIAA0556O60303 1618 aa37.89■■■■□ 3.66
SNIP1-203ENST00000493916 GOLGA3Q08378 1498 aa37.79■■■■□ 3.64
SNIP1-203ENST00000493916 MAPKBP1O60336 1514 aa37.77■■■■□ 3.64
SNIP1-203ENST00000493916 NPM1P06748 294 aaKnown RBP eCLIP37.76■■■■□ 3.64
SNIP1-203ENST00000493916 FAM9AQ8IZU1 332 aaPredicted RBP37.75■■■■□ 3.63
SNIP1-203ENST00000493916 KIF21BO75037 1637 aa37.75■■■■□ 3.63
SNIP1-203ENST00000493916 UHRF1BP1LA0JNW5 1464 aa37.73■■■■□ 3.63
SNIP1-203ENST00000493916 TTBK1Q5TCY1 1321 aaPredicted RBP37.73■■■■□ 3.63
SNIP1-203ENST00000493916 UACAQ9BZF9 1416 aa37.7■■■■□ 3.63
SNIP1-203ENST00000493916 ABCC2Q92887 1545 aa37.68■■■■□ 3.62
SNIP1-203ENST00000493916 KIF13AQ9H1H9 1805 aa37.61■■■■□ 3.61
SNIP1-203ENST00000493916 ABCC10Q5T3U5 1492 aa37.6■■■■□ 3.61
SNIP1-203ENST00000493916 SAMD9Q5K651 1589 aa37.57■■■■□ 3.6
SNIP1-203ENST00000493916 DIP2BQ9P265 1576 aa37.55■■■■□ 3.6
SNIP1-203ENST00000493916 KDM5BQ9UGL1 1544 aa37.54■■■■□ 3.6
SNIP1-203ENST00000493916 PLB1Q6P1J6 1458 aa37.5■■■■□ 3.59
SNIP1-203ENST00000493916 ABCA8O94911 1581 aa37.5■■■■□ 3.59
SNIP1-203ENST00000493916 ZCCHC11Q5TAX3 1644 aaKnown RBP37.45■■■■□ 3.59
SNIP1-203ENST00000493916 ASXL2Q76L83 1435 aa37.44■■■■□ 3.58
SNIP1-203ENST00000493916 FAM69CQ0P6D2 419 aa37.44■■■■□ 3.58
SNIP1-203ENST00000493916 P3H3Q8IVL6 736 aa37.38■■■■□ 3.57
SNIP1-203ENST00000493916 EFCAB5A4FU69 1503 aa37.36■■■■□ 3.57
SNIP1-203ENST00000493916 GLI2P10070 1586 aa37.31■■■■□ 3.56
SNIP1-203ENST00000493916 UBTFP17480 764 aaKnown RBP37.29■■■■□ 3.56
SNIP1-203ENST00000493916 FHOD3Q2V2M9 1422 aa37.27■■■■□ 3.56
SNIP1-203ENST00000493916 RANGAP1P46060 587 aaPredicted RBP37.27■■■■□ 3.56
SNIP1-203ENST00000493916 EPRSP07814 1512 aaKnown RBP37.25■■■■□ 3.55
SNIP1-203ENST00000493916 EHMT2Q96KQ7 1210 aa37.24■■■■□ 3.55
SNIP1-203ENST00000493916 WDR7Q9Y4E6 1490 aa37.24■■■■□ 3.55
SNIP1-203ENST00000493916 RAPGEF6Q8TEU7 1601 aa37.24■■■■□ 3.55
SNIP1-203ENST00000493916 ATP10BO94823 1461 aa37.14■■■■□ 3.54
SNIP1-203ENST00000493916 TSPOAP1O95153 1857 aa37.13■■■■□ 3.54
SNIP1-203ENST00000493916 MAP3K4Q9Y6R4 1608 aa37.12■■■■□ 3.53
SNIP1-203ENST00000493916 NUP153P49790 1475 aaKnown RBP37.1■■■■□ 3.53
SNIP1-203ENST00000493916 PPRC1Q5VV67 1664 aaKnown RBP37.09■■■■□ 3.53
SNIP1-203ENST00000493916 ARHGAP35Q9NRY4 1499 aa37.08■■■■□ 3.53
SNIP1-203ENST00000493916 ARID3CA6NKF2 412 aa37.03■■■■□ 3.52
SNIP1-203ENST00000493916 KDM6BO15054 1643 aa36.99■■■■□ 3.51
SNIP1-203ENST00000493916 FMN1Q68DA7 1419 aa36.98■■■■□ 3.51
SNIP1-203ENST00000493916 CFAP43Q8NDM7 1665 aa36.96■■■■□ 3.51
SNIP1-203ENST00000493916 TEX14Q8IWB6 1497 aa36.95■■■■□ 3.51
SNIP1-203ENST00000493916 KCNH8Q96L42 1107 aa36.93■■■■□ 3.5
SNIP1-203ENST00000493916 CD109Q6YHK3 1445 aa36.88■■■■□ 3.49
SNIP1-203ENST00000493916 MAGI3Q5TCQ9 1506 aa36.88■■■■□ 3.49
SNIP1-203ENST00000493916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.87■■■■□ 3.49
SNIP1-203ENST00000493916 HNRNPUL2Q1KMD3 747 aaKnown RBP36.87■■■■□ 3.49
SNIP1-203ENST00000493916 HECW1Q76N89 1606 aa36.85■■■■□ 3.49
SNIP1-203ENST00000493916 ABCA9Q8IUA7 1624 aa36.84■■■■□ 3.49
SNIP1-203ENST00000493916 CDK13Q14004 1512 aaKnown RBP36.79■■■■□ 3.48
SNIP1-203ENST00000493916 CLIP1P30622 1438 aa36.76■■■■□ 3.48
SNIP1-203ENST00000493916 PLEKHD1A6NEE1 506 aa36.75■■■■□ 3.47
SNIP1-203ENST00000493916 COL17A1Q9UMD9 1497 aaPredicted RBP36.72■■■■□ 3.47
SNIP1-203ENST00000493916 CASKIN1Q8WXD9 1431 aa36.67■■■■□ 3.46
SNIP1-203ENST00000493916 PCF11O94913 1555 aaKnown RBP36.66■■■■□ 3.46
SNIP1-203ENST00000493916 ATP1B4Q9UN42 357 aaPredicted RBP36.65■■■■□ 3.46
SNIP1-203ENST00000493916 LRRIQ1Q96JM4 1722 aa36.62■■■■□ 3.45
SNIP1-203ENST00000493916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.61■■■■□ 3.45
SNIP1-203ENST00000493916 FYCO1Q9BQS8 1478 aa36.59■■■■□ 3.45
SNIP1-203ENST00000493916 PHLDB1Q86UU1 1377 aa36.58■■■■□ 3.45
SNIP1-203ENST00000493916 CCDC18Q5T9S5 1454 aa36.57■■■■□ 3.45
SNIP1-203ENST00000493916 ARAP3Q8WWN8 1544 aa36.57■■■■□ 3.44
SNIP1-203ENST00000493916 NEO1Q92859 1461 aa36.56■■■■□ 3.44
SNIP1-203ENST00000493916 CDK11AQ9UQ88 783 aaPredicted RBP36.56■■■■□ 3.44
SNIP1-203ENST00000493916 TTC37Q6PGP7 1564 aa36.56■■■■□ 3.44
SNIP1-203ENST00000493916 CEP162Q5TB80 1403 aa36.54■■■■□ 3.44
SNIP1-203ENST00000493916 TROQ12816 1431 aaPredicted RBP36.51■■■■□ 3.43
SNIP1-203ENST00000493916 KIF14Q15058 1648 aa36.46■■■■□ 3.43
SNIP1-203ENST00000493916 CFAP74Q9C0B2 1584 aa36.45■■■■□ 3.43
SNIP1-203ENST00000493916 FANCAO15360 1455 aa36.41■■■■□ 3.42
SNIP1-203ENST00000493916 LOC105371045A0A1W2PR82 267 aa36.39■■■■□ 3.42
SNIP1-203ENST00000493916 PLCH2O75038 1416 aa36.38■■■■□ 3.41
SNIP1-203ENST00000493916 MYO5CQ9NQX4 1742 aa36.35■■■■□ 3.41
SNIP1-203ENST00000493916 AKNAQ7Z591 1439 aa36.34■■■■□ 3.41
SNIP1-203ENST00000493916 FRMPD1Q5SYB0 1578 aa36.32■■■■□ 3.41
SNIP1-203ENST00000493916 AEBP2Q6ZN18 517 aaPredicted RBP36.28■■■■□ 3.4
SNIP1-203ENST00000493916 DENND4BO75064 1496 aaPredicted RBP36.27■■■■□ 3.4
SNIP1-203ENST00000493916 RAPGEF3O95398 923 aa36.27■■■■□ 3.4
SNIP1-203ENST00000493916 RICTORQ6R327 1708 aa36.24■■■■□ 3.39
SNIP1-203ENST00000493916 KDM4FA0A1W2PPD8 638 aa36.21■■■■□ 3.39
SNIP1-203ENST00000493916 ADGRL1O94910 1474 aa36.21■■■■□ 3.39
SNIP1-203ENST00000493916 EFCAB2Q5VUJ9 269 aa36.19■■■■□ 3.38
SNIP1-203ENST00000493916 ARHGAP5Q13017 1502 aa36.18■■■■□ 3.38
SNIP1-203ENST00000493916 PREX2Q70Z35 1606 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms