RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 PRG4Q92954 1404 aaPredicted RBP38■■■■□ 3.67
HLA-E-203ENST00000493699 RUSC2Q8N2Y8 1516 aa38■■■■□ 3.67
HLA-E-203ENST00000493699 CARMIL1Q5VZK9 1371 aa37.93■■■■□ 3.66
HLA-E-203ENST00000493699 KIAA0586Q9BVV6 1533 aa37.91■■■■□ 3.66
HLA-E-203ENST00000493699 RAPGEF2Q9Y4G8 1499 aa37.62■■■■□ 3.61
HLA-E-203ENST00000493699 IQGAP2Q13576 1575 aa37.55■■■■□ 3.6
HLA-E-203ENST00000493699 ADCY10Q96PN6 1610 aa37.49■■■■□ 3.59
HLA-E-203ENST00000493699 CARMIL2Q6F5E8 1435 aa37.48■■■■□ 3.59
HLA-E-203ENST00000493699 PTPRGP23470 1445 aa37.47■■■■□ 3.59
HLA-E-203ENST00000493699 NPM1P06748 294 aaKnown RBP eCLIP37.46■■■■□ 3.59
HLA-E-203ENST00000493699 TNIKQ9UKE5 1360 aa37.44■■■■□ 3.58
HLA-E-203ENST00000493699 DISP1Q96F81 1524 aa37.4■■■■□ 3.58
HLA-E-203ENST00000493699 MAPKBP1O60336 1514 aa37.38■■■■□ 3.57
HLA-E-203ENST00000493699 PRXQ9BXM0 1461 aa37.38■■■■□ 3.57
HLA-E-203ENST00000493699 UGGT2Q9NYU1 1516 aa37.37■■■■□ 3.57
HLA-E-203ENST00000493699 KIF13AQ9H1H9 1805 aa37.35■■■■□ 3.57
HLA-E-203ENST00000493699 TTBK1Q5TCY1 1321 aaPredicted RBP37.34■■■■□ 3.57
HLA-E-203ENST00000493699 ABCC10Q5T3U5 1492 aa37.32■■■■□ 3.56
HLA-E-203ENST00000493699 FAM69CQ0P6D2 419 aa37.26■■■■□ 3.56
HLA-E-203ENST00000493699 UHRF1BP1LA0JNW5 1464 aa37.21■■■■□ 3.55
HLA-E-203ENST00000493699 CTTNBP2Q8WZ74 1663 aa37.21■■■■□ 3.55
HLA-E-203ENST00000493699 KIAA0556O60303 1618 aa37.21■■■■□ 3.55
HLA-E-203ENST00000493699 ABCC2Q92887 1545 aa37.2■■■■□ 3.55
HLA-E-203ENST00000493699 CSRNP3Q8WYN3 585 aa37.2■■■■□ 3.55
HLA-E-203ENST00000493699 UACAQ9BZF9 1416 aa37.19■■■■□ 3.54
HLA-E-203ENST00000493699 DIP2BQ9P265 1576 aa37.19■■■■□ 3.54
HLA-E-203ENST00000493699 GOLGA3Q08378 1498 aa37.07■■■■□ 3.53
HLA-E-203ENST00000493699 EEA1Q15075 1411 aa37.06■■■■□ 3.52
HLA-E-203ENST00000493699 ASXL2Q76L83 1435 aa37.04■■■■□ 3.52
HLA-E-203ENST00000493699 KDM5BQ9UGL1 1544 aa37.04■■■■□ 3.52
HLA-E-203ENST00000493699 PLB1Q6P1J6 1458 aa37.01■■■■□ 3.52
HLA-E-203ENST00000493699 ZCCHC11Q5TAX3 1644 aaKnown RBP36.9■■■■□ 3.5
HLA-E-203ENST00000493699 GLI2P10070 1586 aa36.89■■■■□ 3.5
HLA-E-203ENST00000493699 CHIC1Q5VXU3 224 aa36.89■■■■□ 3.5
HLA-E-203ENST00000493699 FAM9AQ8IZU1 332 aaPredicted RBP36.89■■■■□ 3.5
HLA-E-203ENST00000493699 ABCA8O94911 1581 aa36.87■■■■□ 3.49
HLA-E-203ENST00000493699 TSPOAP1O95153 1857 aa36.86■■■■□ 3.49
HLA-E-203ENST00000493699 EPRSP07814 1512 aaKnown RBP36.82■■■■□ 3.48
HLA-E-203ENST00000493699 P3H3Q8IVL6 736 aa36.81■■■■□ 3.48
HLA-E-203ENST00000493699 SAMD9Q5K651 1589 aa36.77■■■■□ 3.48
HLA-E-203ENST00000493699 WDR7Q9Y4E6 1490 aa36.74■■■■□ 3.47
HLA-E-203ENST00000493699 KDM6BO15054 1643 aa36.73■■■■□ 3.47
HLA-E-203ENST00000493699 PPRC1Q5VV67 1664 aaKnown RBP36.73■■■■□ 3.47
HLA-E-203ENST00000493699 KIF21BO75037 1637 aa36.71■■■■□ 3.47
HLA-E-203ENST00000493699 MAP3K4Q9Y6R4 1608 aa36.67■■■■□ 3.46
HLA-E-203ENST00000493699 ATP10BO94823 1461 aa36.61■■■■□ 3.45
HLA-E-203ENST00000493699 RANGAP1P46060 587 aaPredicted RBP36.6■■■■□ 3.45
HLA-E-203ENST00000493699 AEBP2Q6ZN18 517 aaPredicted RBP36.59■■■■□ 3.45
HLA-E-203ENST00000493699 KCNH8Q96L42 1107 aa36.57■■■■□ 3.44
HLA-E-203ENST00000493699 FHOD3Q2V2M9 1422 aa36.54■■■■□ 3.44
HLA-E-203ENST00000493699 ARID3CA6NKF2 412 aa36.54■■■■□ 3.44
HLA-E-203ENST00000493699 TEX14Q8IWB6 1497 aa36.54■■■■□ 3.44
HLA-E-203ENST00000493699 COL17A1Q9UMD9 1497 aaPredicted RBP36.52■■■■□ 3.44
HLA-E-203ENST00000493699 RAPGEF6Q8TEU7 1601 aa36.52■■■■□ 3.44
HLA-E-203ENST00000493699 CD109Q6YHK3 1445 aa36.48■■■■□ 3.43
HLA-E-203ENST00000493699 EFCAB5A4FU69 1503 aa36.46■■■■□ 3.43
HLA-E-203ENST00000493699 CFAP43Q8NDM7 1665 aa36.45■■■■□ 3.43
HLA-E-203ENST00000493699 MAGI3Q5TCQ9 1506 aa36.45■■■■□ 3.43
HLA-E-203ENST00000493699 UBTFP17480 764 aaKnown RBP36.45■■■■□ 3.43
HLA-E-203ENST00000493699 NUP153P49790 1475 aaKnown RBP36.43■■■■□ 3.42
HLA-E-203ENST00000493699 EHMT2Q96KQ7 1210 aa36.43■■■■□ 3.42
HLA-E-203ENST00000493699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.34■■■■□ 3.41
HLA-E-203ENST00000493699 HNRNPUL2Q1KMD3 747 aaKnown RBP36.34■■■■□ 3.41
HLA-E-203ENST00000493699 KDM4FA0A1W2PPD8 638 aa36.3■■■■□ 3.4
HLA-E-203ENST00000493699 ABCA9Q8IUA7 1624 aa36.28■■■■□ 3.4
HLA-E-203ENST00000493699 ARHGAP35Q9NRY4 1499 aa36.25■■■■□ 3.39
HLA-E-203ENST00000493699 PLEKHD1A6NEE1 506 aa36.22■■■■□ 3.39
HLA-E-203ENST00000493699 ARAP3Q8WWN8 1544 aa36.16■■■■□ 3.38
HLA-E-203ENST00000493699 FMN1Q68DA7 1419 aa36.16■■■■□ 3.38
HLA-E-203ENST00000493699 PHLDB1Q86UU1 1377 aa36.14■■■■□ 3.38
HLA-E-203ENST00000493699 CDK13Q14004 1512 aaKnown RBP36.09■■■■□ 3.37
HLA-E-203ENST00000493699 NEO1Q92859 1461 aa36.07■■■■□ 3.37
HLA-E-203ENST00000493699 ATP1B4Q9UN42 357 aaPredicted RBP36.02■■■■□ 3.36
HLA-E-203ENST00000493699 ADGRL1O94910 1474 aa36.02■■■■□ 3.36
HLA-E-203ENST00000493699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.02■■■■□ 3.36
HLA-E-203ENST00000493699 HECW1Q76N89 1606 aa36.01■■■■□ 3.35
HLA-E-203ENST00000493699 RAPGEF3O95398 923 aa35.96■■■■□ 3.35
HLA-E-203ENST00000493699 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
HLA-E-203ENST00000493699 CDK11AQ9UQ88 783 aaPredicted RBP35.9■■■■□ 3.34
HLA-E-203ENST00000493699 FANCAO15360 1455 aa35.88■■■■□ 3.33
HLA-E-203ENST00000493699 AKNAQ7Z591 1439 aa35.88■■■■□ 3.33
HLA-E-203ENST00000493699 FRMPD1Q5SYB0 1578 aa35.85■■■■□ 3.33
HLA-E-203ENST00000493699 PLCH2O75038 1416 aa35.83■■■■□ 3.33
HLA-E-203ENST00000493699 CASKIN1Q8WXD9 1431 aa35.83■■■■□ 3.33
HLA-E-203ENST00000493699 LRRIQ1Q96JM4 1722 aa35.83■■■■□ 3.33
HLA-E-203ENST00000493699 CFAP74Q9C0B2 1584 aa35.81■■■■□ 3.32
HLA-E-203ENST00000493699 DENND4BO75064 1496 aaPredicted RBP35.8■■■■□ 3.32
HLA-E-203ENST00000493699 CLIP1P30622 1438 aa35.8■■■■□ 3.32
HLA-E-203ENST00000493699 TROQ12816 1431 aaPredicted RBP35.8■■■■□ 3.32
HLA-E-203ENST00000493699 PCF11O94913 1555 aaKnown RBP35.76■■■■□ 3.32
HLA-E-203ENST00000493699 RICTORQ6R327 1708 aa35.74■■■■□ 3.31
HLA-E-203ENST00000493699 KIF14Q15058 1648 aa35.74■■■■□ 3.31
HLA-E-203ENST00000493699 CCDC18Q5T9S5 1454 aa35.71■■■■□ 3.31
HLA-E-203ENST00000493699 EFCAB2Q5VUJ9 269 aa35.68■■■■□ 3.3
HLA-E-203ENST00000493699 FYCO1Q9BQS8 1478 aa35.67■■■■□ 3.3
HLA-E-203ENST00000493699 MYO5CQ9NQX4 1742 aa35.66■■■■□ 3.3
HLA-E-203ENST00000493699 SCAPERQ9BY12 1400 aa35.66■■■■□ 3.3
HLA-E-203ENST00000493699 ZMYM4Q5VZL5 1548 aa35.62■■■■□ 3.29
HLA-E-203ENST00000493699 ARHGEF40Q8TER5 1519 aa35.6■■■■□ 3.29
HLA-E-203ENST00000493699 POGZQ7Z3K3 1410 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms