RNA–Protein interactions for RNA: ENST00000493677.5

GPM6B-210, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-210ENST00000493677 BCANQ96GW7 911 aa13.9□□□□□ -0.18
GPM6B-210ENST00000493677 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
GPM6B-210ENST00000493677 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
GPM6B-210ENST00000493677 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
GPM6B-210ENST00000493677 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
GPM6B-210ENST00000493677 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
GPM6B-210ENST00000493677 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
GPM6B-210ENST00000493677 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
GPM6B-210ENST00000493677 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
GPM6B-210ENST00000493677 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
GPM6B-210ENST00000493677 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
GPM6B-210ENST00000493677 DSG3P32926 999 aa13.81□□□□□ -0.2
GPM6B-210ENST00000493677 MIER1Q8N108 512 aa13.8□□□□□ -0.2
GPM6B-210ENST00000493677 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
GPM6B-210ENST00000493677 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPM6B-210ENST00000493677 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
GPM6B-210ENST00000493677 RGL2O15211 777 aa13.73□□□□□ -0.21
GPM6B-210ENST00000493677 PLEKHG5O94827 1062 aa13.71□□□□□ -0.22
GPM6B-210ENST00000493677 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
GPM6B-210ENST00000493677 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
GPM6B-210ENST00000493677 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
GPM6B-210ENST00000493677 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
GPM6B-210ENST00000493677 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
GPM6B-210ENST00000493677 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
GPM6B-210ENST00000493677 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
GPM6B-210ENST00000493677 NESP48681 1621 aa13.61□□□□□ -0.23
GPM6B-210ENST00000493677 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
GPM6B-210ENST00000493677 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
GPM6B-210ENST00000493677 CFTRP13569 1480 aa13.58□□□□□ -0.24
GPM6B-210ENST00000493677 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
GPM6B-210ENST00000493677 LAMC3Q9Y6N6 1575 aa13.51□□□□□ -0.25
GPM6B-210ENST00000493677 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
GPM6B-210ENST00000493677 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
GPM6B-210ENST00000493677 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
GPM6B-210ENST00000493677 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
GPM6B-210ENST00000493677 GSE1Q14687 1217 aa13.43□□□□□ -0.26
GPM6B-210ENST00000493677 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
GPM6B-210ENST00000493677 KIF21AQ7Z4S6 1674 aa13.43□□□□□ -0.26
GPM6B-210ENST00000493677 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
GPM6B-210ENST00000493677 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
GPM6B-210ENST00000493677 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
GPM6B-210ENST00000493677 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
GPM6B-210ENST00000493677 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
GPM6B-210ENST00000493677 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-210ENST00000493677 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
GPM6B-210ENST00000493677 CUX1P39880 1505 aa13.33□□□□□ -0.27
GPM6B-210ENST00000493677 NBR1Q14596 966 aa13.32□□□□□ -0.28
GPM6B-210ENST00000493677 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
GPM6B-210ENST00000493677 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
GPM6B-210ENST00000493677 NUBP1P53384 320 aa13.31□□□□□ -0.28
GPM6B-210ENST00000493677 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
GPM6B-210ENST00000493677 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
GPM6B-210ENST00000493677 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
GPM6B-210ENST00000493677 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
GPM6B-210ENST00000493677 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
GPM6B-210ENST00000493677 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.28
GPM6B-210ENST00000493677 ARHGEF11O15085 1522 aa13.27□□□□□ -0.28
GPM6B-210ENST00000493677 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
GPM6B-210ENST00000493677 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
GPM6B-210ENST00000493677 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
GPM6B-210ENST00000493677 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
GPM6B-210ENST00000493677 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
GPM6B-210ENST00000493677 WDR62O43379 1518 aa13.24□□□□□ -0.29
GPM6B-210ENST00000493677 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
GPM6B-210ENST00000493677 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.29
GPM6B-210ENST00000493677 STK25O00506 426 aa13.2□□□□□ -0.3
GPM6B-210ENST00000493677 CYB5RLQ6IPT4 315 aa13.2□□□□□ -0.3
GPM6B-210ENST00000493677 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
GPM6B-210ENST00000493677 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
GPM6B-210ENST00000493677 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
GPM6B-210ENST00000493677 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
GPM6B-210ENST00000493677 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
GPM6B-210ENST00000493677 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
GPM6B-210ENST00000493677 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
GPM6B-210ENST00000493677 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
GPM6B-210ENST00000493677 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
GPM6B-210ENST00000493677 SOGA1O94964 1423 aa13.15□□□□□ -0.3
GPM6B-210ENST00000493677 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
GPM6B-210ENST00000493677 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
GPM6B-210ENST00000493677 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-210ENST00000493677 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-210ENST00000493677 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-210ENST00000493677 RASEFQ8IZ41 740 aa13.08□□□□□ -0.31
GPM6B-210ENST00000493677 STK24Q9Y6E0 443 aa13.08□□□□□ -0.31
GPM6B-210ENST00000493677 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
GPM6B-210ENST00000493677 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
GPM6B-210ENST00000493677 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
GPM6B-210ENST00000493677 ARAP1Q96P48 1450 aa13.07□□□□□ -0.32
GPM6B-210ENST00000493677 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
GPM6B-210ENST00000493677 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
GPM6B-210ENST00000493677 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
GPM6B-210ENST00000493677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
GPM6B-210ENST00000493677 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
GPM6B-210ENST00000493677 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
GPM6B-210ENST00000493677 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
GPM6B-210ENST00000493677 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
GPM6B-210ENST00000493677 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
GPM6B-210ENST00000493677 PYGBP11216 843 aa13.03□□□□□ -0.32
GPM6B-210ENST00000493677 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
GPM6B-210ENST00000493677 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms