RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
PSMB4-205ENST00000493673 KIAA0586Q9BVV6 1533 aa26.49■■□□□ 1.83
PSMB4-205ENST00000493673 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
PSMB4-205ENST00000493673 PRG4Q92954 1404 aaPredicted RBP26.45■■□□□ 1.83
PSMB4-205ENST00000493673 EEA1Q15075 1411 aa26.44■■□□□ 1.82
PSMB4-205ENST00000493673 FAM9AQ8IZU1 332 aaPredicted RBP26.41■■□□□ 1.82
PSMB4-205ENST00000493673 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
PSMB4-205ENST00000493673 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
PSMB4-205ENST00000493673 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
PSMB4-205ENST00000493673 CARMIL2Q6F5E8 1435 aa26.29■■□□□ 1.8
PSMB4-205ENST00000493673 IQGAP2Q13576 1575 aa26.26■■□□□ 1.79
PSMB4-205ENST00000493673 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
PSMB4-205ENST00000493673 PTPRGP23470 1445 aa26.19■■□□□ 1.78
PSMB4-205ENST00000493673 NPM1P06748 294 aaKnown RBP eCLIP26.19■■□□□ 1.78
PSMB4-205ENST00000493673 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
PSMB4-205ENST00000493673 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
PSMB4-205ENST00000493673 UGGT2Q9NYU1 1516 aa26.13■■□□□ 1.77
PSMB4-205ENST00000493673 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
PSMB4-205ENST00000493673 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
PSMB4-205ENST00000493673 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
PSMB4-205ENST00000493673 EHMT2Q96KQ7 1210 aa26.06■■□□□ 1.76
PSMB4-205ENST00000493673 CTTNBP2Q8WZ74 1663 aa26.05■■□□□ 1.76
PSMB4-205ENST00000493673 KIF21BO75037 1637 aa26.01■■□□□ 1.75
PSMB4-205ENST00000493673 RANGAP1P46060 587 aaPredicted RBP26.01■■□□□ 1.75
PSMB4-205ENST00000493673 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
PSMB4-205ENST00000493673 KIAA0556O60303 1618 aa25.97■■□□□ 1.75
PSMB4-205ENST00000493673 UACAQ9BZF9 1416 aa25.96■■□□□ 1.75
PSMB4-205ENST00000493673 ADCY10Q96PN6 1610 aa25.9■■□□□ 1.74
PSMB4-205ENST00000493673 UHRF1BP1LA0JNW5 1464 aa25.89■■□□□ 1.74
PSMB4-205ENST00000493673 ABCC2Q92887 1545 aa25.86■■□□□ 1.73
PSMB4-205ENST00000493673 FAM69CQ0P6D2 419 aa25.83■■□□□ 1.73
PSMB4-205ENST00000493673 PLB1Q6P1J6 1458 aa25.79■■□□□ 1.72
PSMB4-205ENST00000493673 MAPKBP1O60336 1514 aa25.79■■□□□ 1.72
PSMB4-205ENST00000493673 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
PSMB4-205ENST00000493673 KDM5BQ9UGL1 1544 aa25.75■■□□□ 1.71
PSMB4-205ENST00000493673 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
PSMB4-205ENST00000493673 EFCAB5A4FU69 1503 aa25.74■■□□□ 1.71
PSMB4-205ENST00000493673 FHOD3Q2V2M9 1422 aa25.73■■□□□ 1.71
PSMB4-205ENST00000493673 ASXL2Q76L83 1435 aa25.72■■□□□ 1.71
PSMB4-205ENST00000493673 ABCA8O94911 1581 aa25.71■■□□□ 1.71
PSMB4-205ENST00000493673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
PSMB4-205ENST00000493673 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
PSMB4-205ENST00000493673 ARID3CA6NKF2 412 aa25.68■■□□□ 1.7
PSMB4-205ENST00000493673 KCNH8Q96L42 1107 aa25.61■■□□□ 1.69
PSMB4-205ENST00000493673 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
PSMB4-205ENST00000493673 ZCCHC11Q5TAX3 1644 aaKnown RBP25.61■■□□□ 1.69
PSMB4-205ENST00000493673 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
PSMB4-205ENST00000493673 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
PSMB4-205ENST00000493673 ATP10BO94823 1461 aa25.6■■□□□ 1.69
PSMB4-205ENST00000493673 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
PSMB4-205ENST00000493673 RAPGEF6Q8TEU7 1601 aa25.57■■□□□ 1.68
PSMB4-205ENST00000493673 WDR7Q9Y4E6 1490 aa25.56■■□□□ 1.68
PSMB4-205ENST00000493673 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
PSMB4-205ENST00000493673 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
PSMB4-205ENST00000493673 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
PSMB4-205ENST00000493673 CLIP1P30622 1438 aa25.53■■□□□ 1.68
PSMB4-205ENST00000493673 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
PSMB4-205ENST00000493673 NUP153P49790 1475 aaKnown RBP25.51■■□□□ 1.67
PSMB4-205ENST00000493673 GLI2P10070 1586 aa25.5■■□□□ 1.67
PSMB4-205ENST00000493673 CDK11AQ9UQ88 783 aaPredicted RBP25.47■■□□□ 1.67
PSMB4-205ENST00000493673 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
PSMB4-205ENST00000493673 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
PSMB4-205ENST00000493673 TEX14Q8IWB6 1497 aa25.37■■□□□ 1.65
PSMB4-205ENST00000493673 TSPOAP1O95153 1857 aa25.36■■□□□ 1.65
PSMB4-205ENST00000493673 CASKIN1Q8WXD9 1431 aa25.36■■□□□ 1.65
PSMB4-205ENST00000493673 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
PSMB4-205ENST00000493673 MAP3K4Q9Y6R4 1608 aa25.31■■□□□ 1.64
PSMB4-205ENST00000493673 CDK13Q14004 1512 aaKnown RBP25.31■■□□□ 1.64
PSMB4-205ENST00000493673 MAGI3Q5TCQ9 1506 aa25.28■■□□□ 1.64
PSMB4-205ENST00000493673 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
PSMB4-205ENST00000493673 FYCO1Q9BQS8 1478 aa25.25■■□□□ 1.63
PSMB4-205ENST00000493673 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
PSMB4-205ENST00000493673 KDM6BO15054 1643 aa25.23■■□□□ 1.63
PSMB4-205ENST00000493673 PHLDB1Q86UU1 1377 aa25.22■■□□□ 1.63
PSMB4-205ENST00000493673 ABCA9Q8IUA7 1624 aa25.21■■□□□ 1.63
PSMB4-205ENST00000493673 PPRC1Q5VV67 1664 aaKnown RBP25.2■■□□□ 1.63
PSMB4-205ENST00000493673 PCF11O94913 1555 aaKnown RBP25.2■■□□□ 1.63
PSMB4-205ENST00000493673 TROQ12816 1431 aaPredicted RBP25.19■■□□□ 1.62
PSMB4-205ENST00000493673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.13■■□□□ 1.612e-13■■■□□ 17.2
PSMB4-205ENST00000493673 COL17A1Q9UMD9 1497 aaPredicted RBP25.12■■□□□ 1.61
PSMB4-205ENST00000493673 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
PSMB4-205ENST00000493673 NEO1Q92859 1461 aa25.12■■□□□ 1.61
PSMB4-205ENST00000493673 PLCH2O75038 1416 aa25.09■■□□□ 1.61
PSMB4-205ENST00000493673 MTUS2Q5JR59 1369 aa25.08■■□□□ 1.61
PSMB4-205ENST00000493673 VPS8Q8N3P4 1428 aa25.08■■□□□ 1.6
PSMB4-205ENST00000493673 ARAP3Q8WWN8 1544 aa25.07■■□□□ 1.6
PSMB4-205ENST00000493673 FANCAO15360 1455 aa25.06■■□□□ 1.6
PSMB4-205ENST00000493673 KIF14Q15058 1648 aa25.06■■□□□ 1.6
PSMB4-205ENST00000493673 AKNAQ7Z591 1439 aa25.05■■□□□ 1.6
PSMB4-205ENST00000493673 LRRIQ1Q96JM4 1722 aa25.05■■□□□ 1.6
PSMB4-205ENST00000493673 RAPGEF3O95398 923 aa25.04■■□□□ 1.6
PSMB4-205ENST00000493673 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
PSMB4-205ENST00000493673 APLP2Q06481 763 aa25.03■■□□□ 1.6
PSMB4-205ENST00000493673 DENND4BO75064 1496 aaPredicted RBP24.98■■□□□ 1.59
PSMB4-205ENST00000493673 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
PSMB4-205ENST00000493673 CCNB3Q8WWL7 1395 aa24.94■■□□□ 1.58
PSMB4-205ENST00000493673 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
PSMB4-205ENST00000493673 SCAPERQ9BY12 1400 aa24.94■■□□□ 1.58
PSMB4-205ENST00000493673 CFDP1Q9UEE9 299 aaPredicted RBP24.93■■□□□ 1.58
PSMB4-205ENST00000493673 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms