RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 IGF1RP08069 1367 aa25.45■■□□□ 1.67
ATG4B-223ENST00000493618 JPH4Q96JJ6 628 aa25.42■■□□□ 1.66
ATG4B-223ENST00000493618 KIAA0586Q9BVV6 1533 aa25.31■■□□□ 1.64
ATG4B-223ENST00000493618 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
ATG4B-223ENST00000493618 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
ATG4B-223ENST00000493618 ADCY10Q96PN6 1610 aa25.21■■□□□ 1.63
ATG4B-223ENST00000493618 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
ATG4B-223ENST00000493618 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
ATG4B-223ENST00000493618 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
ATG4B-223ENST00000493618 NPM1P06748 294 aaKnown RBP eCLIP25.09■■□□□ 1.61
ATG4B-223ENST00000493618 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
ATG4B-223ENST00000493618 PTPRGP23470 1445 aa25.05■■□□□ 1.6
ATG4B-223ENST00000493618 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
ATG4B-223ENST00000493618 CTTNBP2Q8WZ74 1663 aa25.04■■□□□ 1.6
ATG4B-223ENST00000493618 DIP2BQ9P265 1576 aa25.02■■□□□ 1.6
ATG4B-223ENST00000493618 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
ATG4B-223ENST00000493618 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
ATG4B-223ENST00000493618 ABCC10Q5T3U5 1492 aa25.01■■□□□ 1.59
ATG4B-223ENST00000493618 DISP1Q96F81 1524 aa25.01■■□□□ 1.59
ATG4B-223ENST00000493618 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
ATG4B-223ENST00000493618 TSPOAP1O95153 1857 aa24.98■■□□□ 1.59
ATG4B-223ENST00000493618 UGGT2Q9NYU1 1516 aa24.97■■□□□ 1.59
ATG4B-223ENST00000493618 KIAA0556O60303 1618 aa24.95■■□□□ 1.58
ATG4B-223ENST00000493618 ABCC2Q92887 1545 aa24.91■■□□□ 1.58
ATG4B-223ENST00000493618 UACAQ9BZF9 1416 aa24.87■■□□□ 1.57
ATG4B-223ENST00000493618 PRXQ9BXM0 1461 aa24.87■■□□□ 1.57
ATG4B-223ENST00000493618 UHRF1BP1LA0JNW5 1464 aa24.86■■□□□ 1.57
ATG4B-223ENST00000493618 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.57
ATG4B-223ENST00000493618 ASXL2Q76L83 1435 aa24.82■■□□□ 1.56
ATG4B-223ENST00000493618 KDM6BO15054 1643 aa24.78■■□□□ 1.56
ATG4B-223ENST00000493618 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
ATG4B-223ENST00000493618 PLB1Q6P1J6 1458 aa24.77■■□□□ 1.56
ATG4B-223ENST00000493618 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
ATG4B-223ENST00000493618 PPRC1Q5VV67 1664 aaKnown RBP24.75■■□□□ 1.55
ATG4B-223ENST00000493618 GLI2P10070 1586 aa24.73■■□□□ 1.55
ATG4B-223ENST00000493618 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
ATG4B-223ENST00000493618 ABCA8O94911 1581 aa24.69■■□□□ 1.54
ATG4B-223ENST00000493618 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
ATG4B-223ENST00000493618 MAP3K4Q9Y6R4 1608 aa24.67■■□□□ 1.54
ATG4B-223ENST00000493618 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
ATG4B-223ENST00000493618 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
ATG4B-223ENST00000493618 EEA1Q15075 1411 aa24.61■■□□□ 1.53
ATG4B-223ENST00000493618 SAMD9Q5K651 1589 aa24.6■■□□□ 1.53
ATG4B-223ENST00000493618 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
ATG4B-223ENST00000493618 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
ATG4B-223ENST00000493618 ARID3CA6NKF2 412 aa24.55■■□□□ 1.52
ATG4B-223ENST00000493618 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
ATG4B-223ENST00000493618 KIF21BO75037 1637 aa24.51■■□□□ 1.51
ATG4B-223ENST00000493618 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
ATG4B-223ENST00000493618 TEX14Q8IWB6 1497 aa24.5■■□□□ 1.51
ATG4B-223ENST00000493618 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
ATG4B-223ENST00000493618 COL17A1Q9UMD9 1497 aaPredicted RBP24.48■■□□□ 1.51
ATG4B-223ENST00000493618 ATP10BO94823 1461 aa24.46■■□□□ 1.51
ATG4B-223ENST00000493618 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
ATG4B-223ENST00000493618 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
ATG4B-223ENST00000493618 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
ATG4B-223ENST00000493618 CD109Q6YHK3 1445 aa24.43■■□□□ 1.5
ATG4B-223ENST00000493618 KDM4FA0A1W2PPD8 638 aa24.39■■□□□ 1.49
ATG4B-223ENST00000493618 MAGI3Q5TCQ9 1506 aa24.38■■□□□ 1.49
ATG4B-223ENST00000493618 NUP153P49790 1475 aaKnown RBP24.35■■□□□ 1.49
ATG4B-223ENST00000493618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.35■■□□□ 1.49
ATG4B-223ENST00000493618 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
ATG4B-223ENST00000493618 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
ATG4B-223ENST00000493618 ABCA9Q8IUA7 1624 aa24.33■■□□□ 1.49
ATG4B-223ENST00000493618 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
ATG4B-223ENST00000493618 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
ATG4B-223ENST00000493618 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
ATG4B-223ENST00000493618 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.46
ATG4B-223ENST00000493618 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
ATG4B-223ENST00000493618 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
ATG4B-223ENST00000493618 TTC37Q6PGP7 1564 aa24.13■■□□□ 1.45
ATG4B-223ENST00000493618 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
ATG4B-223ENST00000493618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.13■■□□□ 1.45
ATG4B-223ENST00000493618 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
ATG4B-223ENST00000493618 NEO1Q92859 1461 aa24.12■■□□□ 1.45
ATG4B-223ENST00000493618 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
ATG4B-223ENST00000493618 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
ATG4B-223ENST00000493618 FMN1Q68DA7 1419 aa24.1■■□□□ 1.45
ATG4B-223ENST00000493618 RAPGEF3O95398 923 aa24.09■■□□□ 1.45
ATG4B-223ENST00000493618 PHLDB1Q86UU1 1377 aa24.08■■□□□ 1.45
ATG4B-223ENST00000493618 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
ATG4B-223ENST00000493618 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
ATG4B-223ENST00000493618 FANCAO15360 1455 aa24.02■■□□□ 1.44
ATG4B-223ENST00000493618 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
ATG4B-223ENST00000493618 KIF14Q15058 1648 aa24■■□□□ 1.43
ATG4B-223ENST00000493618 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
ATG4B-223ENST00000493618 DENND4BO75064 1496 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-223ENST00000493618 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
ATG4B-223ENST00000493618 ARHGEF40Q8TER5 1519 aa23.93■■□□□ 1.42
ATG4B-223ENST00000493618 ADAMTSL3P82987 1691 aa23.92■■□□□ 1.42
ATG4B-223ENST00000493618 HECW2Q9P2P5 1572 aa23.92■■□□□ 1.42
ATG4B-223ENST00000493618 BCORL1Q5H9F3 1711 aa23.92■■□□□ 1.42
ATG4B-223ENST00000493618 CDK11AQ9UQ88 783 aaPredicted RBP23.91■■□□□ 1.42
ATG4B-223ENST00000493618 PLCH2O75038 1416 aa23.91■■□□□ 1.42
ATG4B-223ENST00000493618 TROQ12816 1431 aaPredicted RBP23.89■■□□□ 1.41
ATG4B-223ENST00000493618 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
ATG4B-223ENST00000493618 ARID4BQ4LE39 1312 aaPredicted RBP23.87■■□□□ 1.41
ATG4B-223ENST00000493618 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
ATG4B-223ENST00000493618 ZMYM4Q5VZL5 1548 aa23.87■■□□□ 1.41
ATG4B-223ENST00000493618 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms