RNA–Protein interactions for RNA: ENST00000493556.1

TRMU-217, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 3

Gene TRMU, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-217ENST00000493556 KIF13AQ9H1H9 1805 aa7.37□□□□□ -1.23
TRMU-217ENST00000493556 RNF216Q9NWF9 866 aaPredicted RBP7.36□□□□□ -1.23
TRMU-217ENST00000493556 ADGRL1O94910 1474 aa7.36□□□□□ -1.23
TRMU-217ENST00000493556 KDM6BO15054 1643 aa7.35□□□□□ -1.23
TRMU-217ENST00000493556 NPM1P06748 294 aaKnown RBP eCLIP7.35□□□□□ -1.23
TRMU-217ENST00000493556 ABCC8Q09428 1581 aa7.34□□□□□ -1.23
TRMU-217ENST00000493556 TOPBP1Q92547 1522 aa7.34□□□□□ -1.23
TRMU-217ENST00000493556 CENPBP07199 599 aaPredicted RBP7.34□□□□□ -1.23
TRMU-217ENST00000493556 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
TRMU-217ENST00000493556 TDRD9Q8NDG6 1382 aaKnown RBP7.32□□□□□ -1.24
TRMU-217ENST00000493556 SNAPC4Q5SXM2 1469 aa7.31□□□□□ -1.24
TRMU-217ENST00000493556 ABCC10Q5T3U5 1492 aa7.3□□□□□ -1.24
TRMU-217ENST00000493556 TARBP1Q13395 1621 aaKnown RBP7.29□□□□□ -1.24
TRMU-217ENST00000493556 CACNB1Q02641 598 aaPredicted RBP7.28□□□□□ -1.24
TRMU-217ENST00000493556 MAGI1Q96QZ7 1491 aaPredicted RBP7.28□□□□□ -1.24
TRMU-217ENST00000493556 DIEXFQ68CQ4 756 aaKnown RBP7.27□□□□□ -1.25
TRMU-217ENST00000493556 GTF3C3Q9Y5Q9 886 aa7.27□□□□□ -1.25
TRMU-217ENST00000493556 WRNQ14191 1432 aaPredicted RBP eCLIP7.27□□□□□ -1.25
TRMU-217ENST00000493556 WIZO95785 1651 aa7.26□□□□□ -1.25
TRMU-217ENST00000493556 DCAF8L1A6NGE4 600 aa7.26□□□□□ -1.25
TRMU-217ENST00000493556 NCBP3Q53F19 620 aaKnown RBP7.26□□□□□ -1.25
TRMU-217ENST00000493556 SOGA1O94964 1423 aa7.26□□□□□ -1.25
TRMU-217ENST00000493556 FAM9AQ8IZU1 332 aaPredicted RBP7.25□□□□□ -1.25
TRMU-217ENST00000493556 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
TRMU-217ENST00000493556 CERKQ8TCT0 537 aa7.25□□□□□ -1.25
TRMU-217ENST00000493556 TSPOAP1O95153 1857 aa7.25□□□□□ -1.25
TRMU-217ENST00000493556 DNMBPQ6XZF7 1577 aa7.25□□□□□ -1.25
TRMU-217ENST00000493556 RNF39Q9H2S5 420 aa7.24□□□□□ -1.25
TRMU-217ENST00000493556 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
TRMU-217ENST00000493556 PRDM2Q13029 1718 aa7.23□□□□□ -1.25
TRMU-217ENST00000493556 POLA1P09884 1462 aaPredicted RBP7.23□□□□□ -1.25
TRMU-217ENST00000493556 GRIN2BQ13224 1484 aa7.23□□□□□ -1.25
TRMU-217ENST00000493556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.22□□□□□ -1.25
TRMU-217ENST00000493556 DIP2BQ9P265 1576 aa7.21□□□□□ -1.25
TRMU-217ENST00000493556 SPATA31D1Q6ZQQ2 1576 aa7.2□□□□□ -1.26
TRMU-217ENST00000493556 C1QBPQ07021 282 aaKnown RBP7.2□□□□□ -1.26
TRMU-217ENST00000493556 MAPKBP1O60336 1514 aa7.19□□□□□ -1.26
TRMU-217ENST00000493556 ZNF316A6NFI3 1004 aaPredicted RBP7.19□□□□□ -1.26
TRMU-217ENST00000493556 CEP170Q5SW79 1584 aa7.19□□□□□ -1.26
TRMU-217ENST00000493556 WDR97A6NE52 1622 aa7.19□□□□□ -1.26
TRMU-217ENST00000493556 TOP2BQ02880 1626 aa7.19□□□□□ -1.26
TRMU-217ENST00000493556 TNIKQ9UKE5 1360 aa7.16□□□□□ -1.26
TRMU-217ENST00000493556 EEA1Q15075 1411 aa7.15□□□□□ -1.27
TRMU-217ENST00000493556 PRG4Q92954 1404 aaPredicted RBP7.14□□□□□ -1.27
TRMU-217ENST00000493556 JPH4Q96JJ6 628 aa7.14□□□□□ -1.27
TRMU-217ENST00000493556 CLSPNQ9HAW4 1339 aa7.14□□□□□ -1.27
TRMU-217ENST00000493556 CEP162Q5TB80 1403 aa7.13□□□□□ -1.27
TRMU-217ENST00000493556 TOP2AP11388 1531 aaKnown RBP7.12□□□□□ -1.27
TRMU-217ENST00000493556 GRIN2AQ12879 1464 aa7.11□□□□□ -1.27
TRMU-217ENST00000493556 SHROOM2Q13796 1616 aa7.1□□□□□ -1.27
TRMU-217ENST00000493556 EHMT2Q96KQ7 1210 aa7.1□□□□□ -1.27
TRMU-217ENST00000493556 COL17A1Q9UMD9 1497 aaPredicted RBP7.1□□□□□ -1.27
TRMU-217ENST00000493556 NUP160Q12769 1436 aa7.1□□□□□ -1.27
TRMU-217ENST00000493556 CCDC88BA6NC98 1476 aa7.09□□□□□ -1.27
TRMU-217ENST00000493556 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.27
TRMU-217ENST00000493556 PBRM1Q86U86 1689 aa7.08□□□□□ -1.28
TRMU-217ENST00000493556 KIF21BO75037 1637 aa7.08□□□□□ -1.28
TRMU-217ENST00000493556 TTBK1Q5TCY1 1321 aaPredicted RBP7.07□□□□□ -1.28
TRMU-217ENST00000493556 GOLGA3Q08378 1498 aa7.07□□□□□ -1.28
TRMU-217ENST00000493556 HSPA2P54652 639 aa7.07□□□□□ -1.28
TRMU-217ENST00000493556 MIER1Q8N108 512 aa7.07□□□□□ -1.28
TRMU-217ENST00000493556 ADCY10Q96PN6 1610 aa7.07□□□□□ -1.28
TRMU-217ENST00000493556 PCF11O94913 1555 aaKnown RBP7.07□□□□□ -1.28
TRMU-217ENST00000493556 PTPRMP28827 1452 aa7.06□□□□□ -1.28
TRMU-217ENST00000493556 TEX14Q8IWB6 1497 aa7.05□□□□□ -1.28
TRMU-217ENST00000493556 PPRC1Q5VV67 1664 aaKnown RBP7.04□□□□□ -1.28
TRMU-217ENST00000493556 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
TRMU-217ENST00000493556 PLB1Q6P1J6 1458 aa7.04□□□□□ -1.28
TRMU-217ENST00000493556 CSRNP3Q8WYN3 585 aa7.03□□□□□ -1.28
TRMU-217ENST00000493556 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
TRMU-217ENST00000493556 GLI2P10070 1586 aa7.03□□□□□ -1.28
TRMU-217ENST00000493556 ASXL2Q76L83 1435 aa7.02□□□□□ -1.29
TRMU-217ENST00000493556 FHAD1B1AJZ9 1412 aa7.01□□□□□ -1.29
TRMU-217ENST00000493556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7□□□□□ -1.298e-13■■■■□ 21.9
TRMU-217ENST00000493556 RUSC2Q8N2Y8 1516 aa7□□□□□ -1.29
TRMU-217ENST00000493556 ARID4BQ4LE39 1312 aaPredicted RBP7□□□□□ -1.29
TRMU-217ENST00000493556 VPS8Q8N3P4 1428 aa6.99□□□□□ -1.29
TRMU-217ENST00000493556 ABCA5Q8WWZ7 1642 aa6.98□□□□□ -1.29
TRMU-217ENST00000493556 ABCA10Q8WWZ4 1543 aa6.97□□□□□ -1.29
TRMU-217ENST00000493556 UBTFP17480 764 aaKnown RBP6.97□□□□□ -1.29
TRMU-217ENST00000493556 PTPRGP23470 1445 aa6.97□□□□□ -1.29
TRMU-217ENST00000493556 ADAMTS12P58397 1594 aa6.97□□□□□ -1.29
TRMU-217ENST00000493556 SUPT16HQ9Y5B9 1047 aaKnown RBP6.97□□□□□ -1.29
TRMU-217ENST00000493556 CUX1P39880 1505 aa6.96□□□□□ -1.29
TRMU-217ENST00000493556 ANP32EQ9BTT0 268 aa6.96□□□□□ -1.3
TRMU-217ENST00000493556 ADAMTSL3P82987 1691 aa6.96□□□□□ -1.3
TRMU-217ENST00000493556 ABCC2Q92887 1545 aa6.96□□□□□ -1.3
TRMU-217ENST00000493556 CLIP1P30622 1438 aa6.95□□□□□ -1.3
TRMU-217ENST00000493556 MAP3K4Q9Y6R4 1608 aa6.95□□□□□ -1.3
TRMU-217ENST00000493556 EPRSP07814 1512 aaKnown RBP6.95□□□□□ -1.3
TRMU-217ENST00000493556 KIAA0586Q9BVV6 1533 aa6.95□□□□□ -1.3
TRMU-217ENST00000493556 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
TRMU-217ENST00000493556 UBAP1LF5GYI3 381 aa6.93□□□□□ -1.3
TRMU-217ENST00000493556 HNRNPUL2Q1KMD3 747 aaKnown RBP6.93□□□□□ -1.3
TRMU-217ENST00000493556 DHX57Q6P158 1386 aaKnown RBP6.93□□□□□ -1.3
TRMU-217ENST00000493556 YEATS2Q9ULM3 1422 aa6.93□□□□□ -1.3
TRMU-217ENST00000493556 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
TRMU-217ENST00000493556 APLP2Q06481 763 aa6.9□□□□□ -1.3
TRMU-217ENST00000493556 KCNH8Q96L42 1107 aa6.9□□□□□ -1.3
TRMU-217ENST00000493556 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms