RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
HERC4-211ENST00000492996 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
HERC4-211ENST00000492996 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
HERC4-211ENST00000492996 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
HERC4-211ENST00000492996 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.461e-10■□□□□ 10.5
HERC4-211ENST00000492996 ABCA8O94911 1581 aa12.13□□□□□ -0.47
HERC4-211ENST00000492996 KIAA0556O60303 1618 aa12.13□□□□□ -0.47
HERC4-211ENST00000492996 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
HERC4-211ENST00000492996 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
HERC4-211ENST00000492996 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
HERC4-211ENST00000492996 KIF21BO75037 1637 aa12.1□□□□□ -0.47
HERC4-211ENST00000492996 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
HERC4-211ENST00000492996 CFAP74Q9C0B2 1584 aa12.06□□□□□ -0.48
HERC4-211ENST00000492996 EEA1Q15075 1411 aa12.05□□□□□ -0.48
HERC4-211ENST00000492996 PRXQ9BXM0 1461 aa12.05□□□□□ -0.48
HERC4-211ENST00000492996 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
HERC4-211ENST00000492996 DISP1Q96F81 1524 aa12.04□□□□□ -0.48
HERC4-211ENST00000492996 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
HERC4-211ENST00000492996 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
HERC4-211ENST00000492996 ZCCHC11Q5TAX3 1644 aaKnown RBP12.03□□□□□ -0.48
HERC4-211ENST00000492996 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.48
HERC4-211ENST00000492996 EFCAB5A4FU69 1503 aa12.02□□□□□ -0.49
HERC4-211ENST00000492996 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
HERC4-211ENST00000492996 IGF1RP08069 1367 aa11.98□□□□□ -0.49
HERC4-211ENST00000492996 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
HERC4-211ENST00000492996 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
HERC4-211ENST00000492996 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
HERC4-211ENST00000492996 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
HERC4-211ENST00000492996 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.49
HERC4-211ENST00000492996 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
HERC4-211ENST00000492996 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
HERC4-211ENST00000492996 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
HERC4-211ENST00000492996 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
HERC4-211ENST00000492996 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
HERC4-211ENST00000492996 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
HERC4-211ENST00000492996 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
HERC4-211ENST00000492996 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
HERC4-211ENST00000492996 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
HERC4-211ENST00000492996 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
HERC4-211ENST00000492996 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
HERC4-211ENST00000492996 NEO1Q92859 1461 aa11.81□□□□□ -0.52
HERC4-211ENST00000492996 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
HERC4-211ENST00000492996 KDM6BO15054 1643 aa11.81□□□□□ -0.52
HERC4-211ENST00000492996 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
HERC4-211ENST00000492996 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
HERC4-211ENST00000492996 CHIC1Q5VXU3 224 aa11.77□□□□□ -0.53
HERC4-211ENST00000492996 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.53
HERC4-211ENST00000492996 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
HERC4-211ENST00000492996 KDM5CP41229 1560 aa11.75□□□□□ -0.53
HERC4-211ENST00000492996 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
HERC4-211ENST00000492996 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
HERC4-211ENST00000492996 LRRIQ1Q96JM4 1722 aa11.73□□□□□ -0.53
HERC4-211ENST00000492996 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
HERC4-211ENST00000492996 TTC37Q6PGP7 1564 aa11.7□□□□□ -0.54
HERC4-211ENST00000492996 AGLP35573 1532 aa11.69□□□□□ -0.54
HERC4-211ENST00000492996 ITSN2Q9NZM3 1697 aa11.68□□□□□ -0.54
HERC4-211ENST00000492996 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
HERC4-211ENST00000492996 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
HERC4-211ENST00000492996 MYO5CQ9NQX4 1742 aa11.67□□□□□ -0.54
HERC4-211ENST00000492996 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
HERC4-211ENST00000492996 MAP3K1Q13233 1512 aa11.66□□□□□ -0.54
HERC4-211ENST00000492996 FHOD3Q2V2M9 1422 aa11.65□□□□□ -0.54
HERC4-211ENST00000492996 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.55
HERC4-211ENST00000492996 ASXL2Q76L83 1435 aa11.64□□□□□ -0.55
HERC4-211ENST00000492996 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
HERC4-211ENST00000492996 KDM5AP29375 1690 aaKnown RBP11.63□□□□□ -0.55
HERC4-211ENST00000492996 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
HERC4-211ENST00000492996 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
HERC4-211ENST00000492996 PLXNC1O60486 1568 aa11.61□□□□□ -0.55
HERC4-211ENST00000492996 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
HERC4-211ENST00000492996 MAST1Q9Y2H9 1570 aa11.6□□□□□ -0.55
HERC4-211ENST00000492996 PTPRGP23470 1445 aa11.6□□□□□ -0.55
HERC4-211ENST00000492996 NUP153P49790 1475 aaKnown RBP11.58□□□□□ -0.56
HERC4-211ENST00000492996 CCDC18Q5T9S5 1454 aa11.58□□□□□ -0.56
HERC4-211ENST00000492996 INO80Q9ULG1 1556 aaPredicted RBP11.57□□□□□ -0.56
HERC4-211ENST00000492996 ATP10BO94823 1461 aa11.56□□□□□ -0.56
HERC4-211ENST00000492996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.565e-7■□□□□ 10.2
HERC4-211ENST00000492996 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
HERC4-211ENST00000492996 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
HERC4-211ENST00000492996 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
HERC4-211ENST00000492996 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
HERC4-211ENST00000492996 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
HERC4-211ENST00000492996 CDC42BPAQ5VT25 1732 aa11.53□□□□□ -0.56
HERC4-211ENST00000492996 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.57
HERC4-211ENST00000492996 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.57
HERC4-211ENST00000492996 KIF14Q15058 1648 aa11.51□□□□□ -0.57
HERC4-211ENST00000492996 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
HERC4-211ENST00000492996 ABCC1P33527 1531 aa11.5□□□□□ -0.57
HERC4-211ENST00000492996 RNF17Q9BXT8 1623 aaKnown RBP11.5□□□□□ -0.57
HERC4-211ENST00000492996 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
HERC4-211ENST00000492996 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
HERC4-211ENST00000492996 MLH3Q9UHC1 1453 aa11.48□□□□□ -0.57
HERC4-211ENST00000492996 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
HERC4-211ENST00000492996 KDM5DQ9BY66 1539 aa11.47□□□□□ -0.57
HERC4-211ENST00000492996 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
HERC4-211ENST00000492996 LMTK3Q96Q04 1460 aa11.45□□□□□ -0.58
HERC4-211ENST00000492996 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
HERC4-211ENST00000492996 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
HERC4-211ENST00000492996 COL17A1Q9UMD9 1497 aaPredicted RBP11.44□□□□□ -0.58
HERC4-211ENST00000492996 FMN1Q68DA7 1419 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms