RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 CUL7Q14999 1698 aa32.18■■■□□ 2.74
CHD1L-209ENST00000492728 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
CHD1L-209ENST00000492728 KIAA0586Q9BVV6 1533 aa32.07■■■□□ 2.72
CHD1L-209ENST00000492728 CARMIL1Q5VZK9 1371 aa32.03■■■□□ 2.72
CHD1L-209ENST00000492728 ADCY10Q96PN6 1610 aa31.89■■■□□ 2.7
CHD1L-209ENST00000492728 KIF13AQ9H1H9 1805 aa31.82■■■□□ 2.68
CHD1L-209ENST00000492728 IQGAP2Q13576 1575 aa31.81■■■□□ 2.68
CHD1L-209ENST00000492728 RAPGEF2Q9Y4G8 1499 aa31.77■■■□□ 2.68
CHD1L-209ENST00000492728 MAPKBP1O60336 1514 aa31.76■■■□□ 2.68
CHD1L-209ENST00000492728 PTPRGP23470 1445 aa31.7■■■□□ 2.67
CHD1L-209ENST00000492728 ABCC10Q5T3U5 1492 aa31.7■■■□□ 2.66
CHD1L-209ENST00000492728 DISP1Q96F81 1524 aa31.7■■■□□ 2.66
CHD1L-209ENST00000492728 DIP2BQ9P265 1576 aa31.68■■■□□ 2.66
CHD1L-209ENST00000492728 TNIKQ9UKE5 1360 aa31.68■■■□□ 2.66
CHD1L-209ENST00000492728 CARMIL2Q6F5E8 1435 aa31.67■■■□□ 2.66
CHD1L-209ENST00000492728 TTBK1Q5TCY1 1321 aaPredicted RBP31.65■■■□□ 2.66
CHD1L-209ENST00000492728 NPM1P06748 294 aaKnown RBP eCLIP31.64■■■□□ 2.66
CHD1L-209ENST00000492728 UGGT2Q9NYU1 1516 aa31.64■■■□□ 2.66
CHD1L-209ENST00000492728 FAM69CQ0P6D2 419 aa31.6■■■□□ 2.65
CHD1L-209ENST00000492728 ABCC2Q92887 1545 aa31.56■■■□□ 2.64
CHD1L-209ENST00000492728 PRXQ9BXM0 1461 aa31.56■■■□□ 2.64
CHD1L-209ENST00000492728 KIAA0556O60303 1618 aa31.56■■■□□ 2.64
CHD1L-209ENST00000492728 CTTNBP2Q8WZ74 1663 aa31.53■■■□□ 2.64
CHD1L-209ENST00000492728 UHRF1BP1LA0JNW5 1464 aa31.52■■■□□ 2.64
CHD1L-209ENST00000492728 UACAQ9BZF9 1416 aa31.49■■■□□ 2.63
CHD1L-209ENST00000492728 ASXL2Q76L83 1435 aa31.43■■■□□ 2.62
CHD1L-209ENST00000492728 KDM5BQ9UGL1 1544 aa31.39■■■□□ 2.62
CHD1L-209ENST00000492728 TSPOAP1O95153 1857 aa31.37■■■□□ 2.61
CHD1L-209ENST00000492728 PLB1Q6P1J6 1458 aa31.35■■■□□ 2.61
CHD1L-209ENST00000492728 ZCCHC11Q5TAX3 1644 aaKnown RBP31.35■■■□□ 2.61
CHD1L-209ENST00000492728 GLI2P10070 1586 aa31.31■■■□□ 2.6
CHD1L-209ENST00000492728 GOLGA3Q08378 1498 aa31.31■■■□□ 2.6
CHD1L-209ENST00000492728 PPRC1Q5VV67 1664 aaKnown RBP31.29■■■□□ 2.6
CHD1L-209ENST00000492728 KDM6BO15054 1643 aa31.29■■■□□ 2.6
CHD1L-209ENST00000492728 ABCA8O94911 1581 aa31.26■■■□□ 2.6
CHD1L-209ENST00000492728 EPRSP07814 1512 aaKnown RBP31.25■■■□□ 2.59
CHD1L-209ENST00000492728 CSRNP3Q8WYN3 585 aa31.25■■■□□ 2.59
CHD1L-209ENST00000492728 MAP3K4Q9Y6R4 1608 aa31.18■■■□□ 2.58
CHD1L-209ENST00000492728 AEBP2Q6ZN18 517 aaPredicted RBP31.18■■■□□ 2.58
CHD1L-209ENST00000492728 EEA1Q15075 1411 aa31.16■■■□□ 2.58
CHD1L-209ENST00000492728 WDR7Q9Y4E6 1490 aa31.15■■■□□ 2.58
CHD1L-209ENST00000492728 SAMD9Q5K651 1589 aa31.13■■■□□ 2.57
CHD1L-209ENST00000492728 P3H3Q8IVL6 736 aa31.1■■■□□ 2.57
CHD1L-209ENST00000492728 COL17A1Q9UMD9 1497 aaPredicted RBP31.07■■■□□ 2.56
CHD1L-209ENST00000492728 FAM9AQ8IZU1 332 aaPredicted RBP31.06■■■□□ 2.56
CHD1L-209ENST00000492728 KIF21BO75037 1637 aa30.98■■■□□ 2.55
CHD1L-209ENST00000492728 ATP10BO94823 1461 aa30.98■■■□□ 2.55
CHD1L-209ENST00000492728 TEX14Q8IWB6 1497 aa30.98■■■□□ 2.55
CHD1L-209ENST00000492728 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
CHD1L-209ENST00000492728 RAPGEF6Q8TEU7 1601 aa30.94■■■□□ 2.54
CHD1L-209ENST00000492728 FHOD3Q2V2M9 1422 aa30.93■■■□□ 2.54
CHD1L-209ENST00000492728 KCNH8Q96L42 1107 aa30.93■■■□□ 2.54
CHD1L-209ENST00000492728 CFAP43Q8NDM7 1665 aa30.93■■■□□ 2.54
CHD1L-209ENST00000492728 RANGAP1P46060 587 aaPredicted RBP30.92■■■□□ 2.54
CHD1L-209ENST00000492728 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
CHD1L-209ENST00000492728 CD109Q6YHK3 1445 aa30.9■■■□□ 2.54
CHD1L-209ENST00000492728 MAGI3Q5TCQ9 1506 aa30.9■■■□□ 2.54
CHD1L-209ENST00000492728 KDM4FA0A1W2PPD8 638 aa30.9■■■□□ 2.54
CHD1L-209ENST00000492728 NUP153P49790 1475 aaKnown RBP30.86■■■□□ 2.53
CHD1L-209ENST00000492728 EFCAB5A4FU69 1503 aa30.8■■■□□ 2.52
CHD1L-209ENST00000492728 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
CHD1L-209ENST00000492728 EHMT2Q96KQ7 1210 aa30.76■■■□□ 2.51
CHD1L-209ENST00000492728 ADGRL1O94910 1474 aa30.72■■■□□ 2.51
CHD1L-209ENST00000492728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.66■■■□□ 2.5
CHD1L-209ENST00000492728 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
CHD1L-209ENST00000492728 ARAP3Q8WWN8 1544 aa30.65■■■□□ 2.5
CHD1L-209ENST00000492728 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
CHD1L-209ENST00000492728 ARHGAP35Q9NRY4 1499 aa30.62■■■□□ 2.49
CHD1L-209ENST00000492728 CDK13Q14004 1512 aaKnown RBP30.6■■■□□ 2.49
CHD1L-209ENST00000492728 NEO1Q92859 1461 aa30.54■■■□□ 2.48
CHD1L-209ENST00000492728 FRMPD1Q5SYB0 1578 aa30.53■■■□□ 2.48
CHD1L-209ENST00000492728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.52■■■□□ 2.48
CHD1L-209ENST00000492728 TTC37Q6PGP7 1564 aa30.52■■■□□ 2.48
CHD1L-209ENST00000492728 PLEKHD1A6NEE1 506 aa30.51■■■□□ 2.47
CHD1L-209ENST00000492728 PHLDB1Q86UU1 1377 aa30.5■■■□□ 2.47
CHD1L-209ENST00000492728 FMN1Q68DA7 1419 aa30.48■■■□□ 2.47
CHD1L-209ENST00000492728 RAPGEF3O95398 923 aa30.48■■■□□ 2.47
CHD1L-209ENST00000492728 HECW1Q76N89 1606 aa30.47■■■□□ 2.47
CHD1L-209ENST00000492728 FANCAO15360 1455 aa30.39■■■□□ 2.46
CHD1L-209ENST00000492728 LRRIQ1Q96JM4 1722 aa30.38■■■□□ 2.45
CHD1L-209ENST00000492728 AKNAQ7Z591 1439 aa30.38■■■□□ 2.45
CHD1L-209ENST00000492728 RICTORQ6R327 1708 aa30.36■■■□□ 2.45
CHD1L-209ENST00000492728 ATP1B4Q9UN42 357 aaPredicted RBP30.35■■■□□ 2.45
CHD1L-209ENST00000492728 CFAP74Q9C0B2 1584 aa30.35■■■□□ 2.45
CHD1L-209ENST00000492728 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
CHD1L-209ENST00000492728 KIF14Q15058 1648 aa30.33■■■□□ 2.45
CHD1L-209ENST00000492728 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
CHD1L-209ENST00000492728 ARHGEF40Q8TER5 1519 aa30.31■■■□□ 2.44
CHD1L-209ENST00000492728 PLCH2O75038 1416 aa30.28■■■□□ 2.44
CHD1L-209ENST00000492728 TROQ12816 1431 aaPredicted RBP30.26■■■□□ 2.43
CHD1L-209ENST00000492728 ADAMTSL3P82987 1691 aa30.25■■■□□ 2.43
CHD1L-209ENST00000492728 ZMYM4Q5VZL5 1548 aa30.25■■■□□ 2.43
CHD1L-209ENST00000492728 HECW2Q9P2P5 1572 aa30.24■■■□□ 2.43
CHD1L-209ENST00000492728 CASKIN1Q8WXD9 1431 aa30.22■■■□□ 2.43
CHD1L-209ENST00000492728 MYO5CQ9NQX4 1742 aa30.22■■■□□ 2.43
CHD1L-209ENST00000492728 BCORL1Q5H9F3 1711 aa30.2■■■□□ 2.43
CHD1L-209ENST00000492728 POGZQ7Z3K3 1410 aa30.19■■■□□ 2.42
CHD1L-209ENST00000492728 YEATS2Q9ULM3 1422 aa30.19■■■□□ 2.42
CHD1L-209ENST00000492728 SIGLEC1Q9BZZ2 1709 aa30.19■■■□□ 2.42
CHD1L-209ENST00000492728 CDK11AQ9UQ88 783 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms