RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 KIAA0586Q9BVV6 1533 aa22.04■■□□□ 1.12
PTPRE-210ENST00000492479 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
PTPRE-210ENST00000492479 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
PTPRE-210ENST00000492479 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
PTPRE-210ENST00000492479 CLIP1P30622 1438 aa21.99■■□□□ 1.11
PTPRE-210ENST00000492479 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
PTPRE-210ENST00000492479 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
PTPRE-210ENST00000492479 SAMD9Q5K651 1589 aa21.95■■□□□ 1.1
PTPRE-210ENST00000492479 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
PTPRE-210ENST00000492479 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
PTPRE-210ENST00000492479 FBLN2P98095 1184 aa21.88■■□□□ 1.09
PTPRE-210ENST00000492479 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
PTPRE-210ENST00000492479 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
PTPRE-210ENST00000492479 DISP1Q96F81 1524 aa21.81■■□□□ 1.08
PTPRE-210ENST00000492479 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
PTPRE-210ENST00000492479 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
PTPRE-210ENST00000492479 JPH4Q96JJ6 628 aa21.75■■□□□ 1.07
PTPRE-210ENST00000492479 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
PTPRE-210ENST00000492479 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
PTPRE-210ENST00000492479 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
PTPRE-210ENST00000492479 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
PTPRE-210ENST00000492479 PRG4Q92954 1404 aaPredicted RBP21.67■■□□□ 1.06
PTPRE-210ENST00000492479 RANGAP1P46060 587 aaPredicted RBP21.66■■□□□ 1.06
PTPRE-210ENST00000492479 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
PTPRE-210ENST00000492479 CASKIN1Q8WXD9 1431 aa21.63■■□□□ 1.05
PTPRE-210ENST00000492479 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
PTPRE-210ENST00000492479 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
PTPRE-210ENST00000492479 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
PTPRE-210ENST00000492479 P3H3Q8IVL6 736 aa21.57■■□□□ 1.04
PTPRE-210ENST00000492479 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
PTPRE-210ENST00000492479 ABCA8O94911 1581 aa21.53■■□□□ 1.04
PTPRE-210ENST00000492479 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
PTPRE-210ENST00000492479 CFAP43Q8NDM7 1665 aa21.51■■□□□ 1.03
PTPRE-210ENST00000492479 PTPRGP23470 1445 aa21.5■■□□□ 1.03
PTPRE-210ENST00000492479 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
PTPRE-210ENST00000492479 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
PTPRE-210ENST00000492479 CCDC18Q5T9S5 1454 aa21.47■■□□□ 1.03
PTPRE-210ENST00000492479 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
PTPRE-210ENST00000492479 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
PTPRE-210ENST00000492479 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
PTPRE-210ENST00000492479 EPRSP07814 1512 aaKnown RBP21.43■■□□□ 1.02
PTPRE-210ENST00000492479 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
PTPRE-210ENST00000492479 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
PTPRE-210ENST00000492479 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
PTPRE-210ENST00000492479 APLP2Q06481 763 aa21.38■■□□□ 1.01
PTPRE-210ENST00000492479 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
PTPRE-210ENST00000492479 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
PTPRE-210ENST00000492479 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
PTPRE-210ENST00000492479 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
PTPRE-210ENST00000492479 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
PTPRE-210ENST00000492479 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
PTPRE-210ENST00000492479 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
PTPRE-210ENST00000492479 ATP10BO94823 1461 aa21.31■■□□□ 1
PTPRE-210ENST00000492479 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
PTPRE-210ENST00000492479 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
PTPRE-210ENST00000492479 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
PTPRE-210ENST00000492479 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
PTPRE-210ENST00000492479 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
PTPRE-210ENST00000492479 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
PTPRE-210ENST00000492479 TROQ12816 1431 aaPredicted RBP21.22■□□□□ 0.99
PTPRE-210ENST00000492479 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
PTPRE-210ENST00000492479 MTUS2Q5JR59 1369 aa21.22■□□□□ 0.99
PTPRE-210ENST00000492479 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
PTPRE-210ENST00000492479 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
PTPRE-210ENST00000492479 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
PTPRE-210ENST00000492479 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
PTPRE-210ENST00000492479 KIF14Q15058 1648 aa21.11■□□□□ 0.97
PTPRE-210ENST00000492479 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
PTPRE-210ENST00000492479 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
PTPRE-210ENST00000492479 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
PTPRE-210ENST00000492479 TRIM26Q12899 539 aaPredicted RBP21.09■□□□□ 0.97
PTPRE-210ENST00000492479 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
PTPRE-210ENST00000492479 MAPKBP1O60336 1514 aa21.08■□□□□ 0.96
PTPRE-210ENST00000492479 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
PTPRE-210ENST00000492479 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
PTPRE-210ENST00000492479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
PTPRE-210ENST00000492479 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
PTPRE-210ENST00000492479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPRE-210ENST00000492479 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
PTPRE-210ENST00000492479 ITSN2Q9NZM3 1697 aa21.03■□□□□ 0.96
PTPRE-210ENST00000492479 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
PTPRE-210ENST00000492479 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.96
PTPRE-210ENST00000492479 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
PTPRE-210ENST00000492479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21■□□□□ 0.95
PTPRE-210ENST00000492479 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
PTPRE-210ENST00000492479 TCOF1Q13428 1488 aaKnown RBP21■□□□□ 0.95
PTPRE-210ENST00000492479 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
PTPRE-210ENST00000492479 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
PTPRE-210ENST00000492479 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
PTPRE-210ENST00000492479 ABCA9Q8IUA7 1624 aa20.98■□□□□ 0.95
PTPRE-210ENST00000492479 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
PTPRE-210ENST00000492479 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
PTPRE-210ENST00000492479 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
PTPRE-210ENST00000492479 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
PTPRE-210ENST00000492479 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
PTPRE-210ENST00000492479 MYO5CQ9NQX4 1742 aa20.94■□□□□ 0.94
PTPRE-210ENST00000492479 GLI2P10070 1586 aa20.92■□□□□ 0.94
PTPRE-210ENST00000492479 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
PTPRE-210ENST00000492479 PLCH2O75038 1416 aa20.88■□□□□ 0.93
PTPRE-210ENST00000492479 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms