RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
ATF3-209ENST00000492118 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
ATF3-209ENST00000492118 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
ATF3-209ENST00000492118 CHD1O14646 1710 aa17.22■□□□□ 0.35
ATF3-209ENST00000492118 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
ATF3-209ENST00000492118 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
ATF3-209ENST00000492118 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
ATF3-209ENST00000492118 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
ATF3-209ENST00000492118 CLIP1P30622 1438 aa17.13■□□□□ 0.33
ATF3-209ENST00000492118 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
ATF3-209ENST00000492118 NUP160Q12769 1436 aa17.07■□□□□ 0.32
ATF3-209ENST00000492118 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
ATF3-209ENST00000492118 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
ATF3-209ENST00000492118 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
ATF3-209ENST00000492118 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
ATF3-209ENST00000492118 ARHGAP35Q9NRY4 1499 aa17.03■□□□□ 0.32
ATF3-209ENST00000492118 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.32
ATF3-209ENST00000492118 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.31
ATF3-209ENST00000492118 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
ATF3-209ENST00000492118 ARAP1Q96P48 1450 aa17■□□□□ 0.31
ATF3-209ENST00000492118 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
ATF3-209ENST00000492118 ARID3CA6NKF2 412 aa16.96■□□□□ 0.3
ATF3-209ENST00000492118 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
ATF3-209ENST00000492118 CLASP1Q7Z460 1538 aa16.93■□□□□ 0.3
ATF3-209ENST00000492118 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
ATF3-209ENST00000492118 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
ATF3-209ENST00000492118 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
ATF3-209ENST00000492118 KIAA0556O60303 1618 aa16.9■□□□□ 0.3
ATF3-209ENST00000492118 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
ATF3-209ENST00000492118 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.3
ATF3-209ENST00000492118 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
ATF3-209ENST00000492118 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
ATF3-209ENST00000492118 APLP2Q06481 763 aa16.82■□□□□ 0.28
ATF3-209ENST00000492118 PTPRGP23470 1445 aa16.81■□□□□ 0.28
ATF3-209ENST00000492118 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
ATF3-209ENST00000492118 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
ATF3-209ENST00000492118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
ATF3-209ENST00000492118 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
ATF3-209ENST00000492118 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
ATF3-209ENST00000492118 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
ATF3-209ENST00000492118 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
ATF3-209ENST00000492118 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
ATF3-209ENST00000492118 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
ATF3-209ENST00000492118 FYCO1Q9BQS8 1478 aa16.71■□□□□ 0.26
ATF3-209ENST00000492118 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
ATF3-209ENST00000492118 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
ATF3-209ENST00000492118 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
ATF3-209ENST00000492118 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
ATF3-209ENST00000492118 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
ATF3-209ENST00000492118 RIMBP3CA6NJZ7 1639 aa16.68■□□□□ 0.26
ATF3-209ENST00000492118 RIMBP3BA6NNM3 1639 aa16.68■□□□□ 0.26
ATF3-209ENST00000492118 RIMBP3Q9UFD9 1639 aa16.68■□□□□ 0.26
ATF3-209ENST00000492118 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
ATF3-209ENST00000492118 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
ATF3-209ENST00000492118 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
ATF3-209ENST00000492118 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
ATF3-209ENST00000492118 ABCA8O94911 1581 aa16.65■□□□□ 0.26
ATF3-209ENST00000492118 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
ATF3-209ENST00000492118 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
ATF3-209ENST00000492118 ATP10BO94823 1461 aa16.6■□□□□ 0.25
ATF3-209ENST00000492118 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
ATF3-209ENST00000492118 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
ATF3-209ENST00000492118 KCNH8Q96L42 1107 aa16.58■□□□□ 0.25
ATF3-209ENST00000492118 CCDC18Q5T9S5 1454 aa16.58■□□□□ 0.24
ATF3-209ENST00000492118 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
ATF3-209ENST00000492118 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
ATF3-209ENST00000492118 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
ATF3-209ENST00000492118 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
ATF3-209ENST00000492118 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
ATF3-209ENST00000492118 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
ATF3-209ENST00000492118 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
ATF3-209ENST00000492118 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.23
ATF3-209ENST00000492118 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
ATF3-209ENST00000492118 UHRF1BP1LA0JNW5 1464 aa16.5■□□□□ 0.23
ATF3-209ENST00000492118 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
ATF3-209ENST00000492118 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
ATF3-209ENST00000492118 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
ATF3-209ENST00000492118 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
ATF3-209ENST00000492118 KIF14Q15058 1648 aa16.46■□□□□ 0.23
ATF3-209ENST00000492118 NCOA2Q15596 1464 aa16.46■□□□□ 0.22
ATF3-209ENST00000492118 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
ATF3-209ENST00000492118 ITGAEP38570 1179 aa16.45■□□□□ 0.22
ATF3-209ENST00000492118 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
ATF3-209ENST00000492118 ASXL2Q76L83 1435 aa16.44■□□□□ 0.22
ATF3-209ENST00000492118 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
ATF3-209ENST00000492118 SUPT6HQ7KZ85 1726 aaKnown RBP16.43■□□□□ 0.22
ATF3-209ENST00000492118 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
ATF3-209ENST00000492118 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
ATF3-209ENST00000492118 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
ATF3-209ENST00000492118 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
ATF3-209ENST00000492118 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
ATF3-209ENST00000492118 TTC37Q6PGP7 1564 aa16.35■□□□□ 0.21
ATF3-209ENST00000492118 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
ATF3-209ENST00000492118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.33■□□□□ 0.21
ATF3-209ENST00000492118 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.21
ATF3-209ENST00000492118 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
ATF3-209ENST00000492118 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
ATF3-209ENST00000492118 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
ATF3-209ENST00000492118 ABCC10Q5T3U5 1492 aa16.31■□□□□ 0.2
ATF3-209ENST00000492118 CDC42BPAQ5VT25 1732 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms