RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
NELFCD-211ENST00000492016 CTTNBP2Q8WZ74 1663 aa25.78■■□□□ 1.72
NELFCD-211ENST00000492016 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
NELFCD-211ENST00000492016 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
NELFCD-211ENST00000492016 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
NELFCD-211ENST00000492016 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
NELFCD-211ENST00000492016 UGGT2Q9NYU1 1516 aa25.72■■□□□ 1.71
NELFCD-211ENST00000492016 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
NELFCD-211ENST00000492016 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
NELFCD-211ENST00000492016 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
NELFCD-211ENST00000492016 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.7
NELFCD-211ENST00000492016 ARHGEF11O15085 1522 aa25.62■■□□□ 1.69
NELFCD-211ENST00000492016 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
NELFCD-211ENST00000492016 DISP1Q96F81 1524 aa25.58■■□□□ 1.69
NELFCD-211ENST00000492016 EFCAB5A4FU69 1503 aa25.55■■□□□ 1.68
NELFCD-211ENST00000492016 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
NELFCD-211ENST00000492016 RIMBP3CA6NJZ7 1639 aa25.53■■□□□ 1.68
NELFCD-211ENST00000492016 RIMBP3BA6NNM3 1639 aa25.53■■□□□ 1.68
NELFCD-211ENST00000492016 KIAA0556O60303 1618 aa25.53■■□□□ 1.68
NELFCD-211ENST00000492016 RIMBP3Q9UFD9 1639 aa25.53■■□□□ 1.68
NELFCD-211ENST00000492016 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
NELFCD-211ENST00000492016 CLIP1P30622 1438 aa25.46■■□□□ 1.67
NELFCD-211ENST00000492016 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.66
NELFCD-211ENST00000492016 CEP162Q5TB80 1403 aa25.45■■□□□ 1.66
NELFCD-211ENST00000492016 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
NELFCD-211ENST00000492016 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
NELFCD-211ENST00000492016 PTPRGP23470 1445 aa25.44■■□□□ 1.66
NELFCD-211ENST00000492016 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
NELFCD-211ENST00000492016 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
NELFCD-211ENST00000492016 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
NELFCD-211ENST00000492016 FMN1Q68DA7 1419 aa25.33■■□□□ 1.65
NELFCD-211ENST00000492016 UACAQ9BZF9 1416 aa25.29■■□□□ 1.64
NELFCD-211ENST00000492016 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
NELFCD-211ENST00000492016 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
NELFCD-211ENST00000492016 ABCA8O94911 1581 aa25.25■■□□□ 1.63
NELFCD-211ENST00000492016 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
NELFCD-211ENST00000492016 ABCC2Q92887 1545 aa25.22■■□□□ 1.63
NELFCD-211ENST00000492016 RAPGEF6Q8TEU7 1601 aa25.18■■□□□ 1.62
NELFCD-211ENST00000492016 ADCY10Q96PN6 1610 aa25.17■■□□□ 1.62
NELFCD-211ENST00000492016 CASKIN1Q8WXD9 1431 aa25.16■■□□□ 1.62
NELFCD-211ENST00000492016 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.62
NELFCD-211ENST00000492016 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
NELFCD-211ENST00000492016 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
NELFCD-211ENST00000492016 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
NELFCD-211ENST00000492016 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
NELFCD-211ENST00000492016 HECW1Q76N89 1606 aa25.1■■□□□ 1.61
NELFCD-211ENST00000492016 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
NELFCD-211ENST00000492016 ATP10BO94823 1461 aa25.05■■□□□ 1.6
NELFCD-211ENST00000492016 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
NELFCD-211ENST00000492016 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
NELFCD-211ENST00000492016 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
NELFCD-211ENST00000492016 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
NELFCD-211ENST00000492016 ZCCHC11Q5TAX3 1644 aaKnown RBP25■■□□□ 1.59
NELFCD-211ENST00000492016 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
NELFCD-211ENST00000492016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
NELFCD-211ENST00000492016 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
NELFCD-211ENST00000492016 ASXL2Q76L83 1435 aa24.93■■□□□ 1.58
NELFCD-211ENST00000492016 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
NELFCD-211ENST00000492016 CDK13Q14004 1512 aaKnown RBP24.92■■□□□ 1.58
NELFCD-211ENST00000492016 ARID3CA6NKF2 412 aa24.92■■□□□ 1.58
NELFCD-211ENST00000492016 PLEKHD1A6NEE1 506 aa24.9■■□□□ 1.58
NELFCD-211ENST00000492016 WDR7Q9Y4E6 1490 aa24.89■■□□□ 1.58
NELFCD-211ENST00000492016 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
NELFCD-211ENST00000492016 APLP2Q06481 763 aa24.86■■□□□ 1.57
NELFCD-211ENST00000492016 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
NELFCD-211ENST00000492016 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
NELFCD-211ENST00000492016 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
NELFCD-211ENST00000492016 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
NELFCD-211ENST00000492016 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
NELFCD-211ENST00000492016 GLI2P10070 1586 aa24.76■■□□□ 1.55
NELFCD-211ENST00000492016 LRRC9Q6ZRR7 1453 aa24.75■■□□□ 1.55
NELFCD-211ENST00000492016 MAGI3Q5TCQ9 1506 aa24.75■■□□□ 1.55
NELFCD-211ENST00000492016 EHBP1L1Q8N3D4 1523 aa24.75■■□□□ 1.55
NELFCD-211ENST00000492016 DIP2BQ9P265 1576 aa24.74■■□□□ 1.55
NELFCD-211ENST00000492016 KCNH8Q96L42 1107 aa24.73■■□□□ 1.55
NELFCD-211ENST00000492016 FAM69CQ0P6D2 419 aa24.71■■□□□ 1.55
NELFCD-211ENST00000492016 KIF14Q15058 1648 aa24.7■■□□□ 1.54
NELFCD-211ENST00000492016 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
NELFCD-211ENST00000492016 ABCA9Q8IUA7 1624 aa24.67■■□□□ 1.54
NELFCD-211ENST00000492016 TRHP20396 242 aaPredicted RBP24.65■■□□□ 1.54
NELFCD-211ENST00000492016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.65■■□□□ 1.54
NELFCD-211ENST00000492016 KIF13AQ9H1H9 1805 aa24.62■■□□□ 1.53
NELFCD-211ENST00000492016 CD109Q6YHK3 1445 aa24.61■■□□□ 1.53
NELFCD-211ENST00000492016 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
NELFCD-211ENST00000492016 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
NELFCD-211ENST00000492016 NCOA2Q15596 1464 aa24.58■■□□□ 1.53
NELFCD-211ENST00000492016 TTC37Q6PGP7 1564 aa24.58■■□□□ 1.52
NELFCD-211ENST00000492016 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
NELFCD-211ENST00000492016 PLCH2O75038 1416 aa24.57■■□□□ 1.52
NELFCD-211ENST00000492016 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
NELFCD-211ENST00000492016 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
NELFCD-211ENST00000492016 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
NELFCD-211ENST00000492016 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
NELFCD-211ENST00000492016 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
NELFCD-211ENST00000492016 EFCAB2Q5VUJ9 269 aa24.48■■□□□ 1.51
NELFCD-211ENST00000492016 PREX2Q70Z35 1606 aa24.47■■□□□ 1.51
NELFCD-211ENST00000492016 NEO1Q92859 1461 aa24.47■■□□□ 1.51
NELFCD-211ENST00000492016 MYOM3Q5VTT5 1437 aa24.46■■□□□ 1.51
NELFCD-211ENST00000492016 MIA2Q96PC5 1412 aa24.45■■□□□ 1.51
NELFCD-211ENST00000492016 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms