RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 IGF1RP08069 1367 aa20.46■□□□□ 0.87
C3orf49-202ENST00000491896 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
C3orf49-202ENST00000491896 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
C3orf49-202ENST00000491896 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
C3orf49-202ENST00000491896 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
C3orf49-202ENST00000491896 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
C3orf49-202ENST00000491896 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
C3orf49-202ENST00000491896 EEA1Q15075 1411 aa20.33■□□□□ 0.84
C3orf49-202ENST00000491896 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
C3orf49-202ENST00000491896 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
C3orf49-202ENST00000491896 PRXQ9BXM0 1461 aa20.24■□□□□ 0.83
C3orf49-202ENST00000491896 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
C3orf49-202ENST00000491896 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
C3orf49-202ENST00000491896 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
C3orf49-202ENST00000491896 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
C3orf49-202ENST00000491896 JPH4Q96JJ6 628 aa20.15■□□□□ 0.82
C3orf49-202ENST00000491896 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
C3orf49-202ENST00000491896 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
C3orf49-202ENST00000491896 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
C3orf49-202ENST00000491896 KIF21BO75037 1637 aa20.08■□□□□ 0.8
C3orf49-202ENST00000491896 MSH5O43196 834 aa20.06■□□□□ 0.8
C3orf49-202ENST00000491896 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
C3orf49-202ENST00000491896 GOLGA3Q08378 1498 aa20.02■□□□□ 0.8
C3orf49-202ENST00000491896 DISP1Q96F81 1524 aa20.02■□□□□ 0.79
C3orf49-202ENST00000491896 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
C3orf49-202ENST00000491896 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
C3orf49-202ENST00000491896 ADCY10Q96PN6 1610 aa19.93■□□□□ 0.78
C3orf49-202ENST00000491896 PTPRGP23470 1445 aa19.93■□□□□ 0.78
C3orf49-202ENST00000491896 UHRF1BP1LA0JNW5 1464 aa19.92■□□□□ 0.78
C3orf49-202ENST00000491896 MAPKBP1O60336 1514 aa19.92■□□□□ 0.78
C3orf49-202ENST00000491896 SAMD9Q5K651 1589 aa19.91■□□□□ 0.78
C3orf49-202ENST00000491896 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
C3orf49-202ENST00000491896 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
C3orf49-202ENST00000491896 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
C3orf49-202ENST00000491896 KDM5BQ9UGL1 1544 aa19.8■□□□□ 0.76
C3orf49-202ENST00000491896 ABCA8O94911 1581 aa19.79■□□□□ 0.76
C3orf49-202ENST00000491896 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
C3orf49-202ENST00000491896 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
C3orf49-202ENST00000491896 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
C3orf49-202ENST00000491896 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
C3orf49-202ENST00000491896 DIP2BQ9P265 1576 aa19.73■□□□□ 0.75
C3orf49-202ENST00000491896 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
C3orf49-202ENST00000491896 ZCCHC11Q5TAX3 1644 aaKnown RBP19.7■□□□□ 0.74
C3orf49-202ENST00000491896 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
C3orf49-202ENST00000491896 GLI2P10070 1586 aa19.67■□□□□ 0.74
C3orf49-202ENST00000491896 RAPGEF6Q8TEU7 1601 aa19.67■□□□□ 0.74
C3orf49-202ENST00000491896 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
C3orf49-202ENST00000491896 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
C3orf49-202ENST00000491896 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
C3orf49-202ENST00000491896 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
C3orf49-202ENST00000491896 FMN1Q68DA7 1419 aa19.61■□□□□ 0.73
C3orf49-202ENST00000491896 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
C3orf49-202ENST00000491896 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
C3orf49-202ENST00000491896 EPRSP07814 1512 aaKnown RBP19.57■□□□□ 0.72
C3orf49-202ENST00000491896 NUP153P49790 1475 aaKnown RBP19.57■□□□□ 0.72
C3orf49-202ENST00000491896 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
C3orf49-202ENST00000491896 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
C3orf49-202ENST00000491896 ATP10BO94823 1461 aa19.54■□□□□ 0.72
C3orf49-202ENST00000491896 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
C3orf49-202ENST00000491896 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.71
C3orf49-202ENST00000491896 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
C3orf49-202ENST00000491896 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
C3orf49-202ENST00000491896 CLIP1P30622 1438 aa19.47■□□□□ 0.71
C3orf49-202ENST00000491896 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
C3orf49-202ENST00000491896 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
C3orf49-202ENST00000491896 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
C3orf49-202ENST00000491896 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
C3orf49-202ENST00000491896 CCDC18Q5T9S5 1454 aa19.43■□□□□ 0.7
C3orf49-202ENST00000491896 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
C3orf49-202ENST00000491896 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
C3orf49-202ENST00000491896 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
C3orf49-202ENST00000491896 KDM6BO15054 1643 aa19.39■□□□□ 0.69
C3orf49-202ENST00000491896 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
C3orf49-202ENST00000491896 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
C3orf49-202ENST00000491896 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
C3orf49-202ENST00000491896 CD109Q6YHK3 1445 aa19.36■□□□□ 0.69
C3orf49-202ENST00000491896 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
C3orf49-202ENST00000491896 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
C3orf49-202ENST00000491896 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
C3orf49-202ENST00000491896 LRRIQ1Q96JM4 1722 aa19.32■□□□□ 0.68
C3orf49-202ENST00000491896 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
C3orf49-202ENST00000491896 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
C3orf49-202ENST00000491896 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
C3orf49-202ENST00000491896 NEO1Q92859 1461 aa19.3■□□□□ 0.68
C3orf49-202ENST00000491896 KIF14Q15058 1648 aa19.3■□□□□ 0.68
C3orf49-202ENST00000491896 TROQ12816 1431 aaPredicted RBP19.29■□□□□ 0.68
C3orf49-202ENST00000491896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.29■□□□□ 0.68
C3orf49-202ENST00000491896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
C3orf49-202ENST00000491896 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
C3orf49-202ENST00000491896 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
C3orf49-202ENST00000491896 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
C3orf49-202ENST00000491896 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
C3orf49-202ENST00000491896 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
C3orf49-202ENST00000491896 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
C3orf49-202ENST00000491896 PLCH2O75038 1416 aa19.18■□□□□ 0.66
C3orf49-202ENST00000491896 FANCAO15360 1455 aa19.18■□□□□ 0.66
C3orf49-202ENST00000491896 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
C3orf49-202ENST00000491896 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
C3orf49-202ENST00000491896 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
C3orf49-202ENST00000491896 PREX2Q70Z35 1606 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms