RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 CHIC1Q5VXU3 224 aa39.16■■■■□ 3.86
CPNE9-204ENST00000491802 ERCC6L2Q5T890 1561 aa39.14■■■■□ 3.86
CPNE9-204ENST00000491802 RAPGEF2Q9Y4G8 1499 aa39.12■■■■□ 3.85
CPNE9-204ENST00000491802 JPH4Q96JJ6 628 aa39.1■■■■□ 3.85
CPNE9-204ENST00000491802 PRG4Q92954 1404 aaPredicted RBP39.05■■■■□ 3.84
CPNE9-204ENST00000491802 PRXQ9BXM0 1461 aa38.99■■■■□ 3.83
CPNE9-204ENST00000491802 EEA1Q15075 1411 aa38.98■■■■□ 3.83
CPNE9-204ENST00000491802 IQGAP2Q13576 1575 aa38.94■■■■□ 3.82
CPNE9-204ENST00000491802 CSRNP3Q8WYN3 585 aa38.87■■■■□ 3.81
CPNE9-204ENST00000491802 CTTNBP2Q8WZ74 1663 aa38.82■■■■□ 3.81
CPNE9-204ENST00000491802 FAM9AQ8IZU1 332 aaPredicted RBP38.81■■■■□ 3.8
CPNE9-204ENST00000491802 UGGT2Q9NYU1 1516 aa38.76■■■■□ 3.8
CPNE9-204ENST00000491802 CARMIL2Q6F5E8 1435 aa38.73■■■■□ 3.79
CPNE9-204ENST00000491802 DISP1Q96F81 1524 aa38.67■■■■□ 3.78
CPNE9-204ENST00000491802 TNIKQ9UKE5 1360 aa38.62■■■■□ 3.77
CPNE9-204ENST00000491802 KIF21BO75037 1637 aa38.61■■■■□ 3.77
CPNE9-204ENST00000491802 KIAA0556O60303 1618 aa38.58■■■■□ 3.77
CPNE9-204ENST00000491802 PTPRGP23470 1445 aa38.56■■■■□ 3.76
CPNE9-204ENST00000491802 ADCY10Q96PN6 1610 aa38.54■■■■□ 3.76
CPNE9-204ENST00000491802 GOLGA3Q08378 1498 aa38.52■■■■□ 3.76
CPNE9-204ENST00000491802 TRHP20396 242 aaPredicted RBP38.41■■■■□ 3.74
CPNE9-204ENST00000491802 UHRF1BP1LA0JNW5 1464 aa38.41■■■■□ 3.74
CPNE9-204ENST00000491802 MAPKBP1O60336 1514 aa38.39■■■■□ 3.74
CPNE9-204ENST00000491802 TTBK1Q5TCY1 1321 aaPredicted RBP38.38■■■■□ 3.73
CPNE9-204ENST00000491802 UACAQ9BZF9 1416 aa38.35■■■■□ 3.73
CPNE9-204ENST00000491802 NPM1P06748 294 aaKnown RBP eCLIP38.33■■■■□ 3.73
CPNE9-204ENST00000491802 SAMD9Q5K651 1589 aa38.32■■■■□ 3.73
CPNE9-204ENST00000491802 EHMT2Q96KQ7 1210 aa38.32■■■■□ 3.72
CPNE9-204ENST00000491802 ABCC2Q92887 1545 aa38.32■■■■□ 3.72
CPNE9-204ENST00000491802 KIF13AQ9H1H9 1805 aa38.22■■■■□ 3.71
CPNE9-204ENST00000491802 UBTFP17480 764 aaKnown RBP38.21■■■■□ 3.71
CPNE9-204ENST00000491802 KDM5BQ9UGL1 1544 aa38.2■■■■□ 3.71
CPNE9-204ENST00000491802 ABCA8O94911 1581 aa38.19■■■■□ 3.7
CPNE9-204ENST00000491802 ABCC10Q5T3U5 1492 aa38.17■■■■□ 3.7
CPNE9-204ENST00000491802 RANGAP1P46060 587 aaPredicted RBP38.16■■■■□ 3.7
CPNE9-204ENST00000491802 EFCAB5A4FU69 1503 aa38.13■■■■□ 3.69
CPNE9-204ENST00000491802 P3H3Q8IVL6 736 aa38.13■■■■□ 3.69
CPNE9-204ENST00000491802 PLB1Q6P1J6 1458 aa38.13■■■■□ 3.69
CPNE9-204ENST00000491802 DIP2BQ9P265 1576 aa38.12■■■■□ 3.69
CPNE9-204ENST00000491802 ZCCHC11Q5TAX3 1644 aaKnown RBP38.08■■■■□ 3.69
CPNE9-204ENST00000491802 FHOD3Q2V2M9 1422 aa38.03■■■■□ 3.68
CPNE9-204ENST00000491802 ASXL2Q76L83 1435 aa38.03■■■■□ 3.68
CPNE9-204ENST00000491802 FAM69CQ0P6D2 419 aa37.96■■■■□ 3.67
CPNE9-204ENST00000491802 GLI2P10070 1586 aa37.94■■■■□ 3.66
CPNE9-204ENST00000491802 RAPGEF6Q8TEU7 1601 aa37.94■■■■□ 3.66
CPNE9-204ENST00000491802 ARHGAP35Q9NRY4 1499 aa37.89■■■■□ 3.66
CPNE9-204ENST00000491802 WDR7Q9Y4E6 1490 aa37.85■■■■□ 3.65
CPNE9-204ENST00000491802 EPRSP07814 1512 aaKnown RBP37.84■■■■□ 3.65
CPNE9-204ENST00000491802 ATP10BO94823 1461 aa37.81■■■■□ 3.64
CPNE9-204ENST00000491802 NUP153P49790 1475 aaKnown RBP37.77■■■■□ 3.64
CPNE9-204ENST00000491802 MAP3K4Q9Y6R4 1608 aa37.74■■■■□ 3.63
CPNE9-204ENST00000491802 FMN1Q68DA7 1419 aa37.73■■■■□ 3.63
CPNE9-204ENST00000491802 ARID3CA6NKF2 412 aa37.72■■■■□ 3.63
CPNE9-204ENST00000491802 TSPOAP1O95153 1857 aa37.71■■■■□ 3.63
CPNE9-204ENST00000491802 PPRC1Q5VV67 1664 aaKnown RBP37.69■■■■□ 3.62
CPNE9-204ENST00000491802 CLIP1P30622 1438 aa37.68■■■■□ 3.62
CPNE9-204ENST00000491802 CFAP43Q8NDM7 1665 aa37.63■■■■□ 3.61
CPNE9-204ENST00000491802 HECW1Q76N89 1606 aa37.58■■■■□ 3.61
CPNE9-204ENST00000491802 LOC105371045A0A1W2PR82 267 aa37.55■■■■□ 3.6
CPNE9-204ENST00000491802 TEX14Q8IWB6 1497 aa37.54■■■■□ 3.6
CPNE9-204ENST00000491802 CEP162Q5TB80 1403 aa37.53■■■■□ 3.6
CPNE9-204ENST00000491802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.52■■■■□ 3.6
CPNE9-204ENST00000491802 HNRNPUL2Q1KMD3 747 aaKnown RBP37.52■■■■□ 3.6
CPNE9-204ENST00000491802 MAGI3Q5TCQ9 1506 aa37.51■■■■□ 3.59
CPNE9-204ENST00000491802 KDM6BO15054 1643 aa37.5■■■■□ 3.59
CPNE9-204ENST00000491802 ABCA9Q8IUA7 1624 aa37.5■■■■□ 3.59
CPNE9-204ENST00000491802 KCNH8Q96L42 1107 aa37.49■■■■□ 3.59
CPNE9-204ENST00000491802 CDK13Q14004 1512 aaKnown RBP37.48■■■■□ 3.59
CPNE9-204ENST00000491802 PCF11O94913 1555 aaKnown RBP37.47■■■■□ 3.59
CPNE9-204ENST00000491802 CD109Q6YHK3 1445 aa37.47■■■■□ 3.59
CPNE9-204ENST00000491802 ATP1B4Q9UN42 357 aaPredicted RBP37.45■■■■□ 3.59
CPNE9-204ENST00000491802 CASKIN1Q8WXD9 1431 aa37.42■■■■□ 3.58
CPNE9-204ENST00000491802 PLEKHD1A6NEE1 506 aa37.41■■■■□ 3.58
CPNE9-204ENST00000491802 LRRIQ1Q96JM4 1722 aa37.38■■■■□ 3.57
CPNE9-204ENST00000491802 FYCO1Q9BQS8 1478 aa37.36■■■■□ 3.57
CPNE9-204ENST00000491802 CCDC18Q5T9S5 1454 aa37.31■■■■□ 3.56
CPNE9-204ENST00000491802 CDK11AQ9UQ88 783 aaPredicted RBP37.27■■■■□ 3.56
CPNE9-204ENST00000491802 COL17A1Q9UMD9 1497 aaPredicted RBP37.26■■■■□ 3.56
CPNE9-204ENST00000491802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.26■■■■□ 3.55
CPNE9-204ENST00000491802 PHLDB1Q86UU1 1377 aa37.24■■■■□ 3.55
CPNE9-204ENST00000491802 TTC37Q6PGP7 1564 aa37.2■■■■□ 3.55
CPNE9-204ENST00000491802 NEO1Q92859 1461 aa37.2■■■■□ 3.54
CPNE9-204ENST00000491802 TROQ12816 1431 aaPredicted RBP37.19■■■■□ 3.54
CPNE9-204ENST00000491802 ARAP3Q8WWN8 1544 aa37.19■■■■□ 3.54
CPNE9-204ENST00000491802 KIF14Q15058 1648 aa37.14■■■■□ 3.54
CPNE9-204ENST00000491802 CFAP74Q9C0B2 1584 aa37.11■■■■□ 3.53
CPNE9-204ENST00000491802 VPS8Q8N3P4 1428 aa37.08■■■■□ 3.53
CPNE9-204ENST00000491802 MYO5CQ9NQX4 1742 aa37.06■■■■□ 3.52
CPNE9-204ENST00000491802 PLCH2O75038 1416 aa37.04■■■■□ 3.52
CPNE9-204ENST00000491802 FANCAO15360 1455 aa37.03■■■■□ 3.52
CPNE9-204ENST00000491802 AKNAQ7Z591 1439 aa36.96■■■■□ 3.51
CPNE9-204ENST00000491802 FRMPD1Q5SYB0 1578 aa36.91■■■■□ 3.5
CPNE9-204ENST00000491802 RICTORQ6R327 1708 aa36.89■■■■□ 3.5
CPNE9-204ENST00000491802 MTUS2Q5JR59 1369 aa36.89■■■■□ 3.5
CPNE9-204ENST00000491802 PREX2Q70Z35 1606 aa36.88■■■■□ 3.49
CPNE9-204ENST00000491802 CDC42BPBQ9Y5S2 1711 aa36.87■■■■□ 3.49
CPNE9-204ENST00000491802 DENND4BO75064 1496 aaPredicted RBP36.87■■■■□ 3.49
CPNE9-204ENST00000491802 EHBP1L1Q8N3D4 1523 aa36.86■■■■□ 3.49
CPNE9-204ENST00000491802 TIAM1Q13009 1591 aa36.85■■■■□ 3.49
CPNE9-204ENST00000491802 EFCAB2Q5VUJ9 269 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms