RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
SEC61A1-206ENST00000491668 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
SEC61A1-206ENST00000491668 CARMIL1Q5VZK9 1371 aa21.9■■□□□ 1.1
SEC61A1-206ENST00000491668 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.09
SEC61A1-206ENST00000491668 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
SEC61A1-206ENST00000491668 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
SEC61A1-206ENST00000491668 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
SEC61A1-206ENST00000491668 DISP1Q96F81 1524 aa21.64■■□□□ 1.05
SEC61A1-206ENST00000491668 PTPRGP23470 1445 aa21.63■■□□□ 1.05
SEC61A1-206ENST00000491668 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
SEC61A1-206ENST00000491668 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SEC61A1-206ENST00000491668 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
SEC61A1-206ENST00000491668 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
SEC61A1-206ENST00000491668 CARMIL2Q6F5E8 1435 aa21.6■■□□□ 1.05
SEC61A1-206ENST00000491668 MAPKBP1O60336 1514 aa21.59■■□□□ 1.05
SEC61A1-206ENST00000491668 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
SEC61A1-206ENST00000491668 ABCC10Q5T3U5 1492 aa21.55■■□□□ 1.04
SEC61A1-206ENST00000491668 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
SEC61A1-206ENST00000491668 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
SEC61A1-206ENST00000491668 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
SEC61A1-206ENST00000491668 DIP2BQ9P265 1576 aa21.51■■□□□ 1.03
SEC61A1-206ENST00000491668 ABCC2Q92887 1545 aa21.5■■□□□ 1.03
SEC61A1-206ENST00000491668 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
SEC61A1-206ENST00000491668 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
SEC61A1-206ENST00000491668 UACAQ9BZF9 1416 aa21.47■■□□□ 1.03
SEC61A1-206ENST00000491668 CSRNP3Q8WYN3 585 aa21.46■■□□□ 1.03
SEC61A1-206ENST00000491668 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
SEC61A1-206ENST00000491668 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.02
SEC61A1-206ENST00000491668 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
SEC61A1-206ENST00000491668 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
SEC61A1-206ENST00000491668 EEA1Q15075 1411 aa21.38■■□□□ 1.01
SEC61A1-206ENST00000491668 PLB1Q6P1J6 1458 aa21.37■■□□□ 1.01
SEC61A1-206ENST00000491668 ZCCHC11Q5TAX3 1644 aaKnown RBP21.34■■□□□ 1.01
SEC61A1-206ENST00000491668 ABCA8O94911 1581 aa21.33■■□□□ 1.01
SEC61A1-206ENST00000491668 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
SEC61A1-206ENST00000491668 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
SEC61A1-206ENST00000491668 TSPOAP1O95153 1857 aa21.32■■□□□ 1
SEC61A1-206ENST00000491668 GLI2P10070 1586 aa21.31■■□□□ 1
SEC61A1-206ENST00000491668 EPRSP07814 1512 aaKnown RBP21.28■■□□□ 1
SEC61A1-206ENST00000491668 PPRC1Q5VV67 1664 aaKnown RBP21.28■■□□□ 1
SEC61A1-206ENST00000491668 SAMD9Q5K651 1589 aa21.27■■□□□ 1
SEC61A1-206ENST00000491668 P3H3Q8IVL6 736 aa21.27■■□□□ 1
SEC61A1-206ENST00000491668 KIF21BO75037 1637 aa21.23■□□□□ 0.99
SEC61A1-206ENST00000491668 WDR7Q9Y4E6 1490 aa21.22■□□□□ 0.99
SEC61A1-206ENST00000491668 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
SEC61A1-206ENST00000491668 KDM6BO15054 1643 aa21.21■□□□□ 0.99
SEC61A1-206ENST00000491668 ATP10BO94823 1461 aa21.15■□□□□ 0.98
SEC61A1-206ENST00000491668 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
SEC61A1-206ENST00000491668 COL17A1Q9UMD9 1497 aaPredicted RBP21.14■□□□□ 0.98
SEC61A1-206ENST00000491668 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
SEC61A1-206ENST00000491668 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
SEC61A1-206ENST00000491668 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
SEC61A1-206ENST00000491668 KCNH8Q96L42 1107 aa21.1■□□□□ 0.97
SEC61A1-206ENST00000491668 NUP153P49790 1475 aaKnown RBP21.08■□□□□ 0.97
SEC61A1-206ENST00000491668 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
SEC61A1-206ENST00000491668 EFCAB5A4FU69 1503 aa21.06■□□□□ 0.96
SEC61A1-206ENST00000491668 TEX14Q8IWB6 1497 aa21.06■□□□□ 0.96
SEC61A1-206ENST00000491668 CFAP43Q8NDM7 1665 aa21.05■□□□□ 0.96
SEC61A1-206ENST00000491668 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
SEC61A1-206ENST00000491668 MAGI3Q5TCQ9 1506 aa21.04■□□□□ 0.96
SEC61A1-206ENST00000491668 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
SEC61A1-206ENST00000491668 ABCA9Q8IUA7 1624 aa20.97■□□□□ 0.95
SEC61A1-206ENST00000491668 ARHGAP35Q9NRY4 1499 aa20.97■□□□□ 0.95
SEC61A1-206ENST00000491668 KDM4FA0A1W2PPD8 638 aa20.97■□□□□ 0.95
SEC61A1-206ENST00000491668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
SEC61A1-206ENST00000491668 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
SEC61A1-206ENST00000491668 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.94
SEC61A1-206ENST00000491668 ARAP3Q8WWN8 1544 aa20.88■□□□□ 0.93
SEC61A1-206ENST00000491668 PLEKHD1A6NEE1 506 aa20.86■□□□□ 0.93
SEC61A1-206ENST00000491668 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
SEC61A1-206ENST00000491668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.92
SEC61A1-206ENST00000491668 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
SEC61A1-206ENST00000491668 NEO1Q92859 1461 aa20.81■□□□□ 0.92
SEC61A1-206ENST00000491668 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
SEC61A1-206ENST00000491668 HECW1Q76N89 1606 aa20.8■□□□□ 0.92
SEC61A1-206ENST00000491668 PHLDB1Q86UU1 1377 aa20.8■□□□□ 0.92
SEC61A1-206ENST00000491668 LRRIQ1Q96JM4 1722 aa20.78■□□□□ 0.92
SEC61A1-206ENST00000491668 RAPGEF3O95398 923 aa20.77■□□□□ 0.92
SEC61A1-206ENST00000491668 FRMPD1Q5SYB0 1578 aa20.76■□□□□ 0.91
SEC61A1-206ENST00000491668 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
SEC61A1-206ENST00000491668 FANCAO15360 1455 aa20.72■□□□□ 0.91
SEC61A1-206ENST00000491668 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
SEC61A1-206ENST00000491668 KIF14Q15058 1648 aa20.71■□□□□ 0.91
SEC61A1-206ENST00000491668 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
SEC61A1-206ENST00000491668 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
SEC61A1-206ENST00000491668 PLCH2O75038 1416 aa20.69■□□□□ 0.9
SEC61A1-206ENST00000491668 CLIP1P30622 1438 aa20.69■□□□□ 0.9
SEC61A1-206ENST00000491668 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
SEC61A1-206ENST00000491668 RICTORQ6R327 1708 aa20.67■□□□□ 0.9
SEC61A1-206ENST00000491668 DENND4BO75064 1496 aaPredicted RBP20.66■□□□□ 0.9
SEC61A1-206ENST00000491668 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
SEC61A1-206ENST00000491668 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
SEC61A1-206ENST00000491668 FYCO1Q9BQS8 1478 aa20.62■□□□□ 0.89
SEC61A1-206ENST00000491668 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
SEC61A1-206ENST00000491668 CCDC18Q5T9S5 1454 aa20.61■□□□□ 0.89
SEC61A1-206ENST00000491668 ZMYM4Q5VZL5 1548 aa20.59■□□□□ 0.89
SEC61A1-206ENST00000491668 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
SEC61A1-206ENST00000491668 SCAPERQ9BY12 1400 aa20.58■□□□□ 0.88
SEC61A1-206ENST00000491668 POGZQ7Z3K3 1410 aa20.57■□□□□ 0.88
SEC61A1-206ENST00000491668 YEATS2Q9ULM3 1422 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms