RNA–Protein interactions for RNA: ENST00000490925.5

ATP13A4-211, Transcript of ATPase 13A4, humanhuman

TSL 1 (best)

Gene ATP13A4, Length 3,070 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-211ENST00000490925 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
ATP13A4-211ENST00000490925 DHX57Q6P158 1386 aaKnown RBP10.85□□□□□ -0.67
ATP13A4-211ENST00000490925 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
ATP13A4-211ENST00000490925 LAMC3Q9Y6N6 1575 aa10.85□□□□□ -0.67
ATP13A4-211ENST00000490925 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
ATP13A4-211ENST00000490925 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.67
ATP13A4-211ENST00000490925 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
ATP13A4-211ENST00000490925 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
ATP13A4-211ENST00000490925 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
ATP13A4-211ENST00000490925 LRRC9Q6ZRR7 1453 aa10.81□□□□□ -0.68
ATP13A4-211ENST00000490925 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
ATP13A4-211ENST00000490925 CUL7Q14999 1698 aa10.8□□□□□ -0.68
ATP13A4-211ENST00000490925 PHLDB1Q86UU1 1377 aa10.79□□□□□ -0.68
ATP13A4-211ENST00000490925 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
ATP13A4-211ENST00000490925 TDRD9Q8NDG6 1382 aaKnown RBP10.78□□□□□ -0.68
ATP13A4-211ENST00000490925 CFAP43Q8NDM7 1665 aa10.78□□□□□ -0.68
ATP13A4-211ENST00000490925 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
ATP13A4-211ENST00000490925 FHAD1B1AJZ9 1412 aa10.77□□□□□ -0.68
ATP13A4-211ENST00000490925 CTTNBP2Q8WZ74 1663 aa10.77□□□□□ -0.69
ATP13A4-211ENST00000490925 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
ATP13A4-211ENST00000490925 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
ATP13A4-211ENST00000490925 EFCAB5A4FU69 1503 aa10.75□□□□□ -0.69
ATP13A4-211ENST00000490925 ITGAEP38570 1179 aa10.75□□□□□ -0.69
ATP13A4-211ENST00000490925 GAPVD1Q14C86 1478 aa10.75□□□□□ -0.69
ATP13A4-211ENST00000490925 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
ATP13A4-211ENST00000490925 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
ATP13A4-211ENST00000490925 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
ATP13A4-211ENST00000490925 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
ATP13A4-211ENST00000490925 RAB3GAP2Q9H2M9 1393 aa10.73□□□□□ -0.69
ATP13A4-211ENST00000490925 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
ATP13A4-211ENST00000490925 MAPKBP1O60336 1514 aa10.72□□□□□ -0.69
ATP13A4-211ENST00000490925 SAMD9Q5K651 1589 aa10.71□□□□□ -0.69
ATP13A4-211ENST00000490925 ATP1B4Q9UN42 357 aaPredicted RBP10.7□□□□□ -0.7
ATP13A4-211ENST00000490925 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
ATP13A4-211ENST00000490925 ANP32EQ9BTT0 268 aa10.69□□□□□ -0.7
ATP13A4-211ENST00000490925 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
ATP13A4-211ENST00000490925 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
ATP13A4-211ENST00000490925 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
ATP13A4-211ENST00000490925 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
ATP13A4-211ENST00000490925 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
ATP13A4-211ENST00000490925 PBRM1Q86U86 1689 aa10.64□□□□□ -0.71
ATP13A4-211ENST00000490925 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
ATP13A4-211ENST00000490925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATP13A4-211ENST00000490925 MRC2Q9UBG0 1479 aa10.62□□□□□ -0.71
ATP13A4-211ENST00000490925 PTPRKQ15262 1439 aa10.62□□□□□ -0.71
ATP13A4-211ENST00000490925 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
ATP13A4-211ENST00000490925 ADAMTS12P58397 1594 aa10.62□□□□□ -0.71
ATP13A4-211ENST00000490925 ZNF608Q9ULD9 1512 aaPredicted RBP10.6□□□□□ -0.71
ATP13A4-211ENST00000490925 MTUS2Q5JR59 1369 aa10.6□□□□□ -0.71
ATP13A4-211ENST00000490925 NCOA2Q15596 1464 aa10.59□□□□□ -0.71
ATP13A4-211ENST00000490925 SIN3AQ96ST3 1273 aa10.59□□□□□ -0.71
ATP13A4-211ENST00000490925 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
ATP13A4-211ENST00000490925 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
ATP13A4-211ENST00000490925 IQGAP2Q13576 1575 aa10.58□□□□□ -0.72
ATP13A4-211ENST00000490925 WDR62O43379 1518 aa10.56□□□□□ -0.72
ATP13A4-211ENST00000490925 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
ATP13A4-211ENST00000490925 EHBP1L1Q8N3D4 1523 aa10.56□□□□□ -0.72
ATP13A4-211ENST00000490925 UGGT2Q9NYU1 1516 aa10.56□□□□□ -0.72
ATP13A4-211ENST00000490925 SUPT6HQ7KZ85 1726 aaKnown RBP10.55□□□□□ -0.72
ATP13A4-211ENST00000490925 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
ATP13A4-211ENST00000490925 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
ATP13A4-211ENST00000490925 CDK13Q14004 1512 aaKnown RBP10.54□□□□□ -0.72
ATP13A4-211ENST00000490925 PTPN23Q9H3S7 1636 aa10.53□□□□□ -0.72
ATP13A4-211ENST00000490925 NAIPQ13075 1403 aa10.53□□□□□ -0.72
ATP13A4-211ENST00000490925 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
ATP13A4-211ENST00000490925 CCDC18Q5T9S5 1454 aa10.53□□□□□ -0.72
ATP13A4-211ENST00000490925 HECW1Q76N89 1606 aa10.52□□□□□ -0.73
ATP13A4-211ENST00000490925 BCL11AQ9H165 835 aa10.52□□□□□ -0.73
ATP13A4-211ENST00000490925 DISP1Q96F81 1524 aa10.51□□□□□ -0.73
ATP13A4-211ENST00000490925 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
ATP13A4-211ENST00000490925 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
ATP13A4-211ENST00000490925 ARID3CA6NKF2 412 aa10.49□□□□□ -0.73
ATP13A4-211ENST00000490925 NEFLP07196 543 aa10.49□□□□□ -0.73
ATP13A4-211ENST00000490925 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
ATP13A4-211ENST00000490925 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
ATP13A4-211ENST00000490925 KIAA0556O60303 1618 aa10.48□□□□□ -0.73
ATP13A4-211ENST00000490925 FKBP8Q14318 412 aa10.48□□□□□ -0.73
ATP13A4-211ENST00000490925 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
ATP13A4-211ENST00000490925 GRIN2AQ12879 1464 aa10.48□□□□□ -0.73
ATP13A4-211ENST00000490925 PPP1R15AO75807 674 aaPredicted RBP10.47□□□□□ -0.73
ATP13A4-211ENST00000490925 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
ATP13A4-211ENST00000490925 KDM6BO15054 1643 aa10.47□□□□□ -0.73
ATP13A4-211ENST00000490925 CCER2I3L3R5 266 aa10.46□□□□□ -0.73
ATP13A4-211ENST00000490925 KDM5BQ9UGL1 1544 aa10.46□□□□□ -0.74
ATP13A4-211ENST00000490925 NUP153P49790 1475 aaKnown RBP10.46□□□□□ -0.74
ATP13A4-211ENST00000490925 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
ATP13A4-211ENST00000490925 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
ATP13A4-211ENST00000490925 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
ATP13A4-211ENST00000490925 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
ATP13A4-211ENST00000490925 CEP170Q5SW79 1584 aa10.44□□□□□ -0.74
ATP13A4-211ENST00000490925 BCANQ96GW7 911 aa10.43□□□□□ -0.74
ATP13A4-211ENST00000490925 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
ATP13A4-211ENST00000490925 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
ATP13A4-211ENST00000490925 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
ATP13A4-211ENST00000490925 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
ATP13A4-211ENST00000490925 RAPGEF6Q8TEU7 1601 aa10.41□□□□□ -0.74
ATP13A4-211ENST00000490925 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
ATP13A4-211ENST00000490925 MAGI1Q96QZ7 1491 aaPredicted RBP10.41□□□□□ -0.74
ATP13A4-211ENST00000490925 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
ATP13A4-211ENST00000490925 ZNF644Q9H582 1327 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms