RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 KIF27Q86VH2 1401 aa29.2■■■□□ 2.26
SRGAP3-209ENST00000490889 CUL7Q14999 1698 aa29.15■■■□□ 2.26
SRGAP3-209ENST00000490889 KIAA0586Q9BVV6 1533 aa29.12■■■□□ 2.25
SRGAP3-209ENST00000490889 KIF13AQ9H1H9 1805 aa29.11■■■□□ 2.25
SRGAP3-209ENST00000490889 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
SRGAP3-209ENST00000490889 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.23
SRGAP3-209ENST00000490889 MAPKBP1O60336 1514 aa28.96■■■□□ 2.23
SRGAP3-209ENST00000490889 ABCC10Q5T3U5 1492 aa28.95■■■□□ 2.22
SRGAP3-209ENST00000490889 NPM1P06748 294 aaKnown RBP eCLIP28.91■■■□□ 2.22
SRGAP3-209ENST00000490889 DIP2BQ9P265 1576 aa28.91■■■□□ 2.22
SRGAP3-209ENST00000490889 FAM69CQ0P6D2 419 aa28.89■■■□□ 2.22
SRGAP3-209ENST00000490889 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
SRGAP3-209ENST00000490889 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
SRGAP3-209ENST00000490889 PTPRGP23470 1445 aa28.84■■■□□ 2.21
SRGAP3-209ENST00000490889 TTBK1Q5TCY1 1321 aaPredicted RBP28.79■■■□□ 2.2
SRGAP3-209ENST00000490889 CARMIL2Q6F5E8 1435 aa28.78■■■□□ 2.2
SRGAP3-209ENST00000490889 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
SRGAP3-209ENST00000490889 DISP1Q96F81 1524 aa28.74■■■□□ 2.19
SRGAP3-209ENST00000490889 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
SRGAP3-209ENST00000490889 ABCC2Q92887 1545 aa28.71■■■□□ 2.19
SRGAP3-209ENST00000490889 TSPOAP1O95153 1857 aa28.68■■■□□ 2.18
SRGAP3-209ENST00000490889 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
SRGAP3-209ENST00000490889 UHRF1BP1LA0JNW5 1464 aa28.66■■■□□ 2.18
SRGAP3-209ENST00000490889 UACAQ9BZF9 1416 aa28.63■■■□□ 2.17
SRGAP3-209ENST00000490889 KDM6BO15054 1643 aa28.63■■■□□ 2.17
SRGAP3-209ENST00000490889 ASXL2Q76L83 1435 aa28.62■■■□□ 2.17
SRGAP3-209ENST00000490889 KIAA0556O60303 1618 aa28.61■■■□□ 2.17
SRGAP3-209ENST00000490889 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
SRGAP3-209ENST00000490889 GLI2P10070 1586 aa28.55■■■□□ 2.16
SRGAP3-209ENST00000490889 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
SRGAP3-209ENST00000490889 KDM5BQ9UGL1 1544 aa28.54■■■□□ 2.16
SRGAP3-209ENST00000490889 PPRC1Q5VV67 1664 aaKnown RBP28.54■■■□□ 2.16
SRGAP3-209ENST00000490889 ZCCHC11Q5TAX3 1644 aaKnown RBP28.51■■■□□ 2.15
SRGAP3-209ENST00000490889 PRXQ9BXM0 1461 aa28.47■■■□□ 2.15
SRGAP3-209ENST00000490889 EPRSP07814 1512 aaKnown RBP28.46■■■□□ 2.15
SRGAP3-209ENST00000490889 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
SRGAP3-209ENST00000490889 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
SRGAP3-209ENST00000490889 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
SRGAP3-209ENST00000490889 ABCA8O94911 1581 aa28.36■■■□□ 2.13
SRGAP3-209ENST00000490889 COL17A1Q9UMD9 1497 aaPredicted RBP28.35■■■□□ 2.13
SRGAP3-209ENST00000490889 WDR7Q9Y4E6 1490 aa28.33■■■□□ 2.13
SRGAP3-209ENST00000490889 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
SRGAP3-209ENST00000490889 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
SRGAP3-209ENST00000490889 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
SRGAP3-209ENST00000490889 CFAP43Q8NDM7 1665 aa28.17■■■□□ 2.1
SRGAP3-209ENST00000490889 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
SRGAP3-209ENST00000490889 CD109Q6YHK3 1445 aa28.15■■■□□ 2.1
SRGAP3-209ENST00000490889 SAMD9Q5K651 1589 aa28.15■■■□□ 2.1
SRGAP3-209ENST00000490889 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
SRGAP3-209ENST00000490889 MAGI3Q5TCQ9 1506 aa28.14■■■□□ 2.1
SRGAP3-209ENST00000490889 ATP10BO94823 1461 aa28.11■■■□□ 2.09
SRGAP3-209ENST00000490889 ARID3CA6NKF2 412 aa28.11■■■□□ 2.09
SRGAP3-209ENST00000490889 EEA1Q15075 1411 aa28.05■■■□□ 2.08
SRGAP3-209ENST00000490889 RAPGEF6Q8TEU7 1601 aa28.03■■■□□ 2.08
SRGAP3-209ENST00000490889 ABCA9Q8IUA7 1624 aa27.97■■■□□ 2.07
SRGAP3-209ENST00000490889 FAM9AQ8IZU1 332 aaPredicted RBP27.97■■■□□ 2.07
SRGAP3-209ENST00000490889 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
SRGAP3-209ENST00000490889 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.07
SRGAP3-209ENST00000490889 NUP153P49790 1475 aaKnown RBP27.95■■■□□ 2.06
SRGAP3-209ENST00000490889 ARAP3Q8WWN8 1544 aa27.92■■■□□ 2.06
SRGAP3-209ENST00000490889 KIF21BO75037 1637 aa27.89■■■□□ 2.06
SRGAP3-209ENST00000490889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
SRGAP3-209ENST00000490889 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
SRGAP3-209ENST00000490889 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
SRGAP3-209ENST00000490889 PHLDB1Q86UU1 1377 aa27.8■■■□□ 2.04
SRGAP3-209ENST00000490889 NEO1Q92859 1461 aa27.79■■■□□ 2.04
SRGAP3-209ENST00000490889 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
SRGAP3-209ENST00000490889 RAPGEF3O95398 923 aa27.76■■■□□ 2.03
SRGAP3-209ENST00000490889 FRMPD1Q5SYB0 1578 aa27.76■■■□□ 2.03
SRGAP3-209ENST00000490889 PLEKHD1A6NEE1 506 aa27.7■■■□□ 2.02
SRGAP3-209ENST00000490889 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
SRGAP3-209ENST00000490889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.7■■■□□ 2.02
SRGAP3-209ENST00000490889 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
SRGAP3-209ENST00000490889 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
SRGAP3-209ENST00000490889 TTC37Q6PGP7 1564 aa27.67■■■□□ 2.02
SRGAP3-209ENST00000490889 ADAMTSL3P82987 1691 aa27.64■■■□□ 2.02
SRGAP3-209ENST00000490889 RICTORQ6R327 1708 aa27.62■■■□□ 2.01
SRGAP3-209ENST00000490889 UBTFP17480 764 aaKnown RBP27.62■■■□□ 2.01
SRGAP3-209ENST00000490889 FANCAO15360 1455 aa27.62■■■□□ 2.01
SRGAP3-209ENST00000490889 AKNAQ7Z591 1439 aa27.61■■■□□ 2.01
SRGAP3-209ENST00000490889 ARHGAP35Q9NRY4 1499 aa27.61■■■□□ 2.01
SRGAP3-209ENST00000490889 DENND4BO75064 1496 aaPredicted RBP27.59■■■□□ 2.01
SRGAP3-209ENST00000490889 CFAP74Q9C0B2 1584 aa27.59■■■□□ 2.01
SRGAP3-209ENST00000490889 BCORL1Q5H9F3 1711 aa27.58■■■□□ 2.01
SRGAP3-209ENST00000490889 ARHGEF40Q8TER5 1519 aa27.57■■■□□ 2
SRGAP3-209ENST00000490889 PTPRMP28827 1452 aa27.57■■■□□ 2
SRGAP3-209ENST00000490889 FMN1Q68DA7 1419 aa27.54■■■□□ 2
SRGAP3-209ENST00000490889 HECW1Q76N89 1606 aa27.54■■■□□ 2
SRGAP3-209ENST00000490889 MADDQ8WXG6 1647 aa27.52■■■□□ 2
SRGAP3-209ENST00000490889 ILDR1Q86SU0 546 aaPredicted RBP27.52■■■□□ 2
SRGAP3-209ENST00000490889 ZMYM4Q5VZL5 1548 aa27.51■■□□□ 1.99
SRGAP3-209ENST00000490889 ATP1B4Q9UN42 357 aaPredicted RBP27.5■■□□□ 1.99
SRGAP3-209ENST00000490889 ARID4BQ4LE39 1312 aaPredicted RBP27.49■■□□□ 1.99
SRGAP3-209ENST00000490889 PLCH2O75038 1416 aa27.49■■□□□ 1.99
SRGAP3-209ENST00000490889 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
SRGAP3-209ENST00000490889 YEATS2Q9ULM3 1422 aa27.46■■□□□ 1.99
SRGAP3-209ENST00000490889 KIF14Q15058 1648 aa27.45■■□□□ 1.99
SRGAP3-209ENST00000490889 LRRIQ1Q96JM4 1722 aa27.45■■□□□ 1.99
SRGAP3-209ENST00000490889 ZFYVE16Q7Z3T8 1539 aa27.44■■□□□ 1.98
SRGAP3-209ENST00000490889 MYO5CQ9NQX4 1742 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms