RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
ARHGEF39-205ENST00000490638 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
ARHGEF39-205ENST00000490638 NCAPD3P42695 1498 aa20■□□□□ 0.79
ARHGEF39-205ENST00000490638 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF39-205ENST00000490638 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
ARHGEF39-205ENST00000490638 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
ARHGEF39-205ENST00000490638 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
ARHGEF39-205ENST00000490638 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
ARHGEF39-205ENST00000490638 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
ARHGEF39-205ENST00000490638 SLC24A1O60721 1099 aa19.92■□□□□ 0.78
ARHGEF39-205ENST00000490638 NEFMP07197 916 aa19.91■□□□□ 0.78
ARHGEF39-205ENST00000490638 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
ARHGEF39-205ENST00000490638 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
ARHGEF39-205ENST00000490638 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
ARHGEF39-205ENST00000490638 MLECQ14165 292 aa19.85■□□□□ 0.77
ARHGEF39-205ENST00000490638 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
ARHGEF39-205ENST00000490638 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
ARHGEF39-205ENST00000490638 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
ARHGEF39-205ENST00000490638 C14orf37Q86TY3 774 aa19.78■□□□□ 0.76
ARHGEF39-205ENST00000490638 EFCAB2Q5VUJ9 269 aa19.78■□□□□ 0.76
ARHGEF39-205ENST00000490638 ACIN1Q9UKV3 1341 aaKnown RBP19.77■□□□□ 0.76
ARHGEF39-205ENST00000490638 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
ARHGEF39-205ENST00000490638 GGT6Q6P531 493 aa19.74■□□□□ 0.75
ARHGEF39-205ENST00000490638 DDX10Q13206 875 aaKnown RBP19.73■□□□□ 0.75
ARHGEF39-205ENST00000490638 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
ARHGEF39-205ENST00000490638 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF39-205ENST00000490638 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
ARHGEF39-205ENST00000490638 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
ARHGEF39-205ENST00000490638 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
ARHGEF39-205ENST00000490638 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
ARHGEF39-205ENST00000490638 NESP48681 1621 aa19.69■□□□□ 0.74
ARHGEF39-205ENST00000490638 MYT1Q01538 1121 aa19.69■□□□□ 0.74
ARHGEF39-205ENST00000490638 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
ARHGEF39-205ENST00000490638 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
ARHGEF39-205ENST00000490638 CLSPNQ9HAW4 1339 aa19.68■□□□□ 0.74
ARHGEF39-205ENST00000490638 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF39-205ENST00000490638 PLEKHG5O94827 1062 aa19.67■□□□□ 0.74
ARHGEF39-205ENST00000490638 PTPRGP23470 1445 aa19.66■□□□□ 0.74
ARHGEF39-205ENST00000490638 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
ARHGEF39-205ENST00000490638 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
ARHGEF39-205ENST00000490638 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
ARHGEF39-205ENST00000490638 IGF1RP08069 1367 aa19.63■□□□□ 0.73
ARHGEF39-205ENST00000490638 DAXXQ9UER7 740 aaPredicted RBP19.61■□□□□ 0.73
ARHGEF39-205ENST00000490638 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
ARHGEF39-205ENST00000490638 CFTRP13569 1480 aa19.6■□□□□ 0.73
ARHGEF39-205ENST00000490638 KANK1Q14678 1352 aa19.6■□□□□ 0.73
ARHGEF39-205ENST00000490638 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
ARHGEF39-205ENST00000490638 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
ARHGEF39-205ENST00000490638 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
ARHGEF39-205ENST00000490638 HNRNPMP52272 730 aaKnown RBP eCLIP19.56■□□□□ 0.72
ARHGEF39-205ENST00000490638 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
ARHGEF39-205ENST00000490638 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
ARHGEF39-205ENST00000490638 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
ARHGEF39-205ENST00000490638 KIF3BO15066 747 aa19.53■□□□□ 0.72
ARHGEF39-205ENST00000490638 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
ARHGEF39-205ENST00000490638 POGKQ9P215 609 aa19.53■□□□□ 0.72
ARHGEF39-205ENST00000490638 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.72
ARHGEF39-205ENST00000490638 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF39-205ENST00000490638 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
ARHGEF39-205ENST00000490638 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
ARHGEF39-205ENST00000490638 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
ARHGEF39-205ENST00000490638 HDGFP51858 240 aaKnown RBP19.5■□□□□ 0.71
ARHGEF39-205ENST00000490638 PKD2Q13563 968 aa19.48■□□□□ 0.71
ARHGEF39-205ENST00000490638 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
ARHGEF39-205ENST00000490638 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
ARHGEF39-205ENST00000490638 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
ARHGEF39-205ENST00000490638 RSPH4AQ5TD94 716 aa19.47■□□□□ 0.71
ARHGEF39-205ENST00000490638 A0A0G2JS52 829 aa19.46■□□□□ 0.71
ARHGEF39-205ENST00000490638 CDCA8Q53HL2 280 aa19.45■□□□□ 0.7
ARHGEF39-205ENST00000490638 LMOD2Q6P5Q4 547 aa19.45■□□□□ 0.7
ARHGEF39-205ENST00000490638 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
ARHGEF39-205ENST00000490638 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
ARHGEF39-205ENST00000490638 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
ARHGEF39-205ENST00000490638 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF39-205ENST00000490638 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF39-205ENST00000490638 FAM69CQ0P6D2 419 aa19.43■□□□□ 0.7
ARHGEF39-205ENST00000490638 NUP155O75694 1391 aa19.42■□□□□ 0.7
ARHGEF39-205ENST00000490638 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
ARHGEF39-205ENST00000490638 FOXD1Q16676 465 aa19.41■□□□□ 0.7
ARHGEF39-205ENST00000490638 WASHC2CQ9Y4E1 1318 aa19.38■□□□□ 0.69
ARHGEF39-205ENST00000490638 SETD5Q9C0A6 1442 aa19.37■□□□□ 0.69
ARHGEF39-205ENST00000490638 TOPBP1Q92547 1522 aa19.37■□□□□ 0.69
ARHGEF39-205ENST00000490638 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF39-205ENST00000490638 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
ARHGEF39-205ENST00000490638 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
ARHGEF39-205ENST00000490638 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
ARHGEF39-205ENST00000490638 MPHOSPH9Q99550 1183 aa19.33■□□□□ 0.69
ARHGEF39-205ENST00000490638 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF39-205ENST00000490638 STK26Q9P289 416 aa19.32■□□□□ 0.68
ARHGEF39-205ENST00000490638 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
ARHGEF39-205ENST00000490638 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF39-205ENST00000490638 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
ARHGEF39-205ENST00000490638 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
ARHGEF39-205ENST00000490638 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
ARHGEF39-205ENST00000490638 TIMELESSQ9UNS1 1208 aa19.23■□□□□ 0.67
ARHGEF39-205ENST00000490638 TMF1P82094 1093 aa19.22■□□□□ 0.67
ARHGEF39-205ENST00000490638 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
ARHGEF39-205ENST00000490638 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
ARHGEF39-205ENST00000490638 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
ARHGEF39-205ENST00000490638 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms