RNA–Protein interactions for RNA: ENST00000490553.1

RNF149-206, Transcript of ring finger protein 149, humanhuman

TSL 4

Gene RNF149, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-206ENST00000490553 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
RNF149-206ENST00000490553 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
RNF149-206ENST00000490553 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
RNF149-206ENST00000490553 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
RNF149-206ENST00000490553 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
RNF149-206ENST00000490553 ABCA5Q8WWZ7 1642 aa11.6□□□□□ -0.55
RNF149-206ENST00000490553 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
RNF149-206ENST00000490553 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
RNF149-206ENST00000490553 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
RNF149-206ENST00000490553 NUP160Q12769 1436 aa11.52□□□□□ -0.56
RNF149-206ENST00000490553 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
RNF149-206ENST00000490553 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
RNF149-206ENST00000490553 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
RNF149-206ENST00000490553 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
RNF149-206ENST00000490553 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
RNF149-206ENST00000490553 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
RNF149-206ENST00000490553 ERICH3Q5RHP9 1530 aa11.49□□□□□ -0.57
RNF149-206ENST00000490553 ERCC6L2Q5T890 1561 aa11.48□□□□□ -0.57
RNF149-206ENST00000490553 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
RNF149-206ENST00000490553 ZBTB22O15209 634 aa11.45□□□□□ -0.58
RNF149-206ENST00000490553 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
RNF149-206ENST00000490553 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
RNF149-206ENST00000490553 KIF13AQ9H1H9 1805 aa11.41□□□□□ -0.58
RNF149-206ENST00000490553 PRG4Q92954 1404 aaPredicted RBP11.4□□□□□ -0.58
RNF149-206ENST00000490553 MAPKBP1O60336 1514 aa11.35□□□□□ -0.59
RNF149-206ENST00000490553 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
RNF149-206ENST00000490553 ABCC10Q5T3U5 1492 aa11.34□□□□□ -0.59
RNF149-206ENST00000490553 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
RNF149-206ENST00000490553 KIAA0586Q9BVV6 1533 aa11.31□□□□□ -0.6
RNF149-206ENST00000490553 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
RNF149-206ENST00000490553 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
RNF149-206ENST00000490553 CUL7Q14999 1698 aa11.29□□□□□ -0.6
RNF149-206ENST00000490553 IGF1RP08069 1367 aa11.28□□□□□ -0.6
RNF149-206ENST00000490553 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
RNF149-206ENST00000490553 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
RNF149-206ENST00000490553 KIF27Q86VH2 1401 aa11.27□□□□□ -0.6
RNF149-206ENST00000490553 KDM6BO15054 1643 aa11.22□□□□□ -0.61
RNF149-206ENST00000490553 PTPRGP23470 1445 aa11.21□□□□□ -0.61
RNF149-206ENST00000490553 CARMIL2Q6F5E8 1435 aa11.2□□□□□ -0.62
RNF149-206ENST00000490553 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
RNF149-206ENST00000490553 TSPOAP1O95153 1857 aa11.2□□□□□ -0.62
RNF149-206ENST00000490553 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
RNF149-206ENST00000490553 GLI2P10070 1586 aa11.18□□□□□ -0.62
RNF149-206ENST00000490553 ABCC2Q92887 1545 aa11.18□□□□□ -0.62
RNF149-206ENST00000490553 UHRF1BP1LA0JNW5 1464 aa11.18□□□□□ -0.62
RNF149-206ENST00000490553 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
RNF149-206ENST00000490553 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
RNF149-206ENST00000490553 PLB1Q6P1J6 1458 aa11.17□□□□□ -0.62
RNF149-206ENST00000490553 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
RNF149-206ENST00000490553 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
RNF149-206ENST00000490553 ASXL2Q76L83 1435 aa11.14□□□□□ -0.63
RNF149-206ENST00000490553 UACAQ9BZF9 1416 aa11.13□□□□□ -0.63
RNF149-206ENST00000490553 PPRC1Q5VV67 1664 aaKnown RBP11.13□□□□□ -0.63
RNF149-206ENST00000490553 DISP1Q96F81 1524 aa11.12□□□□□ -0.63
RNF149-206ENST00000490553 KDM5BQ9UGL1 1544 aa11.11□□□□□ -0.63
RNF149-206ENST00000490553 UGGT2Q9NYU1 1516 aa11.1□□□□□ -0.63
RNF149-206ENST00000490553 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
RNF149-206ENST00000490553 RAPGEF2Q9Y4G8 1499 aa11.09□□□□□ -0.63
RNF149-206ENST00000490553 EPRSP07814 1512 aaKnown RBP11.08□□□□□ -0.64
RNF149-206ENST00000490553 TTBK1Q5TCY1 1321 aaPredicted RBP11.08□□□□□ -0.64
RNF149-206ENST00000490553 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
RNF149-206ENST00000490553 ZCCHC11Q5TAX3 1644 aaKnown RBP11.06□□□□□ -0.64
RNF149-206ENST00000490553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNF149-206ENST00000490553 KIAA0556O60303 1618 aa11.05□□□□□ -0.64
RNF149-206ENST00000490553 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
RNF149-206ENST00000490553 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
RNF149-206ENST00000490553 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
RNF149-206ENST00000490553 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.64
RNF149-206ENST00000490553 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
RNF149-206ENST00000490553 WDR7Q9Y4E6 1490 aa11.01□□□□□ -0.65
RNF149-206ENST00000490553 CFAP43Q8NDM7 1665 aa11□□□□□ -0.65
RNF149-206ENST00000490553 MAGI3Q5TCQ9 1506 aa10.99□□□□□ -0.65
RNF149-206ENST00000490553 ABCA8O94911 1581 aa10.98□□□□□ -0.65
RNF149-206ENST00000490553 CD109Q6YHK3 1445 aa10.97□□□□□ -0.65
RNF149-206ENST00000490553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
RNF149-206ENST00000490553 HNRNPUL2Q1KMD3 747 aaKnown RBP10.95□□□□□ -0.66
RNF149-206ENST00000490553 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
RNF149-206ENST00000490553 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
RNF149-206ENST00000490553 PRXQ9BXM0 1461 aa10.94□□□□□ -0.66
RNF149-206ENST00000490553 U3KPZ7 1027 aaPredicted RBP10.94□□□□□ -0.66
RNF149-206ENST00000490553 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
RNF149-206ENST00000490553 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
RNF149-206ENST00000490553 PHLDB1Q86UU1 1377 aa10.92□□□□□ -0.66
RNF149-206ENST00000490553 ARAP3Q8WWN8 1544 aa10.92□□□□□ -0.66
RNF149-206ENST00000490553 SAMD1Q6SPF0 538 aaPredicted RBP10.91□□□□□ -0.66
RNF149-206ENST00000490553 ATP10BO94823 1461 aa10.88□□□□□ -0.67
RNF149-206ENST00000490553 ABCA9Q8IUA7 1624 aa10.87□□□□□ -0.67
RNF149-206ENST00000490553 POTEDQ86YR6 584 aa10.86□□□□□ -0.67
RNF149-206ENST00000490553 KIF21BO75037 1637 aa10.85□□□□□ -0.67
RNF149-206ENST00000490553 NEO1Q92859 1461 aa10.84□□□□□ -0.67
RNF149-206ENST00000490553 SAMD9Q5K651 1589 aa10.84□□□□□ -0.67
RNF149-206ENST00000490553 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
RNF149-206ENST00000490553 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
RNF149-206ENST00000490553 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
RNF149-206ENST00000490553 PTPRMP28827 1452 aa10.8□□□□□ -0.68
RNF149-206ENST00000490553 APLP2Q06481 763 aa10.79□□□□□ -0.68
RNF149-206ENST00000490553 BCORL1Q5H9F3 1711 aa10.78□□□□□ -0.68
RNF149-206ENST00000490553 RAPGEF3O95398 923 aa10.78□□□□□ -0.68
RNF149-206ENST00000490553 EEA1Q15075 1411 aa10.77□□□□□ -0.68
RNF149-206ENST00000490553 NUP153P49790 1475 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms