RNA–Protein interactions for RNA: ENST00000490499.5

BPIFA3-204, Transcript of BPI fold containing family A member 3, humanhuman

TSL 1 (best)

Gene BPIFA3, Length 2,443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3-204ENST00000490499 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
BPIFA3-204ENST00000490499 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
BPIFA3-204ENST00000490499 CUL7Q14999 1698 aa12.15□□□□□ -0.46
BPIFA3-204ENST00000490499 CTTNBP2Q8WZ74 1663 aa12.15□□□□□ -0.46
BPIFA3-204ENST00000490499 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
BPIFA3-204ENST00000490499 P3H3Q8IVL6 736 aa12.15□□□□□ -0.47
BPIFA3-204ENST00000490499 PCF11O94913 1555 aaKnown RBP12.14□□□□□ -0.47
BPIFA3-204ENST00000490499 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
BPIFA3-204ENST00000490499 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
BPIFA3-204ENST00000490499 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
BPIFA3-204ENST00000490499 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
BPIFA3-204ENST00000490499 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
BPIFA3-204ENST00000490499 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
BPIFA3-204ENST00000490499 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
BPIFA3-204ENST00000490499 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
BPIFA3-204ENST00000490499 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
BPIFA3-204ENST00000490499 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
BPIFA3-204ENST00000490499 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
BPIFA3-204ENST00000490499 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
BPIFA3-204ENST00000490499 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.48
BPIFA3-204ENST00000490499 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
BPIFA3-204ENST00000490499 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
BPIFA3-204ENST00000490499 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
BPIFA3-204ENST00000490499 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
BPIFA3-204ENST00000490499 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
BPIFA3-204ENST00000490499 SAMD9Q5K651 1589 aa12.03□□□□□ -0.48
BPIFA3-204ENST00000490499 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
BPIFA3-204ENST00000490499 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
BPIFA3-204ENST00000490499 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
BPIFA3-204ENST00000490499 ZNF608Q9ULD9 1512 aaPredicted RBP12.02□□□□□ -0.48
BPIFA3-204ENST00000490499 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
BPIFA3-204ENST00000490499 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
BPIFA3-204ENST00000490499 MYT1Q01538 1121 aa12.01□□□□□ -0.49
BPIFA3-204ENST00000490499 DHX57Q6P158 1386 aaKnown RBP12□□□□□ -0.49
BPIFA3-204ENST00000490499 NEUROD1Q13562 356 aa12□□□□□ -0.49
BPIFA3-204ENST00000490499 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
BPIFA3-204ENST00000490499 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
BPIFA3-204ENST00000490499 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 ITGAEP38570 1179 aa11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 CASKIN1Q8WXD9 1431 aa11.99□□□□□ -0.49
BPIFA3-204ENST00000490499 WDR62O43379 1518 aa11.98□□□□□ -0.49
BPIFA3-204ENST00000490499 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
BPIFA3-204ENST00000490499 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
BPIFA3-204ENST00000490499 MAGI3Q5TCQ9 1506 aa11.93□□□□□ -0.5
BPIFA3-204ENST00000490499 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
BPIFA3-204ENST00000490499 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
BPIFA3-204ENST00000490499 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
BPIFA3-204ENST00000490499 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
BPIFA3-204ENST00000490499 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
BPIFA3-204ENST00000490499 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.5
BPIFA3-204ENST00000490499 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
BPIFA3-204ENST00000490499 MIER1Q8N108 512 aa11.89□□□□□ -0.51
BPIFA3-204ENST00000490499 FAM50AQ14320 339 aaKnown RBP11.88□□□□□ -0.51
BPIFA3-204ENST00000490499 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
BPIFA3-204ENST00000490499 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
BPIFA3-204ENST00000490499 CDK13Q14004 1512 aaKnown RBP11.85□□□□□ -0.51
BPIFA3-204ENST00000490499 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
BPIFA3-204ENST00000490499 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
BPIFA3-204ENST00000490499 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
BPIFA3-204ENST00000490499 DISP1Q96F81 1524 aa11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 UGGT2Q9NYU1 1516 aa11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
BPIFA3-204ENST00000490499 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
BPIFA3-204ENST00000490499 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
BPIFA3-204ENST00000490499 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
BPIFA3-204ENST00000490499 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
BPIFA3-204ENST00000490499 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
BPIFA3-204ENST00000490499 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
BPIFA3-204ENST00000490499 HECW1Q76N89 1606 aa11.81□□□□□ -0.52
BPIFA3-204ENST00000490499 EPRSP07814 1512 aaKnown RBP11.8□□□□□ -0.52
BPIFA3-204ENST00000490499 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
BPIFA3-204ENST00000490499 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
BPIFA3-204ENST00000490499 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
BPIFA3-204ENST00000490499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.52
BPIFA3-204ENST00000490499 SIN3AQ96ST3 1273 aa11.77□□□□□ -0.53
BPIFA3-204ENST00000490499 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
BPIFA3-204ENST00000490499 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
BPIFA3-204ENST00000490499 ADRA2BP18089 450 aa11.75□□□□□ -0.53
BPIFA3-204ENST00000490499 NUP153P49790 1475 aaKnown RBP11.75□□□□□ -0.53
BPIFA3-204ENST00000490499 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
BPIFA3-204ENST00000490499 KDM6BO15054 1643 aa11.74□□□□□ -0.53
BPIFA3-204ENST00000490499 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
BPIFA3-204ENST00000490499 FBLN2P98095 1184 aa11.71□□□□□ -0.53
BPIFA3-204ENST00000490499 NAIPQ13075 1403 aa11.71□□□□□ -0.53
BPIFA3-204ENST00000490499 TCOF1Q13428 1488 aaKnown RBP11.71□□□□□ -0.53
BPIFA3-204ENST00000490499 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.54
BPIFA3-204ENST00000490499 PLB1Q6P1J6 1458 aa11.71□□□□□ -0.54
BPIFA3-204ENST00000490499 HFM1A2PYH4 1435 aa11.7□□□□□ -0.54
BPIFA3-204ENST00000490499 NUP160Q12769 1436 aa11.7□□□□□ -0.54
BPIFA3-204ENST00000490499 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
BPIFA3-204ENST00000490499 DENND4BO75064 1496 aaPredicted RBP11.68□□□□□ -0.54
BPIFA3-204ENST00000490499 GCC2Q8IWJ2 1684 aa11.67□□□□□ -0.54
BPIFA3-204ENST00000490499 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
BPIFA3-204ENST00000490499 KIF14Q15058 1648 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms