RNA–Protein interactions for RNA: ENST00000490363.3

KCNT1-210, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 5

Gene KCNT1, Length 4,065 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-210ENST00000490363 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
KCNT1-210ENST00000490363 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
KCNT1-210ENST00000490363 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
KCNT1-210ENST00000490363 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
KCNT1-210ENST00000490363 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
KCNT1-210ENST00000490363 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
KCNT1-210ENST00000490363 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
KCNT1-210ENST00000490363 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
KCNT1-210ENST00000490363 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
KCNT1-210ENST00000490363 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
KCNT1-210ENST00000490363 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
KCNT1-210ENST00000490363 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
KCNT1-210ENST00000490363 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
KCNT1-210ENST00000490363 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
KCNT1-210ENST00000490363 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
KCNT1-210ENST00000490363 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
KCNT1-210ENST00000490363 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
KCNT1-210ENST00000490363 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
KCNT1-210ENST00000490363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
KCNT1-210ENST00000490363 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
KCNT1-210ENST00000490363 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
KCNT1-210ENST00000490363 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
KCNT1-210ENST00000490363 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
KCNT1-210ENST00000490363 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
KCNT1-210ENST00000490363 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
KCNT1-210ENST00000490363 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
KCNT1-210ENST00000490363 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
KCNT1-210ENST00000490363 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
KCNT1-210ENST00000490363 OSCARQ8IYS5 282 aa18.57■□□□□ 0.56
KCNT1-210ENST00000490363 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
KCNT1-210ENST00000490363 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
KCNT1-210ENST00000490363 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
KCNT1-210ENST00000490363 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
KCNT1-210ENST00000490363 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
KCNT1-210ENST00000490363 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.55
KCNT1-210ENST00000490363 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
KCNT1-210ENST00000490363 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
KCNT1-210ENST00000490363 PTPRGP23470 1445 aa18.47■□□□□ 0.55
KCNT1-210ENST00000490363 KIF21BO75037 1637 aa18.45■□□□□ 0.54
KCNT1-210ENST00000490363 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
KCNT1-210ENST00000490363 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
KCNT1-210ENST00000490363 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
KCNT1-210ENST00000490363 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
KCNT1-210ENST00000490363 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
KCNT1-210ENST00000490363 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
KCNT1-210ENST00000490363 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
KCNT1-210ENST00000490363 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
KCNT1-210ENST00000490363 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
KCNT1-210ENST00000490363 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
KCNT1-210ENST00000490363 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
KCNT1-210ENST00000490363 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
KCNT1-210ENST00000490363 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
KCNT1-210ENST00000490363 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
KCNT1-210ENST00000490363 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.52
KCNT1-210ENST00000490363 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
KCNT1-210ENST00000490363 FOXD1Q16676 465 aa18.32■□□□□ 0.52
KCNT1-210ENST00000490363 BCANQ96GW7 911 aa18.31■□□□□ 0.52
KCNT1-210ENST00000490363 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
KCNT1-210ENST00000490363 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
KCNT1-210ENST00000490363 PHLDB1Q86UU1 1377 aa18.25■□□□□ 0.51
KCNT1-210ENST00000490363 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
KCNT1-210ENST00000490363 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
KCNT1-210ENST00000490363 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
KCNT1-210ENST00000490363 SYNJ2O15056 1496 aa18.23■□□□□ 0.51
KCNT1-210ENST00000490363 MLECQ14165 292 aa18.23■□□□□ 0.51
KCNT1-210ENST00000490363 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
KCNT1-210ENST00000490363 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
KCNT1-210ENST00000490363 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
KCNT1-210ENST00000490363 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
KCNT1-210ENST00000490363 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
KCNT1-210ENST00000490363 GGT6Q6P531 493 aa18.19■□□□□ 0.5
KCNT1-210ENST00000490363 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
KCNT1-210ENST00000490363 NEFLP07196 543 aa18.17■□□□□ 0.5
KCNT1-210ENST00000490363 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
KCNT1-210ENST00000490363 SETD5Q9C0A6 1442 aa18.16■□□□□ 0.5
KCNT1-210ENST00000490363 LRRC9Q6ZRR7 1453 aa18.16■□□□□ 0.5
KCNT1-210ENST00000490363 MIER1Q8N108 512 aa18.15■□□□□ 0.5
KCNT1-210ENST00000490363 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
KCNT1-210ENST00000490363 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
KCNT1-210ENST00000490363 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
KCNT1-210ENST00000490363 CUL7Q14999 1698 aa18.11■□□□□ 0.49
KCNT1-210ENST00000490363 PKD2Q13563 968 aa18.1■□□□□ 0.49
KCNT1-210ENST00000490363 FAM69CQ0P6D2 419 aa18.1■□□□□ 0.49
KCNT1-210ENST00000490363 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
KCNT1-210ENST00000490363 WDR62O43379 1518 aa18.09■□□□□ 0.49
KCNT1-210ENST00000490363 KIF3BO15066 747 aa18.08■□□□□ 0.49
KCNT1-210ENST00000490363 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
KCNT1-210ENST00000490363 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
KCNT1-210ENST00000490363 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
KCNT1-210ENST00000490363 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
KCNT1-210ENST00000490363 EFCAB5A4FU69 1503 aa18.06■□□□□ 0.48
KCNT1-210ENST00000490363 NUP155O75694 1391 aa18.05■□□□□ 0.48
KCNT1-210ENST00000490363 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
KCNT1-210ENST00000490363 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
KCNT1-210ENST00000490363 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
KCNT1-210ENST00000490363 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.48
KCNT1-210ENST00000490363 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.48
KCNT1-210ENST00000490363 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
KCNT1-210ENST00000490363 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
KCNT1-210ENST00000490363 PCF11O94913 1555 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms