RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
ECM1-205ENST00000490346 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
ECM1-205ENST00000490346 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
ECM1-205ENST00000490346 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
ECM1-205ENST00000490346 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
ECM1-205ENST00000490346 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
ECM1-205ENST00000490346 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
ECM1-205ENST00000490346 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
ECM1-205ENST00000490346 PRG4Q92954 1404 aaPredicted RBP15.28■□□□□ 0.04
ECM1-205ENST00000490346 IQGAP2Q13576 1575 aa15.27■□□□□ 0.03
ECM1-205ENST00000490346 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
ECM1-205ENST00000490346 KIF21BO75037 1637 aa15.21■□□□□ 0.03
ECM1-205ENST00000490346 UGGT2Q9NYU1 1516 aa15.18■□□□□ 0.02
ECM1-205ENST00000490346 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
ECM1-205ENST00000490346 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
ECM1-205ENST00000490346 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
ECM1-205ENST00000490346 KIAA0556O60303 1618 aa15.13■□□□□ 0.01
ECM1-205ENST00000490346 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
ECM1-205ENST00000490346 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
ECM1-205ENST00000490346 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
ECM1-205ENST00000490346 PTPRGP23470 1445 aa15.11■□□□□ 0.01
ECM1-205ENST00000490346 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
ECM1-205ENST00000490346 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
ECM1-205ENST00000490346 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
ECM1-205ENST00000490346 SAMD9Q5K651 1589 aa15.04■□□□□ -0
ECM1-205ENST00000490346 P3H3Q8IVL6 736 aa15.04■□□□□ -0
ECM1-205ENST00000490346 UACAQ9BZF9 1416 aa15□□□□□ -0.01
ECM1-205ENST00000490346 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
ECM1-205ENST00000490346 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
ECM1-205ENST00000490346 ABCC2Q92887 1545 aa14.98□□□□□ -0.01
ECM1-205ENST00000490346 UHRF1BP1LA0JNW5 1464 aa14.98□□□□□ -0.01
ECM1-205ENST00000490346 PLB1Q6P1J6 1458 aa14.98□□□□□ -0.01
ECM1-205ENST00000490346 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
ECM1-205ENST00000490346 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
ECM1-205ENST00000490346 ABCA8O94911 1581 aa14.96□□□□□ -0.01
ECM1-205ENST00000490346 MAPKBP1O60336 1514 aa14.93□□□□□ -0.02
ECM1-205ENST00000490346 ARHGAP35Q9NRY4 1499 aa14.93□□□□□ -0.02
ECM1-205ENST00000490346 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
ECM1-205ENST00000490346 ZCCHC11Q5TAX3 1644 aaKnown RBP14.91□□□□□ -0.02
ECM1-205ENST00000490346 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
ECM1-205ENST00000490346 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
ECM1-205ENST00000490346 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
ECM1-205ENST00000490346 ASXL2Q76L83 1435 aa14.87□□□□□ -0.03
ECM1-205ENST00000490346 KIF13AQ9H1H9 1805 aa14.86□□□□□ -0.03
ECM1-205ENST00000490346 CLIP1P30622 1438 aa14.85□□□□□ -0.03
ECM1-205ENST00000490346 ABCC10Q5T3U5 1492 aa14.85□□□□□ -0.03
ECM1-205ENST00000490346 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
ECM1-205ENST00000490346 ATP10BO94823 1461 aa14.84□□□□□ -0.03
ECM1-205ENST00000490346 NUP153P49790 1475 aaKnown RBP14.84□□□□□ -0.03
ECM1-205ENST00000490346 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
ECM1-205ENST00000490346 FAM69CQ0P6D2 419 aa14.83□□□□□ -0.04
ECM1-205ENST00000490346 CEP162Q5TB80 1403 aa14.81□□□□□ -0.04
ECM1-205ENST00000490346 WDR7Q9Y4E6 1490 aa14.8□□□□□ -0.04
ECM1-205ENST00000490346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
ECM1-205ENST00000490346 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
ECM1-205ENST00000490346 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
ECM1-205ENST00000490346 HECW1Q76N89 1606 aa14.77□□□□□ -0.04
ECM1-205ENST00000490346 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
ECM1-205ENST00000490346 PCF11O94913 1555 aaKnown RBP14.76□□□□□ -0.05
ECM1-205ENST00000490346 GLI2P10070 1586 aa14.76□□□□□ -0.05
ECM1-205ENST00000490346 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
ECM1-205ENST00000490346 KCNH8Q96L42 1107 aa14.75□□□□□ -0.05
ECM1-205ENST00000490346 CASKIN1Q8WXD9 1431 aa14.74□□□□□ -0.05
ECM1-205ENST00000490346 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
ECM1-205ENST00000490346 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
ECM1-205ENST00000490346 MAP3K4Q9Y6R4 1608 aa14.71□□□□□ -0.05
ECM1-205ENST00000490346 FYCO1Q9BQS8 1478 aa14.7□□□□□ -0.06
ECM1-205ENST00000490346 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
ECM1-205ENST00000490346 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
ECM1-205ENST00000490346 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
ECM1-205ENST00000490346 CFAP43Q8NDM7 1665 aa14.67□□□□□ -0.06
ECM1-205ENST00000490346 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
ECM1-205ENST00000490346 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
ECM1-205ENST00000490346 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
ECM1-205ENST00000490346 TEX14Q8IWB6 1497 aa14.63□□□□□ -0.07
ECM1-205ENST00000490346 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
ECM1-205ENST00000490346 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
ECM1-205ENST00000490346 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
ECM1-205ENST00000490346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
ECM1-205ENST00000490346 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
ECM1-205ENST00000490346 KDM6BO15054 1643 aa14.6□□□□□ -0.07
ECM1-205ENST00000490346 KIF14Q15058 1648 aa14.6□□□□□ -0.07
ECM1-205ENST00000490346 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
ECM1-205ENST00000490346 MYO5CQ9NQX4 1742 aa14.53□□□□□ -0.08
ECM1-205ENST00000490346 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
ECM1-205ENST00000490346 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
ECM1-205ENST00000490346 FANCAO15360 1455 aa14.51□□□□□ -0.09
ECM1-205ENST00000490346 NEO1Q92859 1461 aa14.51□□□□□ -0.09
ECM1-205ENST00000490346 PLCH2O75038 1416 aa14.51□□□□□ -0.09
ECM1-205ENST00000490346 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
ECM1-205ENST00000490346 CFAP74Q9C0B2 1584 aa14.5□□□□□ -0.09
ECM1-205ENST00000490346 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
ECM1-205ENST00000490346 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
ECM1-205ENST00000490346 AKNAQ7Z591 1439 aa14.48□□□□□ -0.09
ECM1-205ENST00000490346 ARHGAP5Q13017 1502 aa14.47□□□□□ -0.09
ECM1-205ENST00000490346 MAP3K1Q13233 1512 aa14.47□□□□□ -0.09
ECM1-205ENST00000490346 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
ECM1-205ENST00000490346 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.09
ECM1-205ENST00000490346 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.09
ECM1-205ENST00000490346 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms