RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
HDAC1-210ENST00000490081 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
HDAC1-210ENST00000490081 KIF21BO75037 1637 aa20.6■□□□□ 0.89
HDAC1-210ENST00000490081 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
HDAC1-210ENST00000490081 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
HDAC1-210ENST00000490081 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
HDAC1-210ENST00000490081 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
HDAC1-210ENST00000490081 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
HDAC1-210ENST00000490081 SHROOM2Q13796 1616 aa20.45■□□□□ 0.86
HDAC1-210ENST00000490081 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
HDAC1-210ENST00000490081 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
HDAC1-210ENST00000490081 IQGAP2Q13576 1575 aa20.42■□□□□ 0.86
HDAC1-210ENST00000490081 UGGT2Q9NYU1 1516 aa20.36■□□□□ 0.85
HDAC1-210ENST00000490081 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
HDAC1-210ENST00000490081 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
HDAC1-210ENST00000490081 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
HDAC1-210ENST00000490081 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
HDAC1-210ENST00000490081 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
HDAC1-210ENST00000490081 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
HDAC1-210ENST00000490081 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
HDAC1-210ENST00000490081 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
HDAC1-210ENST00000490081 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
HDAC1-210ENST00000490081 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
HDAC1-210ENST00000490081 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
HDAC1-210ENST00000490081 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
HDAC1-210ENST00000490081 PTPRGP23470 1445 aa20.13■□□□□ 0.81
HDAC1-210ENST00000490081 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
HDAC1-210ENST00000490081 CLIP1P30622 1438 aa20.1■□□□□ 0.81
HDAC1-210ENST00000490081 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
HDAC1-210ENST00000490081 UHRF1BP1LA0JNW5 1464 aa20.04■□□□□ 0.8
HDAC1-210ENST00000490081 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
HDAC1-210ENST00000490081 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
HDAC1-210ENST00000490081 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.79
HDAC1-210ENST00000490081 FMN1Q68DA7 1419 aa20.02■□□□□ 0.79
HDAC1-210ENST00000490081 UACAQ9BZF9 1416 aa20.02■□□□□ 0.79
HDAC1-210ENST00000490081 ABCA8O94911 1581 aa20■□□□□ 0.79
HDAC1-210ENST00000490081 ABCC2Q92887 1545 aa19.97■□□□□ 0.79
HDAC1-210ENST00000490081 ADCY10Q96PN6 1610 aa19.94■□□□□ 0.78
HDAC1-210ENST00000490081 PLB1Q6P1J6 1458 aa19.94■□□□□ 0.78
HDAC1-210ENST00000490081 KIF13AQ9H1H9 1805 aa19.94■□□□□ 0.78
HDAC1-210ENST00000490081 RAPGEF6Q8TEU7 1601 aa19.93■□□□□ 0.78
HDAC1-210ENST00000490081 KDM5BQ9UGL1 1544 aa19.92■□□□□ 0.78
HDAC1-210ENST00000490081 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
HDAC1-210ENST00000490081 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
HDAC1-210ENST00000490081 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
HDAC1-210ENST00000490081 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
HDAC1-210ENST00000490081 NUP153P49790 1475 aaKnown RBP19.86■□□□□ 0.77
HDAC1-210ENST00000490081 ABCC10Q5T3U5 1492 aa19.85■□□□□ 0.77
HDAC1-210ENST00000490081 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
HDAC1-210ENST00000490081 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
HDAC1-210ENST00000490081 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
HDAC1-210ENST00000490081 ATP10BO94823 1461 aa19.83■□□□□ 0.76
HDAC1-210ENST00000490081 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
HDAC1-210ENST00000490081 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
HDAC1-210ENST00000490081 DIP2BQ9P265 1576 aa19.8■□□□□ 0.76
HDAC1-210ENST00000490081 EPRSP07814 1512 aaKnown RBP19.79■□□□□ 0.76
HDAC1-210ENST00000490081 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
HDAC1-210ENST00000490081 FAM69CQ0P6D2 419 aa19.77■□□□□ 0.76
HDAC1-210ENST00000490081 LRRIQ1Q96JM4 1722 aa19.75■□□□□ 0.75
HDAC1-210ENST00000490081 MAP3K1Q13233 1512 aa19.74■□□□□ 0.75
HDAC1-210ENST00000490081 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
HDAC1-210ENST00000490081 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
HDAC1-210ENST00000490081 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
HDAC1-210ENST00000490081 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-210ENST00000490081 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
HDAC1-210ENST00000490081 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
HDAC1-210ENST00000490081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
HDAC1-210ENST00000490081 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
HDAC1-210ENST00000490081 GLI2P10070 1586 aa19.65■□□□□ 0.74
HDAC1-210ENST00000490081 CFAP43Q8NDM7 1665 aa19.63■□□□□ 0.73
HDAC1-210ENST00000490081 TIAM1Q13009 1591 aa19.63■□□□□ 0.73
HDAC1-210ENST00000490081 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
HDAC1-210ENST00000490081 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
HDAC1-210ENST00000490081 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
HDAC1-210ENST00000490081 APLP2Q06481 763 aa19.59■□□□□ 0.73
HDAC1-210ENST00000490081 KDM6BO15054 1643 aa19.58■□□□□ 0.72
HDAC1-210ENST00000490081 MAGI3Q5TCQ9 1506 aa19.57■□□□□ 0.72
HDAC1-210ENST00000490081 PPRC1Q5VV67 1664 aaKnown RBP19.57■□□□□ 0.72
HDAC1-210ENST00000490081 ABCA9Q8IUA7 1624 aa19.56■□□□□ 0.72
HDAC1-210ENST00000490081 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
HDAC1-210ENST00000490081 EHBP1L1Q8N3D4 1523 aa19.55■□□□□ 0.72
HDAC1-210ENST00000490081 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
HDAC1-210ENST00000490081 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
HDAC1-210ENST00000490081 KIF14Q15058 1648 aa19.52■□□□□ 0.72
HDAC1-210ENST00000490081 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
HDAC1-210ENST00000490081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDAC1-210ENST00000490081 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
HDAC1-210ENST00000490081 CD109Q6YHK3 1445 aa19.48■□□□□ 0.71
HDAC1-210ENST00000490081 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
HDAC1-210ENST00000490081 ARAP3Q8WWN8 1544 aa19.47■□□□□ 0.71
HDAC1-210ENST00000490081 PLCH2O75038 1416 aa19.44■□□□□ 0.7
HDAC1-210ENST00000490081 TTC37Q6PGP7 1564 aa19.44■□□□□ 0.7
HDAC1-210ENST00000490081 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
HDAC1-210ENST00000490081 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
HDAC1-210ENST00000490081 NCOA2Q15596 1464 aa19.42■□□□□ 0.7
HDAC1-210ENST00000490081 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
HDAC1-210ENST00000490081 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
HDAC1-210ENST00000490081 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
HDAC1-210ENST00000490081 GPATCH8Q9UKJ3 1502 aaKnown RBP19.4■□□□□ 0.7
HDAC1-210ENST00000490081 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms