RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
COMMD2-206ENST00000490008 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
COMMD2-206ENST00000490008 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.32
COMMD2-206ENST00000490008 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.32
COMMD2-206ENST00000490008 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
COMMD2-206ENST00000490008 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
COMMD2-206ENST00000490008 GOLGA3Q08378 1498 aa23.22■■□□□ 1.31
COMMD2-206ENST00000490008 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
COMMD2-206ENST00000490008 KIF21BO75037 1637 aa23.2■■□□□ 1.3
COMMD2-206ENST00000490008 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
COMMD2-206ENST00000490008 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
COMMD2-206ENST00000490008 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
COMMD2-206ENST00000490008 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
COMMD2-206ENST00000490008 RIMBP3CA6NJZ7 1639 aa23.14■■□□□ 1.29
COMMD2-206ENST00000490008 RIMBP3BA6NNM3 1639 aa23.14■■□□□ 1.29
COMMD2-206ENST00000490008 RIMBP3Q9UFD9 1639 aa23.14■■□□□ 1.29
COMMD2-206ENST00000490008 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
COMMD2-206ENST00000490008 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
COMMD2-206ENST00000490008 PTPRGP23470 1445 aa23.08■■□□□ 1.28
COMMD2-206ENST00000490008 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
COMMD2-206ENST00000490008 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
COMMD2-206ENST00000490008 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
COMMD2-206ENST00000490008 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
COMMD2-206ENST00000490008 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
COMMD2-206ENST00000490008 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
COMMD2-206ENST00000490008 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
COMMD2-206ENST00000490008 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
COMMD2-206ENST00000490008 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
COMMD2-206ENST00000490008 CLIP1P30622 1438 aa22.86■■□□□ 1.25
COMMD2-206ENST00000490008 FHOD3Q2V2M9 1422 aa22.86■■□□□ 1.25
COMMD2-206ENST00000490008 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
COMMD2-206ENST00000490008 EFCAB5A4FU69 1503 aa22.84■■□□□ 1.25
COMMD2-206ENST00000490008 SAMD9Q5K651 1589 aa22.81■■□□□ 1.24
COMMD2-206ENST00000490008 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
COMMD2-206ENST00000490008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
COMMD2-206ENST00000490008 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
COMMD2-206ENST00000490008 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
COMMD2-206ENST00000490008 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
COMMD2-206ENST00000490008 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
COMMD2-206ENST00000490008 PLB1Q6P1J6 1458 aa22.77■■□□□ 1.24
COMMD2-206ENST00000490008 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
COMMD2-206ENST00000490008 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
COMMD2-206ENST00000490008 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
COMMD2-206ENST00000490008 ADCY10Q96PN6 1610 aa22.68■■□□□ 1.22
COMMD2-206ENST00000490008 ABCA8O94911 1581 aa22.66■■□□□ 1.22
COMMD2-206ENST00000490008 PLEKHD1A6NEE1 506 aa22.64■■□□□ 1.21
COMMD2-206ENST00000490008 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
COMMD2-206ENST00000490008 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
COMMD2-206ENST00000490008 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
COMMD2-206ENST00000490008 FAM69CQ0P6D2 419 aa22.61■■□□□ 1.21
COMMD2-206ENST00000490008 ATP10BO94823 1461 aa22.6■■□□□ 1.21
COMMD2-206ENST00000490008 RAPGEF6Q8TEU7 1601 aa22.6■■□□□ 1.21
COMMD2-206ENST00000490008 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
COMMD2-206ENST00000490008 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
COMMD2-206ENST00000490008 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
COMMD2-206ENST00000490008 APLP2Q06481 763 aa22.54■■□□□ 1.2
COMMD2-206ENST00000490008 MAPKBP1O60336 1514 aa22.52■■□□□ 1.19
COMMD2-206ENST00000490008 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
COMMD2-206ENST00000490008 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
COMMD2-206ENST00000490008 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
COMMD2-206ENST00000490008 HECW1Q76N89 1606 aa22.48■■□□□ 1.19
COMMD2-206ENST00000490008 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
COMMD2-206ENST00000490008 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
COMMD2-206ENST00000490008 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
COMMD2-206ENST00000490008 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
COMMD2-206ENST00000490008 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
COMMD2-206ENST00000490008 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
COMMD2-206ENST00000490008 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
COMMD2-206ENST00000490008 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
COMMD2-206ENST00000490008 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
COMMD2-206ENST00000490008 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
COMMD2-206ENST00000490008 GLI2P10070 1586 aa22.29■■□□□ 1.16
COMMD2-206ENST00000490008 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
COMMD2-206ENST00000490008 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
COMMD2-206ENST00000490008 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
COMMD2-206ENST00000490008 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
COMMD2-206ENST00000490008 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
COMMD2-206ENST00000490008 TEX14Q8IWB6 1497 aa22.19■■□□□ 1.14
COMMD2-206ENST00000490008 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
COMMD2-206ENST00000490008 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
COMMD2-206ENST00000490008 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
COMMD2-206ENST00000490008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
COMMD2-206ENST00000490008 LRRC9Q6ZRR7 1453 aa22.17■■□□□ 1.14
COMMD2-206ENST00000490008 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
COMMD2-206ENST00000490008 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
COMMD2-206ENST00000490008 KIF14Q15058 1648 aa22.17■■□□□ 1.14
COMMD2-206ENST00000490008 PLCH2O75038 1416 aa22.16■■□□□ 1.14
COMMD2-206ENST00000490008 PPARGC1BQ86YN6 1023 aaKnown RBP22.16■■□□□ 1.14
COMMD2-206ENST00000490008 PHLDB1Q86UU1 1377 aa22.14■■□□□ 1.14
COMMD2-206ENST00000490008 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
COMMD2-206ENST00000490008 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.13
COMMD2-206ENST00000490008 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
COMMD2-206ENST00000490008 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
COMMD2-206ENST00000490008 EHBP1L1Q8N3D4 1523 aa22.13■■□□□ 1.13
COMMD2-206ENST00000490008 FANCAO15360 1455 aa22.08■■□□□ 1.12
COMMD2-206ENST00000490008 NCOA2Q15596 1464 aa22.08■■□□□ 1.12
COMMD2-206ENST00000490008 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.12
COMMD2-206ENST00000490008 AKNAQ7Z591 1439 aa22.07■■□□□ 1.12
COMMD2-206ENST00000490008 NEO1Q92859 1461 aa22.06■■□□□ 1.12
COMMD2-206ENST00000490008 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms