RNA–Protein interactions for RNA: ENST00000489941.6

LMO7-212, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-212ENST00000489941 MIER1Q8N108 512 aa10.05□□□□□ -0.8
LMO7-212ENST00000489941 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
LMO7-212ENST00000489941 WIZO95785 1651 aa10.04□□□□□ -0.8
LMO7-212ENST00000489941 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
LMO7-212ENST00000489941 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
LMO7-212ENST00000489941 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
LMO7-212ENST00000489941 SMARCA2P51531 1590 aa10.03□□□□□ -0.8
LMO7-212ENST00000489941 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
LMO7-212ENST00000489941 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
LMO7-212ENST00000489941 SUPT5HO00267 1087 aaKnown RBP10.01□□□□□ -0.81
LMO7-212ENST00000489941 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
LMO7-212ENST00000489941 PEG3Q9GZU2 1588 aa10.01□□□□□ -0.81
LMO7-212ENST00000489941 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
LMO7-212ENST00000489941 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
LMO7-212ENST00000489941 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
LMO7-212ENST00000489941 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
LMO7-212ENST00000489941 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
LMO7-212ENST00000489941 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
LMO7-212ENST00000489941 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
LMO7-212ENST00000489941 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
LMO7-212ENST00000489941 NCAPD3P42695 1498 aa9.88□□□□□ -0.83
LMO7-212ENST00000489941 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
LMO7-212ENST00000489941 CREBZFQ9NS37 354 aa9.82□□□□□ -0.84
LMO7-212ENST00000489941 CHADLQ6NUI6 762 aa9.8□□□□□ -0.84
LMO7-212ENST00000489941 CCDC88BA6NC98 1476 aa9.78□□□□□ -0.84
LMO7-212ENST00000489941 CIZ1Q9ULV3 898 aaPredicted RBP9.77□□□□□ -0.85
LMO7-212ENST00000489941 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
LMO7-212ENST00000489941 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
LMO7-212ENST00000489941 POTEMA6NI47 508 aa9.73□□□□□ -0.85
LMO7-212ENST00000489941 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
LMO7-212ENST00000489941 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
LMO7-212ENST00000489941 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
LMO7-212ENST00000489941 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
LMO7-212ENST00000489941 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
LMO7-212ENST00000489941 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
LMO7-212ENST00000489941 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
LMO7-212ENST00000489941 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
LMO7-212ENST00000489941 GSE1Q14687 1217 aa9.67□□□□□ -0.86
LMO7-212ENST00000489941 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
LMO7-212ENST00000489941 NUBP1P53384 320 aa9.66□□□□□ -0.86
LMO7-212ENST00000489941 PKD2Q13563 968 aa9.65□□□□□ -0.86
LMO7-212ENST00000489941 CFTRP13569 1480 aa9.65□□□□□ -0.87
LMO7-212ENST00000489941 NESP48681 1621 aa9.64□□□□□ -0.87
LMO7-212ENST00000489941 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
LMO7-212ENST00000489941 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
LMO7-212ENST00000489941 TSPYL2Q9H2G4 693 aaPredicted RBP9.62□□□□□ -0.87
LMO7-212ENST00000489941 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
LMO7-212ENST00000489941 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
LMO7-212ENST00000489941 KIF21AQ7Z4S6 1674 aa9.6□□□□□ -0.87
LMO7-212ENST00000489941 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
LMO7-212ENST00000489941 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
LMO7-212ENST00000489941 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
LMO7-212ENST00000489941 ABCC8Q09428 1581 aa9.59□□□□□ -0.87
LMO7-212ENST00000489941 TRIM41Q8WV44 630 aa9.58□□□□□ -0.88
LMO7-212ENST00000489941 DCBLD2Q96PD2 775 aa9.57□□□□□ -0.88
LMO7-212ENST00000489941 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
LMO7-212ENST00000489941 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
LMO7-212ENST00000489941 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
LMO7-212ENST00000489941 PYGBP11216 843 aa9.53□□□□□ -0.88
LMO7-212ENST00000489941 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
LMO7-212ENST00000489941 RGL2O15211 777 aa9.52□□□□□ -0.89
LMO7-212ENST00000489941 CLCN6P51797 869 aa9.52□□□□□ -0.89
LMO7-212ENST00000489941 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
LMO7-212ENST00000489941 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.89
LMO7-212ENST00000489941 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
LMO7-212ENST00000489941 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
LMO7-212ENST00000489941 BIVM-ERCC5R4GMW8 1640 aa9.5□□□□□ -0.89
LMO7-212ENST00000489941 CUX1P39880 1505 aa9.5□□□□□ -0.89
LMO7-212ENST00000489941 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
LMO7-212ENST00000489941 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
LMO7-212ENST00000489941 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
LMO7-212ENST00000489941 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
LMO7-212ENST00000489941 WDR62O43379 1518 aa9.47□□□□□ -0.89
LMO7-212ENST00000489941 POTEJP0CG39 1038 aa9.47□□□□□ -0.89
LMO7-212ENST00000489941 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.89
LMO7-212ENST00000489941 TOPBP1Q92547 1522 aa9.46□□□□□ -0.89
LMO7-212ENST00000489941 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
LMO7-212ENST00000489941 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
LMO7-212ENST00000489941 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
LMO7-212ENST00000489941 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
LMO7-212ENST00000489941 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
LMO7-212ENST00000489941 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
LMO7-212ENST00000489941 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
LMO7-212ENST00000489941 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.9
LMO7-212ENST00000489941 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
LMO7-212ENST00000489941 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
LMO7-212ENST00000489941 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
LMO7-212ENST00000489941 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
LMO7-212ENST00000489941 VGFO15240 615 aaPredicted RBP9.38□□□□□ -0.91
LMO7-212ENST00000489941 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
LMO7-212ENST00000489941 PCDHB8Q9UN66 801 aa9.37□□□□□ -0.91
LMO7-212ENST00000489941 MAP3K13O43283 966 aa9.36□□□□□ -0.91
LMO7-212ENST00000489941 STK25O00506 426 aa9.35□□□□□ -0.91
LMO7-212ENST00000489941 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
LMO7-212ENST00000489941 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
LMO7-212ENST00000489941 CUX2O14529 1486 aa9.34□□□□□ -0.91
LMO7-212ENST00000489941 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
LMO7-212ENST00000489941 EIF4G3O43432 1585 aaKnown RBP9.34□□□□□ -0.91
LMO7-212ENST00000489941 IFT140Q96RY7 1462 aa9.34□□□□□ -0.91
LMO7-212ENST00000489941 TARBP1Q13395 1621 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms