RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 CHIC1Q5VXU3 224 aa38.21■■■■□ 3.71
LSM10-203ENST00000489912 RAPGEF2Q9Y4G8 1499 aa38.21■■■■□ 3.71
LSM10-203ENST00000489912 JPH4Q96JJ6 628 aa38.2■■■■□ 3.71
LSM10-203ENST00000489912 KIAA0586Q9BVV6 1533 aa38.17■■■■□ 3.7
LSM10-203ENST00000489912 PRG4Q92954 1404 aaPredicted RBP38.17■■■■□ 3.7
LSM10-203ENST00000489912 FAM9AQ8IZU1 332 aaPredicted RBP38.04■■■■□ 3.68
LSM10-203ENST00000489912 IQGAP2Q13576 1575 aa38.02■■■■□ 3.68
LSM10-203ENST00000489912 CSRNP3Q8WYN3 585 aa38.01■■■■□ 3.68
LSM10-203ENST00000489912 PRXQ9BXM0 1461 aa38.01■■■■□ 3.67
LSM10-203ENST00000489912 EEA1Q15075 1411 aa37.97■■■■□ 3.67
LSM10-203ENST00000489912 CTTNBP2Q8WZ74 1663 aa37.94■■■■□ 3.66
LSM10-203ENST00000489912 TTBK1Q5TCY1 1321 aaPredicted RBP37.82■■■■□ 3.64
LSM10-203ENST00000489912 CARMIL2Q6F5E8 1435 aa37.81■■■■□ 3.64
LSM10-203ENST00000489912 UGGT2Q9NYU1 1516 aa37.76■■■■□ 3.63
LSM10-203ENST00000489912 DISP1Q96F81 1524 aa37.72■■■■□ 3.63
LSM10-203ENST00000489912 TRHP20396 242 aaPredicted RBP37.7■■■■□ 3.63
LSM10-203ENST00000489912 PTPRGP23470 1445 aa37.69■■■■□ 3.62
LSM10-203ENST00000489912 TNIKQ9UKE5 1360 aa37.68■■■■□ 3.62
LSM10-203ENST00000489912 KIAA0556O60303 1618 aa37.66■■■■□ 3.62
LSM10-203ENST00000489912 KIF21BO75037 1637 aa37.66■■■■□ 3.62
LSM10-203ENST00000489912 EHMT2Q96KQ7 1210 aa37.66■■■■□ 3.62
LSM10-203ENST00000489912 ADCY10Q96PN6 1610 aa37.61■■■■□ 3.61
LSM10-203ENST00000489912 GOLGA3Q08378 1498 aa37.56■■■■□ 3.6
LSM10-203ENST00000489912 RANGAP1P46060 587 aaPredicted RBP37.52■■■■□ 3.6
LSM10-203ENST00000489912 NPM1P06748 294 aaKnown RBP eCLIP37.51■■■■□ 3.6
LSM10-203ENST00000489912 P3H3Q8IVL6 736 aa37.45■■■■□ 3.59
LSM10-203ENST00000489912 UBTFP17480 764 aaKnown RBP37.43■■■■□ 3.58
LSM10-203ENST00000489912 UACAQ9BZF9 1416 aa37.42■■■■□ 3.58
LSM10-203ENST00000489912 SAMD9Q5K651 1589 aa37.36■■■■□ 3.57
LSM10-203ENST00000489912 ABCC2Q92887 1545 aa37.36■■■■□ 3.57
LSM10-203ENST00000489912 UHRF1BP1LA0JNW5 1464 aa37.33■■■■□ 3.57
LSM10-203ENST00000489912 PLB1Q6P1J6 1458 aa37.31■■■■□ 3.56
LSM10-203ENST00000489912 MAPKBP1O60336 1514 aa37.31■■■■□ 3.56
LSM10-203ENST00000489912 KIF13AQ9H1H9 1805 aa37.27■■■■□ 3.56
LSM10-203ENST00000489912 ABCA8O94911 1581 aa37.22■■■■□ 3.55
LSM10-203ENST00000489912 ZCCHC11Q5TAX3 1644 aaKnown RBP37.21■■■■□ 3.55
LSM10-203ENST00000489912 FHOD3Q2V2M9 1422 aa37.2■■■■□ 3.55
LSM10-203ENST00000489912 EFCAB5A4FU69 1503 aa37.17■■■■□ 3.54
LSM10-203ENST00000489912 KDM5BQ9UGL1 1544 aa37.17■■■■□ 3.54
LSM10-203ENST00000489912 ABCC10Q5T3U5 1492 aa37.16■■■■□ 3.54
LSM10-203ENST00000489912 FAM69CQ0P6D2 419 aa37.16■■■■□ 3.54
LSM10-203ENST00000489912 DIP2BQ9P265 1576 aa37.15■■■■□ 3.54
LSM10-203ENST00000489912 ASXL2Q76L83 1435 aa37.14■■■■□ 3.54
LSM10-203ENST00000489912 ARID3CA6NKF2 412 aa37.1■■■■□ 3.53
LSM10-203ENST00000489912 RAPGEF6Q8TEU7 1601 aa37.07■■■■□ 3.52
LSM10-203ENST00000489912 TSPOAP1O95153 1857 aa37.01■■■■□ 3.51
LSM10-203ENST00000489912 ARHGAP35Q9NRY4 1499 aa37■■■■□ 3.51
LSM10-203ENST00000489912 WDR7Q9Y4E6 1490 aa36.93■■■■□ 3.5
LSM10-203ENST00000489912 ATP10BO94823 1461 aa36.92■■■■□ 3.5
LSM10-203ENST00000489912 EPRSP07814 1512 aaKnown RBP36.9■■■■□ 3.5
LSM10-203ENST00000489912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.89■■■■□ 3.5
LSM10-203ENST00000489912 HNRNPUL2Q1KMD3 747 aaKnown RBP36.89■■■■□ 3.5
LSM10-203ENST00000489912 NUP153P49790 1475 aaKnown RBP36.88■■■■□ 3.5
LSM10-203ENST00000489912 GLI2P10070 1586 aa36.87■■■■□ 3.49
LSM10-203ENST00000489912 KCNH8Q96L42 1107 aa36.86■■■■□ 3.49
LSM10-203ENST00000489912 FMN1Q68DA7 1419 aa36.82■■■■□ 3.48
LSM10-203ENST00000489912 ATP1B4Q9UN42 357 aaPredicted RBP36.81■■■■□ 3.48
LSM10-203ENST00000489912 CLIP1P30622 1438 aa36.78■■■■□ 3.48
LSM10-203ENST00000489912 MAP3K4Q9Y6R4 1608 aa36.75■■■■□ 3.47
LSM10-203ENST00000489912 LOC105371045A0A1W2PR82 267 aa36.73■■■■□ 3.47
LSM10-203ENST00000489912 PPRC1Q5VV67 1664 aaKnown RBP36.73■■■■□ 3.47
LSM10-203ENST00000489912 HECW1Q76N89 1606 aa36.72■■■■□ 3.47
LSM10-203ENST00000489912 CDK13Q14004 1512 aaKnown RBP36.69■■■■□ 3.46
LSM10-203ENST00000489912 CFAP43Q8NDM7 1665 aa36.66■■■■□ 3.46
LSM10-203ENST00000489912 PLEKHD1A6NEE1 506 aa36.62■■■■□ 3.45
LSM10-203ENST00000489912 PCF11O94913 1555 aaKnown RBP36.61■■■■□ 3.45
LSM10-203ENST00000489912 KDM6BO15054 1643 aa36.61■■■■□ 3.45
LSM10-203ENST00000489912 CEP162Q5TB80 1403 aa36.6■■■■□ 3.45
LSM10-203ENST00000489912 CD109Q6YHK3 1445 aa36.6■■■■□ 3.45
LSM10-203ENST00000489912 LRRIQ1Q96JM4 1722 aa36.58■■■■□ 3.45
LSM10-203ENST00000489912 TEX14Q8IWB6 1497 aa36.56■■■■□ 3.44
LSM10-203ENST00000489912 CASKIN1Q8WXD9 1431 aa36.53■■■■□ 3.44
LSM10-203ENST00000489912 ABCA9Q8IUA7 1624 aa36.53■■■■□ 3.44
LSM10-203ENST00000489912 MAGI3Q5TCQ9 1506 aa36.48■■■■□ 3.43
LSM10-203ENST00000489912 FYCO1Q9BQS8 1478 aa36.45■■■■□ 3.43
LSM10-203ENST00000489912 CDK11AQ9UQ88 783 aaPredicted RBP36.43■■■■□ 3.42
LSM10-203ENST00000489912 CCDC18Q5T9S5 1454 aa36.4■■■■□ 3.42
LSM10-203ENST00000489912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.39■■■■□ 3.42
LSM10-203ENST00000489912 TTC37Q6PGP7 1564 aa36.38■■■■□ 3.41
LSM10-203ENST00000489912 COL17A1Q9UMD9 1497 aaPredicted RBP36.36■■■■□ 3.41
LSM10-203ENST00000489912 KIF14Q15058 1648 aa36.32■■■■□ 3.4
LSM10-203ENST00000489912 TROQ12816 1431 aaPredicted RBP36.32■■■■□ 3.4
LSM10-203ENST00000489912 MYO5CQ9NQX4 1742 aa36.21■■■■□ 3.39
LSM10-203ENST00000489912 NEO1Q92859 1461 aa36.2■■■■□ 3.39
LSM10-203ENST00000489912 FANCAO15360 1455 aa36.18■■■■□ 3.38
LSM10-203ENST00000489912 CFAP74Q9C0B2 1584 aa36.16■■■■□ 3.38
LSM10-203ENST00000489912 ARAP3Q8WWN8 1544 aa36.16■■■■□ 3.38
LSM10-203ENST00000489912 PHLDB1Q86UU1 1377 aa36.15■■■■□ 3.38
LSM10-203ENST00000489912 VPS8Q8N3P4 1428 aa36.14■■■■□ 3.38
LSM10-203ENST00000489912 PLCH2O75038 1416 aa36.12■■■■□ 3.37
LSM10-203ENST00000489912 AKNAQ7Z591 1439 aa36.1■■■■□ 3.37
LSM10-203ENST00000489912 RAPGEF3O95398 923 aa36.08■■■■□ 3.37
LSM10-203ENST00000489912 MTUS2Q5JR59 1369 aa36.07■■■■□ 3.36
LSM10-203ENST00000489912 ARHGAP5Q13017 1502 aa36.05■■■■□ 3.36
LSM10-203ENST00000489912 CDC42BPBQ9Y5S2 1711 aa36.03■■■■□ 3.36
LSM10-203ENST00000489912 EFCAB2Q5VUJ9 269 aa36.01■■■■□ 3.36
LSM10-203ENST00000489912 CDC42BPAQ5VT25 1732 aa36■■■■□ 3.35
LSM10-203ENST00000489912 FRMPD1Q5SYB0 1578 aa36■■■■□ 3.35
LSM10-203ENST00000489912 PREX2Q70Z35 1606 aa36■■■■□ 3.35
LSM10-203ENST00000489912 DENND4BO75064 1496 aaPredicted RBP35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms