RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
TRIM40-208ENST00000489892 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
TRIM40-208ENST00000489892 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
TRIM40-208ENST00000489892 MAGI1Q96QZ7 1491 aaPredicted RBP18.7■□□□□ 0.58
TRIM40-208ENST00000489892 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
TRIM40-208ENST00000489892 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
TRIM40-208ENST00000489892 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
TRIM40-208ENST00000489892 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
TRIM40-208ENST00000489892 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
TRIM40-208ENST00000489892 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
TRIM40-208ENST00000489892 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
TRIM40-208ENST00000489892 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
TRIM40-208ENST00000489892 CLIP1P30622 1438 aa18.5■□□□□ 0.55
TRIM40-208ENST00000489892 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
TRIM40-208ENST00000489892 EFCAB5A4FU69 1503 aa18.43■□□□□ 0.54
TRIM40-208ENST00000489892 KDM4FA0A1W2PPD8 638 aa18.41■□□□□ 0.54
TRIM40-208ENST00000489892 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
TRIM40-208ENST00000489892 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
TRIM40-208ENST00000489892 NUP160Q12769 1436 aa18.38■□□□□ 0.53
TRIM40-208ENST00000489892 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
TRIM40-208ENST00000489892 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
TRIM40-208ENST00000489892 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
TRIM40-208ENST00000489892 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
TRIM40-208ENST00000489892 UGGT2Q9NYU1 1516 aa18.32■□□□□ 0.52
TRIM40-208ENST00000489892 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
TRIM40-208ENST00000489892 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
TRIM40-208ENST00000489892 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
TRIM40-208ENST00000489892 FMN1Q68DA7 1419 aa18.25■□□□□ 0.51
TRIM40-208ENST00000489892 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
TRIM40-208ENST00000489892 APLP2Q06481 763 aa18.22■□□□□ 0.51
TRIM40-208ENST00000489892 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
TRIM40-208ENST00000489892 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
TRIM40-208ENST00000489892 KIAA0556O60303 1618 aa18.19■□□□□ 0.5
TRIM40-208ENST00000489892 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
TRIM40-208ENST00000489892 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
TRIM40-208ENST00000489892 FYCO1Q9BQS8 1478 aa18.15■□□□□ 0.5
TRIM40-208ENST00000489892 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
TRIM40-208ENST00000489892 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
TRIM40-208ENST00000489892 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
TRIM40-208ENST00000489892 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
TRIM40-208ENST00000489892 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
TRIM40-208ENST00000489892 LMTK3Q96Q04 1460 aa18.11■□□□□ 0.49
TRIM40-208ENST00000489892 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
TRIM40-208ENST00000489892 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.49
TRIM40-208ENST00000489892 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRIM40-208ENST00000489892 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
TRIM40-208ENST00000489892 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
TRIM40-208ENST00000489892 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
TRIM40-208ENST00000489892 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
TRIM40-208ENST00000489892 SOCS7O14512 581 aa18.02■□□□□ 0.48
TRIM40-208ENST00000489892 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
TRIM40-208ENST00000489892 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
TRIM40-208ENST00000489892 TIAM1Q13009 1591 aa18■□□□□ 0.47
TRIM40-208ENST00000489892 CFAP43Q8NDM7 1665 aa18■□□□□ 0.47
TRIM40-208ENST00000489892 PTPRGP23470 1445 aa18■□□□□ 0.47
TRIM40-208ENST00000489892 RAPGEF6Q8TEU7 1601 aa17.99■□□□□ 0.47
TRIM40-208ENST00000489892 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
TRIM40-208ENST00000489892 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
TRIM40-208ENST00000489892 ILDR2Q71H61 639 aa17.96■□□□□ 0.47
TRIM40-208ENST00000489892 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
TRIM40-208ENST00000489892 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
TRIM40-208ENST00000489892 ABCA8O94911 1581 aa17.93■□□□□ 0.46
TRIM40-208ENST00000489892 KDM6BO15054 1643 aa17.93■□□□□ 0.46
TRIM40-208ENST00000489892 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
TRIM40-208ENST00000489892 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
TRIM40-208ENST00000489892 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
TRIM40-208ENST00000489892 UACAQ9BZF9 1416 aa17.9■□□□□ 0.46
TRIM40-208ENST00000489892 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
TRIM40-208ENST00000489892 TTBK1Q5TCY1 1321 aaPredicted RBP17.9■□□□□ 0.46
TRIM40-208ENST00000489892 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
TRIM40-208ENST00000489892 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
TRIM40-208ENST00000489892 PLB1Q6P1J6 1458 aa17.89■□□□□ 0.45
TRIM40-208ENST00000489892 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
TRIM40-208ENST00000489892 HRCP23327 699 aa17.88■□□□□ 0.45
TRIM40-208ENST00000489892 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
TRIM40-208ENST00000489892 ABCC2Q92887 1545 aa17.86■□□□□ 0.45
TRIM40-208ENST00000489892 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
TRIM40-208ENST00000489892 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
TRIM40-208ENST00000489892 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
TRIM40-208ENST00000489892 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
TRIM40-208ENST00000489892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
TRIM40-208ENST00000489892 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
TRIM40-208ENST00000489892 CDK13Q14004 1512 aaKnown RBP17.81■□□□□ 0.44
TRIM40-208ENST00000489892 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
TRIM40-208ENST00000489892 ATP10BO94823 1461 aa17.77■□□□□ 0.44
TRIM40-208ENST00000489892 TROQ12816 1431 aaPredicted RBP17.77■□□□□ 0.44
TRIM40-208ENST00000489892 PLEKHD1A6NEE1 506 aa17.76■□□□□ 0.43
TRIM40-208ENST00000489892 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
TRIM40-208ENST00000489892 KDM5BQ9UGL1 1544 aa17.74■□□□□ 0.43
TRIM40-208ENST00000489892 NCOA2Q15596 1464 aa17.74■□□□□ 0.43
TRIM40-208ENST00000489892 GLI2P10070 1586 aa17.74■□□□□ 0.43
TRIM40-208ENST00000489892 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
TRIM40-208ENST00000489892 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
TRIM40-208ENST00000489892 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
TRIM40-208ENST00000489892 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
TRIM40-208ENST00000489892 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
TRIM40-208ENST00000489892 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
TRIM40-208ENST00000489892 KIF14Q15058 1648 aa17.7■□□□□ 0.42
TRIM40-208ENST00000489892 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
TRIM40-208ENST00000489892 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms