RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
MVB12B-206ENST00000489637 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
MVB12B-206ENST00000489637 WDR97A6NE52 1622 aa22.91■■□□□ 1.26
MVB12B-206ENST00000489637 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
MVB12B-206ENST00000489637 FBLN2P98095 1184 aa22.9■■□□□ 1.26
MVB12B-206ENST00000489637 ABCA5Q8WWZ7 1642 aa22.89■■□□□ 1.25
MVB12B-206ENST00000489637 CUL7Q14999 1698 aa22.81■■□□□ 1.24
MVB12B-206ENST00000489637 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
MVB12B-206ENST00000489637 PCF11O94913 1555 aaKnown RBP22.75■■□□□ 1.23
MVB12B-206ENST00000489637 WDR62O43379 1518 aa22.71■■□□□ 1.23
MVB12B-206ENST00000489637 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.23
MVB12B-206ENST00000489637 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.23
MVB12B-206ENST00000489637 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
MVB12B-206ENST00000489637 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
MVB12B-206ENST00000489637 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
MVB12B-206ENST00000489637 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
MVB12B-206ENST00000489637 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
MVB12B-206ENST00000489637 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
MVB12B-206ENST00000489637 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
MVB12B-206ENST00000489637 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
MVB12B-206ENST00000489637 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
MVB12B-206ENST00000489637 ADAMTS12P58397 1594 aa22.6■■□□□ 1.21
MVB12B-206ENST00000489637 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
MVB12B-206ENST00000489637 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
MVB12B-206ENST00000489637 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
MVB12B-206ENST00000489637 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
MVB12B-206ENST00000489637 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
MVB12B-206ENST00000489637 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
MVB12B-206ENST00000489637 MTUS2Q5JR59 1369 aa22.56■■□□□ 1.2
MVB12B-206ENST00000489637 FYCO1Q9BQS8 1478 aa22.53■■□□□ 1.2
MVB12B-206ENST00000489637 IQGAP2Q13576 1575 aa22.51■■□□□ 1.19
MVB12B-206ENST00000489637 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
MVB12B-206ENST00000489637 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
MVB12B-206ENST00000489637 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
MVB12B-206ENST00000489637 LRRIQ1Q96JM4 1722 aa22.46■■□□□ 1.19
MVB12B-206ENST00000489637 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
MVB12B-206ENST00000489637 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
MVB12B-206ENST00000489637 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
MVB12B-206ENST00000489637 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
MVB12B-206ENST00000489637 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
MVB12B-206ENST00000489637 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
MVB12B-206ENST00000489637 MAGI3Q5TCQ9 1506 aa22.4■■□□□ 1.18
MVB12B-206ENST00000489637 KIAA0586Q9BVV6 1533 aa22.39■■□□□ 1.18
MVB12B-206ENST00000489637 DISP1Q96F81 1524 aa22.38■■□□□ 1.17
MVB12B-206ENST00000489637 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
MVB12B-206ENST00000489637 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
MVB12B-206ENST00000489637 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
MVB12B-206ENST00000489637 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
MVB12B-206ENST00000489637 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.17
MVB12B-206ENST00000489637 SIN3AQ96ST3 1273 aa22.33■■□□□ 1.17
MVB12B-206ENST00000489637 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.16
MVB12B-206ENST00000489637 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
MVB12B-206ENST00000489637 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
MVB12B-206ENST00000489637 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
MVB12B-206ENST00000489637 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
MVB12B-206ENST00000489637 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
MVB12B-206ENST00000489637 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
MVB12B-206ENST00000489637 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
MVB12B-206ENST00000489637 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
MVB12B-206ENST00000489637 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
MVB12B-206ENST00000489637 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
MVB12B-206ENST00000489637 ZNF777Q9ULD5 760 aaPredicted RBP22.23■■□□□ 1.15
MVB12B-206ENST00000489637 MYOM3Q5VTT5 1437 aa22.23■■□□□ 1.15
MVB12B-206ENST00000489637 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
MVB12B-206ENST00000489637 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
MVB12B-206ENST00000489637 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
MVB12B-206ENST00000489637 PRG4Q92954 1404 aaPredicted RBP22.2■■□□□ 1.14
MVB12B-206ENST00000489637 NUP160Q12769 1436 aa22.18■■□□□ 1.14
MVB12B-206ENST00000489637 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
MVB12B-206ENST00000489637 SUPT6HQ7KZ85 1726 aaKnown RBP22.16■■□□□ 1.14
MVB12B-206ENST00000489637 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
MVB12B-206ENST00000489637 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
MVB12B-206ENST00000489637 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
MVB12B-206ENST00000489637 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
MVB12B-206ENST00000489637 RAPGEF6Q8TEU7 1601 aa22.11■■□□□ 1.13
MVB12B-206ENST00000489637 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
MVB12B-206ENST00000489637 PTPN23Q9H3S7 1636 aa22.1■■□□□ 1.13
MVB12B-206ENST00000489637 FOXD1Q16676 465 aa22.09■■□□□ 1.13
MVB12B-206ENST00000489637 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
MVB12B-206ENST00000489637 CFDP1Q9UEE9 299 aaPredicted RBP22.06■■□□□ 1.12
MVB12B-206ENST00000489637 CHD1O14646 1710 aa22.05■■□□□ 1.12
MVB12B-206ENST00000489637 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
MVB12B-206ENST00000489637 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
MVB12B-206ENST00000489637 PTPRGP23470 1445 aa22.04■■□□□ 1.12
MVB12B-206ENST00000489637 NAIPQ13075 1403 aa22.04■■□□□ 1.12
MVB12B-206ENST00000489637 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
MVB12B-206ENST00000489637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
MVB12B-206ENST00000489637 MIER1Q8N108 512 aa22.03■■□□□ 1.12
MVB12B-206ENST00000489637 KCNH8Q96L42 1107 aa22■■□□□ 1.11
MVB12B-206ENST00000489637 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
MVB12B-206ENST00000489637 ATP10BO94823 1461 aa21.98■■□□□ 1.11
MVB12B-206ENST00000489637 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
MVB12B-206ENST00000489637 KIF14Q15058 1648 aa21.97■■□□□ 1.11
MVB12B-206ENST00000489637 KDM6BO15054 1643 aa21.96■■□□□ 1.11
MVB12B-206ENST00000489637 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
MVB12B-206ENST00000489637 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.11e-7■■■■■ 28.5
MVB12B-206ENST00000489637 ABCC5O15440 1437 aa21.91■■□□□ 1.1
MVB12B-206ENST00000489637 TCOF1Q13428 1488 aaKnown RBP21.91■■□□□ 1.1
MVB12B-206ENST00000489637 MIA2Q96PC5 1412 aa21.89■■□□□ 1.1
MVB12B-206ENST00000489637 GPATCH8Q9UKJ3 1502 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms