RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
CNIH3-209ENST00000489556 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
CNIH3-209ENST00000489556 GRIN2AQ12879 1464 aa14.03□□□□□ -0.16
CNIH3-209ENST00000489556 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.17
CNIH3-209ENST00000489556 ADRA2BP18089 450 aa13.99□□□□□ -0.17
CNIH3-209ENST00000489556 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
CNIH3-209ENST00000489556 KIF21BO75037 1637 aa13.97□□□□□ -0.17
CNIH3-209ENST00000489556 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.17
CNIH3-209ENST00000489556 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
CNIH3-209ENST00000489556 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
CNIH3-209ENST00000489556 LOC105371045A0A1W2PR82 267 aa13.91□□□□□ -0.18
CNIH3-209ENST00000489556 NUP160Q12769 1436 aa13.9□□□□□ -0.18
CNIH3-209ENST00000489556 CTTNBP2Q8WZ74 1663 aa13.9□□□□□ -0.18
CNIH3-209ENST00000489556 KIAA0586Q9BVV6 1533 aa13.89□□□□□ -0.19
CNIH3-209ENST00000489556 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
CNIH3-209ENST00000489556 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
CNIH3-209ENST00000489556 CLASP1Q7Z460 1538 aa13.85□□□□□ -0.19
CNIH3-209ENST00000489556 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
CNIH3-209ENST00000489556 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
CNIH3-209ENST00000489556 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
CNIH3-209ENST00000489556 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
CNIH3-209ENST00000489556 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
CNIH3-209ENST00000489556 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
CNIH3-209ENST00000489556 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
CNIH3-209ENST00000489556 UGGT2Q9NYU1 1516 aa13.75□□□□□ -0.21
CNIH3-209ENST00000489556 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
CNIH3-209ENST00000489556 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
CNIH3-209ENST00000489556 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
CNIH3-209ENST00000489556 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
CNIH3-209ENST00000489556 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
CNIH3-209ENST00000489556 CLIP1P30622 1438 aa13.72□□□□□ -0.21
CNIH3-209ENST00000489556 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.21
CNIH3-209ENST00000489556 KIAA0556O60303 1618 aa13.71□□□□□ -0.22
CNIH3-209ENST00000489556 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
CNIH3-209ENST00000489556 CEP162Q5TB80 1403 aa13.7□□□□□ -0.22
CNIH3-209ENST00000489556 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
CNIH3-209ENST00000489556 DISP1Q96F81 1524 aa13.69□□□□□ -0.22
CNIH3-209ENST00000489556 PTPRGP23470 1445 aa13.69□□□□□ -0.22
CNIH3-209ENST00000489556 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
CNIH3-209ENST00000489556 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
CNIH3-209ENST00000489556 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
CNIH3-209ENST00000489556 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
CNIH3-209ENST00000489556 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
CNIH3-209ENST00000489556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
CNIH3-209ENST00000489556 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
CNIH3-209ENST00000489556 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
CNIH3-209ENST00000489556 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
CNIH3-209ENST00000489556 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
CNIH3-209ENST00000489556 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
CNIH3-209ENST00000489556 APLP2Q06481 763 aa13.56□□□□□ -0.24
CNIH3-209ENST00000489556 RAPGEF6Q8TEU7 1601 aa13.55□□□□□ -0.24
CNIH3-209ENST00000489556 ABCC2Q92887 1545 aa13.52□□□□□ -0.25
CNIH3-209ENST00000489556 ABCA8O94911 1581 aa13.52□□□□□ -0.25
CNIH3-209ENST00000489556 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
CNIH3-209ENST00000489556 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
CNIH3-209ENST00000489556 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
CNIH3-209ENST00000489556 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
CNIH3-209ENST00000489556 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
CNIH3-209ENST00000489556 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
CNIH3-209ENST00000489556 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
CNIH3-209ENST00000489556 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
CNIH3-209ENST00000489556 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
CNIH3-209ENST00000489556 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
CNIH3-209ENST00000489556 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.26
CNIH3-209ENST00000489556 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
CNIH3-209ENST00000489556 ATP10BO94823 1461 aa13.44□□□□□ -0.26
CNIH3-209ENST00000489556 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
CNIH3-209ENST00000489556 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
CNIH3-209ENST00000489556 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
CNIH3-209ENST00000489556 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
CNIH3-209ENST00000489556 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
CNIH3-209ENST00000489556 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
CNIH3-209ENST00000489556 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
CNIH3-209ENST00000489556 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
CNIH3-209ENST00000489556 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
CNIH3-209ENST00000489556 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
CNIH3-209ENST00000489556 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
CNIH3-209ENST00000489556 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
CNIH3-209ENST00000489556 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
CNIH3-209ENST00000489556 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
CNIH3-209ENST00000489556 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
CNIH3-209ENST00000489556 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
CNIH3-209ENST00000489556 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
CNIH3-209ENST00000489556 KIF14Q15058 1648 aa13.3□□□□□ -0.28
CNIH3-209ENST00000489556 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
CNIH3-209ENST00000489556 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
CNIH3-209ENST00000489556 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
CNIH3-209ENST00000489556 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
CNIH3-209ENST00000489556 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.28
CNIH3-209ENST00000489556 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
CNIH3-209ENST00000489556 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CNIH3-209ENST00000489556 DIP2BQ9P265 1576 aa13.26□□□□□ -0.29
CNIH3-209ENST00000489556 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
CNIH3-209ENST00000489556 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
CNIH3-209ENST00000489556 ZNF777Q9ULD5 760 aaPredicted RBP13.24□□□□□ -0.29
CNIH3-209ENST00000489556 GLI2P10070 1586 aa13.24□□□□□ -0.29
CNIH3-209ENST00000489556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
CNIH3-209ENST00000489556 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
CNIH3-209ENST00000489556 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
CNIH3-209ENST00000489556 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms