RNA–Protein interactions for RNA: ENST00000489549.5

GABPB2-206, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

TSL 3

Gene GABPB2, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-206ENST00000489549 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
GABPB2-206ENST00000489549 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
GABPB2-206ENST00000489549 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
GABPB2-206ENST00000489549 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
GABPB2-206ENST00000489549 PRXQ9BXM0 1461 aa24.08■■□□□ 1.45
GABPB2-206ENST00000489549 IQGAP2Q13576 1575 aa24.07■■□□□ 1.44
GABPB2-206ENST00000489549 EEA1Q15075 1411 aa24.02■■□□□ 1.44
GABPB2-206ENST00000489549 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
GABPB2-206ENST00000489549 CTTNBP2Q8WZ74 1663 aa23.96■■□□□ 1.43
GABPB2-206ENST00000489549 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
GABPB2-206ENST00000489549 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
GABPB2-206ENST00000489549 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
GABPB2-206ENST00000489549 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
GABPB2-206ENST00000489549 TNIKQ9UKE5 1360 aa23.89■■□□□ 1.41
GABPB2-206ENST00000489549 ADCY10Q96PN6 1610 aa23.88■■□□□ 1.41
GABPB2-206ENST00000489549 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
GABPB2-206ENST00000489549 PTPRGP23470 1445 aa23.85■■□□□ 1.41
GABPB2-206ENST00000489549 TRHP20396 242 aaPredicted RBP23.82■■□□□ 1.4
GABPB2-206ENST00000489549 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
GABPB2-206ENST00000489549 KIF21BO75037 1637 aa23.79■■□□□ 1.4
GABPB2-206ENST00000489549 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
GABPB2-206ENST00000489549 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
GABPB2-206ENST00000489549 UACAQ9BZF9 1416 aa23.73■■□□□ 1.39
GABPB2-206ENST00000489549 ABCC2Q92887 1545 aa23.72■■□□□ 1.39
GABPB2-206ENST00000489549 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
GABPB2-206ENST00000489549 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
GABPB2-206ENST00000489549 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
GABPB2-206ENST00000489549 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
GABPB2-206ENST00000489549 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
GABPB2-206ENST00000489549 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
GABPB2-206ENST00000489549 DIP2BQ9P265 1576 aa23.64■■□□□ 1.37
GABPB2-206ENST00000489549 ABCA8O94911 1581 aa23.62■■□□□ 1.37
GABPB2-206ENST00000489549 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
GABPB2-206ENST00000489549 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
GABPB2-206ENST00000489549 ZCCHC11Q5TAX3 1644 aaKnown RBP23.56■■□□□ 1.36
GABPB2-206ENST00000489549 ASXL2Q76L83 1435 aa23.55■■□□□ 1.36
GABPB2-206ENST00000489549 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
GABPB2-206ENST00000489549 GLI2P10070 1586 aa23.52■■□□□ 1.36
GABPB2-206ENST00000489549 FAM69CQ0P6D2 419 aa23.51■■□□□ 1.35
GABPB2-206ENST00000489549 EPRSP07814 1512 aaKnown RBP23.44■■□□□ 1.34
GABPB2-206ENST00000489549 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
GABPB2-206ENST00000489549 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
GABPB2-206ENST00000489549 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
GABPB2-206ENST00000489549 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
GABPB2-206ENST00000489549 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
GABPB2-206ENST00000489549 ATP10BO94823 1461 aa23.38■■□□□ 1.33
GABPB2-206ENST00000489549 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
GABPB2-206ENST00000489549 PPRC1Q5VV67 1664 aaKnown RBP23.36■■□□□ 1.33
GABPB2-206ENST00000489549 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
GABPB2-206ENST00000489549 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
GABPB2-206ENST00000489549 RANGAP1P46060 587 aaPredicted RBP23.32■■□□□ 1.32
GABPB2-206ENST00000489549 TSPOAP1O95153 1857 aa23.3■■□□□ 1.32
GABPB2-206ENST00000489549 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
GABPB2-206ENST00000489549 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
GABPB2-206ENST00000489549 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
GABPB2-206ENST00000489549 KDM6BO15054 1643 aa23.26■■□□□ 1.31
GABPB2-206ENST00000489549 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
GABPB2-206ENST00000489549 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
GABPB2-206ENST00000489549 ABCA9Q8IUA7 1624 aa23.21■■□□□ 1.31
GABPB2-206ENST00000489549 HECW1Q76N89 1606 aa23.2■■□□□ 1.3
GABPB2-206ENST00000489549 CD109Q6YHK3 1445 aa23.19■■□□□ 1.3
GABPB2-206ENST00000489549 ARID3CA6NKF2 412 aa23.18■■□□□ 1.3
GABPB2-206ENST00000489549 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
GABPB2-206ENST00000489549 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
GABPB2-206ENST00000489549 CLIP1P30622 1438 aa23.12■■□□□ 1.29
GABPB2-206ENST00000489549 COL17A1Q9UMD9 1497 aaPredicted RBP23.11■■□□□ 1.29
GABPB2-206ENST00000489549 PLEKHD1A6NEE1 506 aa23.1■■□□□ 1.29
GABPB2-206ENST00000489549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
GABPB2-206ENST00000489549 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
GABPB2-206ENST00000489549 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
GABPB2-206ENST00000489549 LRRIQ1Q96JM4 1722 aa23.07■■□□□ 1.28
GABPB2-206ENST00000489549 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
GABPB2-206ENST00000489549 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
GABPB2-206ENST00000489549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
GABPB2-206ENST00000489549 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
GABPB2-206ENST00000489549 ARAP3Q8WWN8 1544 aa23.04■■□□□ 1.28
GABPB2-206ENST00000489549 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
GABPB2-206ENST00000489549 NEO1Q92859 1461 aa23.03■■□□□ 1.28
GABPB2-206ENST00000489549 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
GABPB2-206ENST00000489549 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
GABPB2-206ENST00000489549 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
GABPB2-206ENST00000489549 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
GABPB2-206ENST00000489549 CFAP74Q9C0B2 1584 aa22.95■■□□□ 1.26
GABPB2-206ENST00000489549 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
GABPB2-206ENST00000489549 KIF14Q15058 1648 aa22.93■■□□□ 1.26
GABPB2-206ENST00000489549 PLCH2O75038 1416 aa22.91■■□□□ 1.26
GABPB2-206ENST00000489549 FANCAO15360 1455 aa22.9■■□□□ 1.26
GABPB2-206ENST00000489549 FRMPD1Q5SYB0 1578 aa22.88■■□□□ 1.25
GABPB2-206ENST00000489549 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
GABPB2-206ENST00000489549 AKNAQ7Z591 1439 aa22.87■■□□□ 1.25
GABPB2-206ENST00000489549 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
GABPB2-206ENST00000489549 RICTORQ6R327 1708 aa22.82■■□□□ 1.24
GABPB2-206ENST00000489549 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
GABPB2-206ENST00000489549 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
GABPB2-206ENST00000489549 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
GABPB2-206ENST00000489549 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
GABPB2-206ENST00000489549 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
GABPB2-206ENST00000489549 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.23
GABPB2-206ENST00000489549 KDM4FA0A1W2PPD8 638 aa22.76■■□□□ 1.23
GABPB2-206ENST00000489549 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms